RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 POLR2BP30876 1174 aaKnown RBP6.66□□□□□ -1.34
SMCHD1-206ENST00000581631 PWP1Q13610 501 aa6.66□□□□□ -1.34
SMCHD1-206ENST00000581631 SNAP47Q5SQN1 464 aa6.66□□□□□ -1.34
SMCHD1-206ENST00000581631 CDCP2Q5VXM1 449 aa6.66□□□□□ -1.34
SMCHD1-206ENST00000581631 OVOS1Q6IE37 1185 aa6.66□□□□□ -1.34
SMCHD1-206ENST00000581631 SND1Q7KZF4 910 aaKnown RBP eCLIP6.66□□□□□ -1.34
SMCHD1-206ENST00000581631 ERMP1Q7Z2K6 904 aa6.66□□□□□ -1.34
SMCHD1-206ENST00000581631 SLCO6A1Q86UG4 719 aa6.66□□□□□ -1.34
SMCHD1-206ENST00000581631 FEZF2Q8TBJ5 459 aa6.66□□□□□ -1.34
SMCHD1-206ENST00000581631 GMIPQ9P107 970 aa6.66□□□□□ -1.34
SMCHD1-206ENST00000581631 TNFRSF10DQ9UBN6 386 aa6.66□□□□□ -1.34
SMCHD1-206ENST00000581631 MINPP1Q9UNW1 487 aa6.66□□□□□ -1.34
SMCHD1-206ENST00000581631 GREM1O60565 184 aa6.65□□□□□ -1.34
SMCHD1-206ENST00000581631 FKTNO75072 461 aa6.65□□□□□ -1.34
SMCHD1-206ENST00000581631 RTP1P59025 263 aa6.65□□□□□ -1.34
SMCHD1-206ENST00000581631 FBXL19Q6PCT2 694 aa6.65□□□□□ -1.34
SMCHD1-206ENST00000581631 TP53I13Q8NBR0 393 aaPredicted RBP6.65□□□□□ -1.34
SMCHD1-206ENST00000581631 PRDM14Q9GZV8 571 aa6.65□□□□□ -1.34
SMCHD1-206ENST00000581631 CNNM2Q9H8M5 875 aa6.65□□□□□ -1.34
SMCHD1-206ENST00000581631 TNFRSF12AQ9NP84 129 aa6.65□□□□□ -1.34
SMCHD1-206ENST00000581631 ERVK13-1Q9NX77 482 aa6.65□□□□□ -1.34
SMCHD1-206ENST00000581631 GPR55Q9Y2T6 319 aaPredicted RBP6.65□□□□□ -1.34
SMCHD1-206ENST00000581631 PCDHA5Q9Y5H7 936 aa6.65□□□□□ -1.34
SMCHD1-206ENST00000581631 PATL2C9JE40 543 aaKnown RBP6.64□□□□□ -1.35
SMCHD1-206ENST00000581631 ABLIM1O14639 778 aa6.64□□□□□ -1.35
SMCHD1-206ENST00000581631 SASH1O94885 1247 aa6.64□□□□□ -1.35
SMCHD1-206ENST00000581631 RAG1P15918 1043 aa6.64□□□□□ -1.35
SMCHD1-206ENST00000581631 XPCQ01831 940 aaPredicted RBP6.64□□□□□ -1.35
SMCHD1-206ENST00000581631 VMACQ2NL98 169 aa6.64□□□□□ -1.35
SMCHD1-206ENST00000581631 GALNT18Q6P9A2 607 aa6.64□□□□□ -1.35
SMCHD1-206ENST00000581631 LDHDQ86WU2 507 aa6.64□□□□□ -1.35
SMCHD1-206ENST00000581631 BRMS1Q9HCU9 246 aa6.64□□□□□ -1.35
SMCHD1-206ENST00000581631 LUC7LQ9NQ29 371 aaKnown RBP6.64□□□□□ -1.35
SMCHD1-206ENST00000581631 ACSL6Q9UKU0 697 aa6.64□□□□□ -1.35
SMCHD1-206ENST00000581631 PCDHB14Q9Y5E9 798 aa6.64□□□□□ -1.35
SMCHD1-206ENST00000581631 ROBO2Q9HCK4 1378 aa6.64□□□□□ -1.35
SMCHD1-206ENST00000581631 MINDY4BA8MYZ0 360 aa6.63□□□□□ -1.35
SMCHD1-206ENST00000581631 TLR3O15455 904 aaKnown RBP6.63□□□□□ -1.35
SMCHD1-206ENST00000581631 ZNF205O95201 554 aa6.63□□□□□ -1.35
SMCHD1-206ENST00000581631 CTSKP43235 329 aa6.63□□□□□ -1.35
SMCHD1-206ENST00000581631 CBX2Q14781 532 aaPredicted RBP6.63□□□□□ -1.35
SMCHD1-206ENST00000581631 CNKSR3Q6P9H4 555 aa6.63□□□□□ -1.35
SMCHD1-206ENST00000581631 DBX2Q6ZNG2 339 aa6.63□□□□□ -1.35
SMCHD1-206ENST00000581631 ERICH6Q7L0X2 663 aa6.63□□□□□ -1.35
SMCHD1-206ENST00000581631 SP8Q8IXZ3 490 aa6.63□□□□□ -1.35
SMCHD1-206ENST00000581631 LINC01356Q8N9X3 169 aa6.63□□□□□ -1.35
SMCHD1-206ENST00000581631 SYT8Q8NBV8 401 aa6.63□□□□□ -1.35
SMCHD1-206ENST00000581631 EHMT1Q9H9B1 1298 aa6.63□□□□□ -1.35
SMCHD1-206ENST00000581631 KBTBD4Q9NVX7 518 aa6.63□□□□□ -1.35
SMCHD1-206ENST00000581631 IRS2Q9Y4H2 1338 aa6.62□□□□□ -1.35
SMCHD1-206ENST00000581631 SORBS3O60504 671 aa6.62□□□□□ -1.35
SMCHD1-206ENST00000581631 IGFBP6P24592 240 aaPredicted RBP6.62□□□□□ -1.35
SMCHD1-206ENST00000581631 CRKP46108 304 aa6.62□□□□□ -1.35
SMCHD1-206ENST00000581631 CAP1Q01518 475 aa6.62□□□□□ -1.35
SMCHD1-206ENST00000581631 TAGLNQ01995 201 aaKnown RBP6.62□□□□□ -1.35
SMCHD1-206ENST00000581631 LAPTM5Q13571 262 aa6.62□□□□□ -1.35
SMCHD1-206ENST00000581631 OLFML2BQ68BL8 750 aa6.62□□□□□ -1.35
SMCHD1-206ENST00000581631 GGNQ86UU5 652 aa6.62□□□□□ -1.35
SMCHD1-206ENST00000581631 TMEM52Q8NDY8 209 aa6.62□□□□□ -1.35
SMCHD1-206ENST00000581631 ATG4CQ96DT6 458 aa6.62□□□□□ -1.35
SMCHD1-206ENST00000581631 TEPSINQ96N21 525 aa6.62□□□□□ -1.35
SMCHD1-206ENST00000581631 COPRSQ9NQ92 184 aa6.62□□□□□ -1.35
SMCHD1-206ENST00000581631 CHST7Q9NS84 486 aa6.62□□□□□ -1.35
SMCHD1-206ENST00000581631 WTIPA6NIX2 430 aaPredicted RBP6.61□□□□□ -1.35
SMCHD1-206ENST00000581631 MPOP05164 745 aa6.61□□□□□ -1.35
SMCHD1-206ENST00000581631 CELA3BP08861 270 aa6.61□□□□□ -1.35
SMCHD1-206ENST00000581631 BMP8BP34820 402 aa6.61□□□□□ -1.35
SMCHD1-206ENST00000581631 CCNFP41002 786 aa6.61□□□□□ -1.35
SMCHD1-206ENST00000581631 RAD51AP2Q09MP3 1159 aa6.61□□□□□ -1.35
SMCHD1-206ENST00000581631 MLECQ14165 292 aa6.61□□□□□ -1.35
SMCHD1-206ENST00000581631 CWF19L2Q2TBE0 894 aaKnown RBP6.61□□□□□ -1.35
SMCHD1-206ENST00000581631 TMC6Q7Z403 805 aa6.61□□□□□ -1.35
SMCHD1-206ENST00000581631 PRRT2Q7Z6L0 340 aaPredicted RBP6.61□□□□□ -1.35
SMCHD1-206ENST00000581631 ZNF512BQ96KM6 892 aaPredicted RBP6.61□□□□□ -1.35
SMCHD1-206ENST00000581631 TAF6LQ9Y6J9 622 aa6.61□□□□□ -1.35
SMCHD1-206ENST00000581631 A0A1W2PQ45 241 aaPredicted RBP6.6□□□□□ -1.35
SMCHD1-206ENST00000581631 A0A1W2PQY0 241 aa6.6□□□□□ -1.35
SMCHD1-206ENST00000581631 SSU72P8A0A1W2PR75 194 aa6.6□□□□□ -1.35
SMCHD1-206ENST00000581631 CHMP4BP1P59074 171 aa6.6□□□□□ -1.35
SMCHD1-206ENST00000581631 EFEMP1Q12805 493 aa6.6□□□□□ -1.35
SMCHD1-206ENST00000581631 NLRC3Q7RTR2 1065 aa6.6□□□□□ -1.35
SMCHD1-206ENST00000581631 TMEM192Q8IY95 271 aa6.6□□□□□ -1.35
SMCHD1-206ENST00000581631 ADAM7Q9H2U9 754 aa6.6□□□□□ -1.35
SMCHD1-206ENST00000581631 TIMELESSQ9UNS1 1208 aa6.6□□□□□ -1.35
SMCHD1-206ENST00000581631 ZC3H12DA2A288 527 aaKnown RBP6.59□□□□□ -1.35
SMCHD1-206ENST00000581631 MEIS3P2A8K0S8 358 aa6.59□□□□□ -1.35
SMCHD1-206ENST00000581631 TNFRSF10CO14798 259 aa6.59□□□□□ -1.35
SMCHD1-206ENST00000581631 FFAR3O14843 346 aa6.59□□□□□ -1.35
SMCHD1-206ENST00000581631 CLEC3AO75596 197 aa6.59□□□□□ -1.35
SMCHD1-206ENST00000581631 PRKCAP17252 672 aa6.59□□□□□ -1.35
SMCHD1-206ENST00000581631 FBLN1P23142 703 aa6.59□□□□□ -1.35
SMCHD1-206ENST00000581631 RTP2Q5QGT7 225 aa6.59□□□□□ -1.35
SMCHD1-206ENST00000581631 RPTNQ6XPR3 784 aa6.59□□□□□ -1.35
SMCHD1-206ENST00000581631 FRMD5Q7Z6J6 570 aa6.59□□□□□ -1.35
SMCHD1-206ENST00000581631 ZDHHC14Q8IZN3 488 aa6.59□□□□□ -1.35
SMCHD1-206ENST00000581631 PRR13Q9NZ81 148 aa6.59□□□□□ -1.35
SMCHD1-206ENST00000581631 SUPT16HQ9Y5B9 1047 aaKnown RBP6.59□□□□□ -1.35
SMCHD1-206ENST00000581631 ADRB1P08588 477 aa6.58□□□□□ -1.36
SMCHD1-206ENST00000581631 ENDOUP21128 410 aaKnown RBP6.58□□□□□ -1.36
SMCHD1-206ENST00000581631 EIF4A3P38919 411 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms