RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-212ENST00000575116 PRRT2Q7Z6L0 340 aaPredicted RBP13.77□□□□□ -0.21
PRPF8-212ENST00000575116 NUP88Q99567 741 aaPredicted RBP13.77□□□□□ -0.21
PRPF8-212ENST00000575116 ALG1Q9BT22 464 aa13.77□□□□□ -0.21
PRPF8-212ENST00000575116 JMJD4Q9H9V9 463 aa13.77□□□□□ -0.21
PRPF8-212ENST00000575116 SH3GLB2Q9NR46 395 aa13.77□□□□□ -0.21
PRPF8-212ENST00000575116 PNMA6FA0A0J9YX94 578 aa13.76□□□□□ -0.21
PRPF8-212ENST00000575116 USP17L15C9J2P7 530 aa13.76□□□□□ -0.21
PRPF8-212ENST00000575116 USP17L13C9JLJ4 530 aa13.76□□□□□ -0.21
PRPF8-212ENST00000575116 USP17L11C9JVI0 530 aa13.76□□□□□ -0.21
PRPF8-212ENST00000575116 USP17L18D6R9N7 530 aa13.76□□□□□ -0.21
PRPF8-212ENST00000575116 USP17L22D6RA61 530 aa13.76□□□□□ -0.21
PRPF8-212ENST00000575116 USP17L17D6RBQ6 530 aa13.76□□□□□ -0.21
PRPF8-212ENST00000575116 USP17L19D6RCP7 530 aa13.76□□□□□ -0.21
PRPF8-212ENST00000575116 USP17L20D6RJB6 530 aa13.76□□□□□ -0.21
PRPF8-212ENST00000575116 ZBTB5O15062 677 aa13.76□□□□□ -0.21
PRPF8-212ENST00000575116 STX6O43752 255 aa13.76□□□□□ -0.21
PRPF8-212ENST00000575116 ZBTB48P10074 688 aaPredicted RBP13.76□□□□□ -0.21
PRPF8-212ENST00000575116 SLC16A2P36021 539 aa13.76□□□□□ -0.21
PRPF8-212ENST00000575116 HUNKP57058 714 aa13.76□□□□□ -0.21
PRPF8-212ENST00000575116 USP17L24Q0WX57 530 aa13.76□□□□□ -0.21
PRPF8-212ENST00000575116 TRAF1Q13077 416 aa13.76□□□□□ -0.21
PRPF8-212ENST00000575116 IKQ13123 557 aaPredicted RBP13.76□□□□□ -0.21
PRPF8-212ENST00000575116 SNAPC2Q13487 334 aa13.76□□□□□ -0.21
PRPF8-212ENST00000575116 PRPF38AQ8NAV1 312 aaKnown RBP13.76□□□□□ -0.21
PRPF8-212ENST00000575116 CNKSR2Q8WXI2 1034 aa13.76□□□□□ -0.21
PRPF8-212ENST00000575116 WNK4Q96J92 1243 aa13.76□□□□□ -0.21
PRPF8-212ENST00000575116 HHIPL1Q96JK4 782 aa13.76□□□□□ -0.21
PRPF8-212ENST00000575116 C8orf76Q96K31 380 aa13.76□□□□□ -0.21
PRPF8-212ENST00000575116 VAT1LQ9HCJ6 419 aa13.76□□□□□ -0.21
PRPF8-212ENST00000575116 SEC63Q9UGP8 760 aaKnown RBP13.76□□□□□ -0.21
PRPF8-212ENST00000575116 ISY1Q9ULR0 285 aaKnown RBP13.76□□□□□ -0.21
PRPF8-212ENST00000575116 TLL2Q9Y6L7 1015 aa13.76□□□□□ -0.21
PRPF8-212ENST00000575116 MYPNQ86TC9 1320 aa13.75□□□□□ -0.21
PRPF8-212ENST00000575116 WDR33Q9C0J8 1336 aaKnown RBP13.75□□□□□ -0.21
PRPF8-212ENST00000575116 MYH6P13533 1939 aa13.75□□□□□ -0.21
PRPF8-212ENST00000575116 PPFIA3O75145 1194 aa13.75□□□□□ -0.21
PRPF8-212ENST00000575116 HOXA7P31268 230 aaPredicted RBP13.75□□□□□ -0.21
PRPF8-212ENST00000575116 GTF2A2P52657 109 aa13.75□□□□□ -0.21
PRPF8-212ENST00000575116 TRIM29Q14134 588 aa13.75□□□□□ -0.21
PRPF8-212ENST00000575116 CATSPERGQ6ZRH7 1159 aa13.75□□□□□ -0.21
PRPF8-212ENST00000575116 SAPCD2Q86UD0 394 aa13.75□□□□□ -0.21
PRPF8-212ENST00000575116 FBXO18Q8NFZ0 1043 aa13.75□□□□□ -0.21
PRPF8-212ENST00000575116 PIGSQ96S52 555 aa13.75□□□□□ -0.21
PRPF8-212ENST00000575116 SLF1Q9BQI6 1058 aa13.75□□□□□ -0.21
PRPF8-212ENST00000575116 CPVLQ9H3G5 476 aa13.75□□□□□ -0.21
PRPF8-212ENST00000575116 RPAP3Q9H6T3 665 aaPredicted RBP13.75□□□□□ -0.21
PRPF8-212ENST00000575116 PRR12Q9ULL5 1215 aa13.75□□□□□ -0.21
PRPF8-212ENST00000575116 PTPRFP10586 1907 aa13.74□□□□□ -0.21
PRPF8-212ENST00000575116 TMEM88BA6NKF7 163 aa13.74□□□□□ -0.21
PRPF8-212ENST00000575116 H3BQV1 296 aa13.74□□□□□ -0.21
PRPF8-212ENST00000575116 DTNBO60941 627 aa13.74□□□□□ -0.21
PRPF8-212ENST00000575116 BRD1O95696 1058 aa13.74□□□□□ -0.21
PRPF8-212ENST00000575116 CETPP11597 493 aa13.74□□□□□ -0.21
PRPF8-212ENST00000575116 GJA5P36382 358 aa13.74□□□□□ -0.21
PRPF8-212ENST00000575116 PABPC4Q13310 644 aaKnown RBP eCLIP13.74□□□□□ -0.21
PRPF8-212ENST00000575116 COG2Q14746 738 aa13.74□□□□□ -0.21
PRPF8-212ENST00000575116 IFFO2Q5TF58 517 aa13.74□□□□□ -0.21
PRPF8-212ENST00000575116 SPRYD7Q5W111 196 aa13.74□□□□□ -0.21
PRPF8-212ENST00000575116 CCDC12Q8WUD4 166 aaPredicted RBP13.74□□□□□ -0.21
PRPF8-212ENST00000575116 TANGO6Q9C0B7 1094 aa13.74□□□□□ -0.21
PRPF8-212ENST00000575116 RANBP17Q9H2T7 1088 aaKnown RBP13.74□□□□□ -0.21
PRPF8-212ENST00000575116 BARHL2Q9NY43 387 aa13.74□□□□□ -0.21
PRPF8-212ENST00000575116 HOXC10Q9NYD6 342 aa13.74□□□□□ -0.21
PRPF8-212ENST00000575116 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.74□□□□□ -0.21
PRPF8-212ENST00000575116 PNMA2Q9UL42 364 aa13.74□□□□□ -0.21
PRPF8-212ENST00000575116 LOC285556D6RIA3 1793 aa13.73□□□□□ -0.21
PRPF8-212ENST00000575116 hCG_1642624A0A1W2PR95 340 aa13.73□□□□□ -0.21
PRPF8-212ENST00000575116 FLOT1O75955 427 aa13.73□□□□□ -0.21
PRPF8-212ENST00000575116 ZSCAN22P10073 491 aaPredicted RBP13.73□□□□□ -0.21
PRPF8-212ENST00000575116 KRT40Q6A162 431 aa13.73□□□□□ -0.21
PRPF8-212ENST00000575116 GALNT17Q6IS24 598 aa13.73□□□□□ -0.21
PRPF8-212ENST00000575116 RGMBQ6NW40 437 aa13.73□□□□□ -0.21
PRPF8-212ENST00000575116 MS4A4AQ96JQ5 239 aa13.73□□□□□ -0.21
PRPF8-212ENST00000575116 AIFM3Q96NN9 605 aa13.73□□□□□ -0.21
PRPF8-212ENST00000575116 PPP1R9AQ9ULJ8 1098 aa13.73□□□□□ -0.21
PRPF8-212ENST00000575116 ADAMTS5Q9UNA0 930 aa13.73□□□□□ -0.21
PRPF8-212ENST00000575116 AGTPBP1Q9UPW5 1226 aa13.73□□□□□ -0.21
PRPF8-212ENST00000575116 MTMR6Q9Y217 621 aa13.73□□□□□ -0.21
PRPF8-212ENST00000575116 SLC45A1Q9Y2W3 748 aa13.73□□□□□ -0.21
PRPF8-212ENST00000575116 ZBED4O75132 1171 aa13.72□□□□□ -0.21
PRPF8-212ENST00000575116 DSG3P32926 999 aa13.72□□□□□ -0.21
PRPF8-212ENST00000575116 ZNF157P51786 506 aaPredicted RBP13.72□□□□□ -0.21
PRPF8-212ENST00000575116 DGKZQ13574 1117 aa13.72□□□□□ -0.21
PRPF8-212ENST00000575116 MOGSQ13724 837 aa13.72□□□□□ -0.21
PRPF8-212ENST00000575116 CDC37Q16543 378 aaPredicted RBP13.72□□□□□ -0.21
PRPF8-212ENST00000575116 QRICH1Q2TAL8 776 aa13.72□□□□□ -0.21
PRPF8-212ENST00000575116 PPP1R18Q6NYC8 613 aa13.72□□□□□ -0.21
PRPF8-212ENST00000575116 GADL1Q6ZQY3 521 aa13.72□□□□□ -0.21
PRPF8-212ENST00000575116 HOMER1Q86YM7 354 aa13.72□□□□□ -0.21
PRPF8-212ENST00000575116 TEX2Q8IWB9 1127 aa13.72□□□□□ -0.21
PRPF8-212ENST00000575116 CCDC148Q8NFR7 591 aa13.72□□□□□ -0.21
PRPF8-212ENST00000575116 PIBF1Q8WXW3 757 aa13.72□□□□□ -0.21
PRPF8-212ENST00000575116 CCDC102AQ96A19 550 aa13.72□□□□□ -0.21
PRPF8-212ENST00000575116 KIFC2Q96AC6 838 aa13.72□□□□□ -0.21
PRPF8-212ENST00000575116 PHF20Q9BVI0 1012 aa13.72□□□□□ -0.21
PRPF8-212ENST00000575116 AMNQ9BXJ7 453 aa13.72□□□□□ -0.21
PRPF8-212ENST00000575116 ZSCAN16Q9H4T2 348 aaPredicted RBP13.72□□□□□ -0.21
PRPF8-212ENST00000575116 FBXO28Q9NVF7 368 aa13.72□□□□□ -0.21
PRPF8-212ENST00000575116 ZDHHC9Q9Y397 364 aa13.72□□□□□ -0.21
PRPF8-212ENST00000575116 ESYT2A0FGR8 921 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms