RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 FGD4Q96M96 766 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 CCDC113Q9H0I3 377 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 USP35Q9P2H5 1018 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 SUGT1Q9Y2Z0 365 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 MSRB2Q9Y3D2 182 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 PCDHA11Q9Y5I1 949 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 SSU72P8A0A1W2PR75 194 aa3.41□□□□□ -1.86
PTP4A1-204ENST00000578299 AGRPO00253 132 aa3.41□□□□□ -1.86
PTP4A1-204ENST00000578299 ADAMTS4O75173 837 aa3.41□□□□□ -1.86
PTP4A1-204ENST00000578299 ENDOUP21128 410 aaKnown RBP3.41□□□□□ -1.86
PTP4A1-204ENST00000578299 PCBP3P57721 371 aaKnown RBP3.41□□□□□ -1.86
PTP4A1-204ENST00000578299 EGR3Q06889 387 aa3.41□□□□□ -1.86
PTP4A1-204ENST00000578299 SV2CQ496J9 727 aa3.41□□□□□ -1.86
PTP4A1-204ENST00000578299 SLC23A3Q6PIS1 610 aa3.41□□□□□ -1.86
PTP4A1-204ENST00000578299 POMZP3Q6PJE2 187 aa3.41□□□□□ -1.86
PTP4A1-204ENST00000578299 ARHGEF39Q8N4T4 335 aa3.41□□□□□ -1.86
PTP4A1-204ENST00000578299 CRACR2BQ8N4Y2 399 aaPredicted RBP3.41□□□□□ -1.86
PTP4A1-204ENST00000578299 USHBP1Q8N6Y0 703 aa3.41□□□□□ -1.86
PTP4A1-204ENST00000578299 LINC00116Q8NCU8 138 aa3.41□□□□□ -1.86
PTP4A1-204ENST00000578299 ST13P5Q8NFI4 369 aaPredicted RBP3.41□□□□□ -1.86
PTP4A1-204ENST00000578299 BRF1Q92994 677 aa3.41□□□□□ -1.86
PTP4A1-204ENST00000578299 ZNF669Q96BR6 464 aaPredicted RBP3.41□□□□□ -1.86
PTP4A1-204ENST00000578299 SYTL4Q96C24 671 aaPredicted RBP3.41□□□□□ -1.86
PTP4A1-204ENST00000578299 CCDC120Q96HB5 630 aa3.41□□□□□ -1.86
PTP4A1-204ENST00000578299 OSBPL2Q9H1P3 480 aa3.41□□□□□ -1.86
PTP4A1-204ENST00000578299 NOL6Q9H6R4 1146 aaKnown RBP3.41□□□□□ -1.86
PTP4A1-204ENST00000578299 CARS2Q9HA77 564 aaKnown RBP3.41□□□□□ -1.86
PTP4A1-204ENST00000578299 APEX2Q9UBZ4 518 aa3.41□□□□□ -1.86
PTP4A1-204ENST00000578299 CGGBP1Q9UFW8 167 aaPredicted RBP3.41□□□□□ -1.86
PTP4A1-204ENST00000578299 IQCA1LA6NCM1 817 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 H0Y8X5 98 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 MEIS1O00470 390 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 NOP56O00567 594 aaKnown RBP3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 PDPK1O15530 556 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 ZNF205O95201 554 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 SYPP08247 313 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 VAV1P15498 845 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 CTSKP43235 329 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 NOP2P46087 812 aaKnown RBP3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 GP2P55259 537 aaKnown RBP3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 POU4F1Q01851 419 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 TEKQ02763 1124 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 GRB10Q13322 594 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 RASGRF1Q13972 1273 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 PPP2R5DQ14738 602 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 PLCL1Q15111 1095 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 NFE2L2Q16236 605 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 SLC10A6Q3KNW5 377 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 CRTC3Q6UUV7 619 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 NBPF11Q86T75 865 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 ZNF513Q8N8E2 541 aaPredicted RBP3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 BVESQ8NE79 360 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 ADCY4Q8NFM4 1077 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 PI4K2BQ8TCG2 481 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 PPP1R14AQ96A00 147 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 DEPDC7Q96QD5 511 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 FOXP3Q9BZS1 431 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 LNPKQ9C0E8 428 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 LRP2BPQ9P2M1 347 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 TCFL5Q9UL49 500 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 MINPP1Q9UNW1 487 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 AKT3Q9Y243 479 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 EMC9Q9Y3B6 208 aa3.4□□□□□ -1.87
PTP4A1-204ENST00000578299 CCDC85CA6NKD9 419 aa3.39□□□□□ -1.87
PTP4A1-204ENST00000578299 ITGAVP06756 1048 aa3.39□□□□□ -1.87
PTP4A1-204ENST00000578299 AMPD2Q01433 879 aa3.39□□□□□ -1.87
PTP4A1-204ENST00000578299 IFRD2Q12894 506 aaPredicted RBP3.39□□□□□ -1.87
PTP4A1-204ENST00000578299 DUSP4Q13115 394 aa3.39□□□□□ -1.87
PTP4A1-204ENST00000578299 RASA3Q14644 834 aa3.39□□□□□ -1.87
PTP4A1-204ENST00000578299 ZNF792Q3KQV3 632 aa3.39□□□□□ -1.87
PTP4A1-204ENST00000578299 CCDC144BQ3MJ40 725 aa3.39□□□□□ -1.87
PTP4A1-204ENST00000578299 ZNF227Q86WZ6 799 aa3.39□□□□□ -1.87
PTP4A1-204ENST00000578299 TRIM59Q8IWR1 403 aa3.39□□□□□ -1.87
PTP4A1-204ENST00000578299 Q8N3U1 123 aa3.39□□□□□ -1.87
PTP4A1-204ENST00000578299 LRRN4CLQ8ND94 238 aa3.39□□□□□ -1.87
PTP4A1-204ENST00000578299 SGSM3Q96HU1 749 aa3.39□□□□□ -1.87
PTP4A1-204ENST00000578299 ZDHHC15Q96MV8 337 aa3.39□□□□□ -1.87
PTP4A1-204ENST00000578299 ALPK1Q96QP1 1244 aa3.39□□□□□ -1.87
PTP4A1-204ENST00000578299 SRPK1Q96SB4 655 aaKnown RBP3.39□□□□□ -1.87
PTP4A1-204ENST00000578299 SLC12A9Q9BXP2 914 aa3.39□□□□□ -1.87
PTP4A1-204ENST00000578299 SNTG2Q9NY99 539 aa3.39□□□□□ -1.87
PTP4A1-204ENST00000578299 SLAMF8Q9P0V8 285 aa3.39□□□□□ -1.87
PTP4A1-204ENST00000578299 ZNF281Q9Y2X9 895 aa3.39□□□□□ -1.87
PTP4A1-204ENST00000578299 TMEM82A0PJX8 343 aa3.38□□□□□ -1.87
PTP4A1-204ENST00000578299 FKTNO75072 461 aa3.38□□□□□ -1.87
PTP4A1-204ENST00000578299 KCNH1O95259 989 aa3.38□□□□□ -1.87
PTP4A1-204ENST00000578299 CD3EP07766 207 aa3.38□□□□□ -1.87
PTP4A1-204ENST00000578299 RNASE1P07998 156 aaKnown RBP3.38□□□□□ -1.87
PTP4A1-204ENST00000578299 GSTM1P09488 218 aa3.38□□□□□ -1.87
PTP4A1-204ENST00000578299 RPL10P27635 214 aaKnown RBP3.38□□□□□ -1.87
PTP4A1-204ENST00000578299 BMS1Q14692 1282 aaKnown RBP3.38□□□□□ -1.87
PTP4A1-204ENST00000578299 MTERF2Q49AM1 385 aa3.38□□□□□ -1.87
PTP4A1-204ENST00000578299 GTF2IRD2BQ6EKJ0 949 aa3.38□□□□□ -1.87
PTP4A1-204ENST00000578299 DPH6Q7L8W6 267 aa3.38□□□□□ -1.87
PTP4A1-204ENST00000578299 WAPLQ7Z5K2 1190 aa3.38□□□□□ -1.87
PTP4A1-204ENST00000578299 GTF2IRD2Q86UP8 949 aa3.38□□□□□ -1.87
PTP4A1-204ENST00000578299 ABI1Q8IZP0 508 aa3.38□□□□□ -1.87
PTP4A1-204ENST00000578299 LRRC47Q8N1G4 583 aaKnown RBP3.38□□□□□ -1.87
PTP4A1-204ENST00000578299 MRFAP1L1Q96HT8 127 aa3.38□□□□□ -1.87
PTP4A1-204ENST00000578299 MRGPRX3Q96LB0 322 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms