RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 PCP11498 1178 aaKnown RBP12.51□□□□□ -0.41
LITAF-216ENST00000574848 COL6A1P12109 1028 aa12.51□□□□□ -0.41
LITAF-216ENST00000574848 FCER1AP12319 257 aa12.51□□□□□ -0.41
LITAF-216ENST00000574848 SDSP20132 328 aa12.51□□□□□ -0.41
LITAF-216ENST00000574848 CTDSPL2Q05D32 466 aa12.51□□□□□ -0.41
LITAF-216ENST00000574848 PLS1Q14651 629 aa12.51□□□□□ -0.41
LITAF-216ENST00000574848 FAM47AQ5JRC9 791 aa12.51□□□□□ -0.41
LITAF-216ENST00000574848 DPP9Q86TI2 863 aa12.51□□□□□ -0.41
LITAF-216ENST00000574848 NCAPG2Q86XI2 1143 aa12.51□□□□□ -0.41
LITAF-216ENST00000574848 LRRC47Q8N1G4 583 aaKnown RBP12.51□□□□□ -0.41
LITAF-216ENST00000574848 PRPF38AQ8NAV1 312 aaKnown RBP12.51□□□□□ -0.41
LITAF-216ENST00000574848 TEX13BQ9BXU2 312 aa12.51□□□□□ -0.41
LITAF-216ENST00000574848 NBPF3Q9H094 633 aa12.51□□□□□ -0.41
LITAF-216ENST00000574848 SLC38A10Q9HBR0 1119 aa12.51□□□□□ -0.41
LITAF-216ENST00000574848 SLC5A4Q9NY91 659 aa12.51□□□□□ -0.41
LITAF-216ENST00000574848 FEM1BQ9UK73 627 aa12.51□□□□□ -0.41
LITAF-216ENST00000574848 DIS3Q9Y2L1 958 aaKnown RBP12.51□□□□□ -0.41
LITAF-216ENST00000574848 CEP290O15078 2479 aa12.51□□□□□ -0.41
LITAF-216ENST00000574848 TSPY2A6NKD2 308 aa12.5□□□□□ -0.41
LITAF-216ENST00000574848 PLA2G6O60733 806 aa12.5□□□□□ -0.41
LITAF-216ENST00000574848 FDX1P10109 184 aa12.5□□□□□ -0.41
LITAF-216ENST00000574848 CYP2C19P33261 490 aa12.5□□□□□ -0.41
LITAF-216ENST00000574848 STAT3P40763 770 aa12.5□□□□□ -0.41
LITAF-216ENST00000574848 NT5C2P49902 561 aa12.5□□□□□ -0.41
LITAF-216ENST00000574848 OAZ1P54368 228 aa12.5□□□□□ -0.41
LITAF-216ENST00000574848 MFAP1P55081 439 aaKnown RBP12.5□□□□□ -0.41
LITAF-216ENST00000574848 TRPV1Q8NER1 839 aa12.5□□□□□ -0.41
LITAF-216ENST00000574848 DPF3Q92784 378 aa12.5□□□□□ -0.41
LITAF-216ENST00000574848 RILPL2Q969X0 211 aa12.5□□□□□ -0.41
LITAF-216ENST00000574848 MAML3Q96JK9 1138 aa12.5□□□□□ -0.41
LITAF-216ENST00000574848 TBC1D32Q96NH3 1257 aa12.5□□□□□ -0.41
LITAF-216ENST00000574848 PRO3102Q9H379 93 aa12.5□□□□□ -0.41
LITAF-216ENST00000574848 C11orf49Q9H6J7 331 aa12.5□□□□□ -0.41
LITAF-216ENST00000574848 IL17RBQ9NRM6 502 aa12.5□□□□□ -0.41
LITAF-216ENST00000574848 DDX20Q9UHI6 824 aaKnown RBP12.5□□□□□ -0.41
LITAF-216ENST00000574848 NRBP1Q9UHY1 535 aa12.5□□□□□ -0.41
LITAF-216ENST00000574848 PFASO15067 1338 aa12.5□□□□□ -0.41
LITAF-216ENST00000574848 HIP1O00291 1037 aa12.49□□□□□ -0.41
LITAF-216ENST00000574848 RAD21O60216 631 aa12.49□□□□□ -0.41
LITAF-216ENST00000574848 BMP3P12645 472 aa12.49□□□□□ -0.41
LITAF-216ENST00000574848 ZNF792Q3KQV3 632 aa12.49□□□□□ -0.41
LITAF-216ENST00000574848 HABP4Q5JVS0 413 aaKnown RBP12.49□□□□□ -0.41
LITAF-216ENST00000574848 SLFN13Q68D06 897 aa12.49□□□□□ -0.41
LITAF-216ENST00000574848 STAG1Q8WVM7 1258 aa12.49□□□□□ -0.41
LITAF-216ENST00000574848 MMP19Q99542 508 aa12.49□□□□□ -0.41
LITAF-216ENST00000574848 TCP11L1Q9NUJ3 509 aa12.49□□□□□ -0.41
LITAF-216ENST00000574848 NR2E3Q9Y5X4 410 aa12.49□□□□□ -0.41
LITAF-216ENST00000574848 DNAJC25-GNG10A0A024R161 153 aa12.48□□□□□ -0.41
LITAF-216ENST00000574848 SEPT4O43236 478 aa12.48□□□□□ -0.41
LITAF-216ENST00000574848 STAT2P52630 851 aa12.48□□□□□ -0.41
LITAF-216ENST00000574848 KCTD2Q14681 263 aa12.48□□□□□ -0.41
LITAF-216ENST00000574848 SNRNP48Q6IEG0 339 aaKnown RBP12.48□□□□□ -0.41
LITAF-216ENST00000574848 SAMD1Q6SPF0 538 aaPredicted RBP12.48□□□□□ -0.41
LITAF-216ENST00000574848 FAM160B2Q86V87 743 aa12.48□□□□□ -0.41
LITAF-216ENST00000574848 MSL3Q8N5Y2 521 aaKnown RBP12.48□□□□□ -0.41
LITAF-216ENST00000574848 INCENPQ9NQS7 918 aa12.48□□□□□ -0.41
LITAF-216ENST00000574848 LRRC37A2A6NM11 1700 aa12.48□□□□□ -0.41
LITAF-216ENST00000574848 DNM1LO00429 736 aa12.47□□□□□ -0.41
LITAF-216ENST00000574848 EVI5O60447 810 aa12.47□□□□□ -0.41
LITAF-216ENST00000574848 RANBP6O60518 1105 aaKnown RBP12.47□□□□□ -0.41
LITAF-216ENST00000574848 NMT2O60551 498 aa12.47□□□□□ -0.41
LITAF-216ENST00000574848 ZBED4O75132 1171 aa12.47□□□□□ -0.41
LITAF-216ENST00000574848 GSPT1P15170 499 aaKnown RBP12.47□□□□□ -0.41
LITAF-216ENST00000574848 SLC1A4P43007 532 aa12.47□□□□□ -0.41
LITAF-216ENST00000574848 AKNAD1Q5T1N1 836 aa12.47□□□□□ -0.41
LITAF-216ENST00000574848 ZNF467Q7Z7K2 595 aaPredicted RBP12.47□□□□□ -0.41
LITAF-216ENST00000574848 TBC1D10CQ8IV04 446 aa12.47□□□□□ -0.41
LITAF-216ENST00000574848 KIFC2Q96AC6 838 aa12.47□□□□□ -0.41
LITAF-216ENST00000574848 DSCC1Q9BVC3 393 aa12.47□□□□□ -0.41
LITAF-216ENST00000574848 C22orf23Q9BZE7 217 aa12.47□□□□□ -0.41
LITAF-216ENST00000574848 DIAPH3Q9NSV4 1193 aa12.47□□□□□ -0.41
LITAF-216ENST00000574848 STX8Q9UNK0 236 aa12.47□□□□□ -0.41
LITAF-216ENST00000574848 COLQQ9Y215 455 aaPredicted RBP12.47□□□□□ -0.41
LITAF-216ENST00000574848 RIPK3Q9Y572 518 aa12.47□□□□□ -0.41
LITAF-216ENST00000574848 RANBP2P49792 3224 aaKnown RBP12.47□□□□□ -0.41
LITAF-216ENST00000574848 ZNF536O15090 1300 aa12.46□□□□□ -0.41
LITAF-216ENST00000574848 RAD50Q92878 1312 aa12.46□□□□□ -0.41
LITAF-216ENST00000574848 SYNGAP1Q96PV0 1343 aa12.46□□□□□ -0.41
LITAF-216ENST00000574848 TMEM232C9JQI7 657 aa12.46□□□□□ -0.41
LITAF-216ENST00000574848 SEC24BO95487 1268 aa12.46□□□□□ -0.41
LITAF-216ENST00000574848 PGK2P07205 417 aa12.46□□□□□ -0.41
LITAF-216ENST00000574848 MAMDC4Q6UXC1 1216 aa12.46□□□□□ -0.41
LITAF-216ENST00000574848 CHST13Q8NET6 341 aa12.46□□□□□ -0.41
LITAF-216ENST00000574848 CHURC1Q8WUH1 139 aa12.46□□□□□ -0.41
LITAF-216ENST00000574848 DCAF4Q8WV16 495 aa12.46□□□□□ -0.41
LITAF-216ENST00000574848 TINF2Q9BSI4 451 aa12.46□□□□□ -0.41
LITAF-216ENST00000574848 RNF41Q9H4P4 317 aaPredicted RBP12.46□□□□□ -0.41
LITAF-216ENST00000574848 FBXO40Q9UH90 709 aa12.46□□□□□ -0.41
LITAF-216ENST00000574848 LCTP09848 1927 aa12.45□□□□□ -0.42
LITAF-216ENST00000574848 NEDD4P46934 1319 aa12.45□□□□□ -0.42
LITAF-216ENST00000574848 A0A1W2PPC1 479 aa12.45□□□□□ -0.42
LITAF-216ENST00000574848 TOP1P11387 765 aaKnown RBP12.45□□□□□ -0.42
LITAF-216ENST00000574848 MCCP23508 829 aa12.45□□□□□ -0.42
LITAF-216ENST00000574848 RCSD1Q6JBY9 416 aa12.45□□□□□ -0.42
LITAF-216ENST00000574848 CWC27Q6UX04 472 aaKnown RBP12.45□□□□□ -0.42
LITAF-216ENST00000574848 BTNL9Q6UXG8 535 aa12.45□□□□□ -0.42
LITAF-216ENST00000574848 CHRDL2Q6WN34 429 aa12.45□□□□□ -0.42
LITAF-216ENST00000574848 MFSD6Q6ZSS7 791 aa12.45□□□□□ -0.42
LITAF-216ENST00000574848 RASGRP2Q7LDG7 609 aa12.45□□□□□ -0.42
LITAF-216ENST00000574848 FGD4Q96M96 766 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms