RNA–Protein interactions for RNA: ENST00000571725.1

RPA1-204, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-204ENST00000571725 CCDC86Q9H6F5 360 aaKnown RBP4.34□□□□□ -1.71
RPA1-204ENST00000571725 DISC1Q9NRI5 854 aa4.34□□□□□ -1.71
RPA1-204ENST00000571725 ACTR10Q9NZ32 417 aa4.34□□□□□ -1.71
RPA1-204ENST00000571725 GMIPQ9P107 970 aa4.34□□□□□ -1.71
RPA1-204ENST00000571725 ADAM30Q9UKF2 790 aa4.34□□□□□ -1.71
RPA1-204ENST00000571725 PRR36Q9H6K5 1346 aa4.34□□□□□ -1.71
RPA1-204ENST00000571725 TEX51A0A1B0GUA7 166 aa4.33□□□□□ -1.72
RPA1-204ENST00000571725 GFRA2O00451 464 aa4.33□□□□□ -1.72
RPA1-204ENST00000571725 SMAD7O15105 426 aaKnown RBP4.33□□□□□ -1.72
RPA1-204ENST00000571725 FANCGO15287 622 aa4.33□□□□□ -1.72
RPA1-204ENST00000571725 SMARCA5O60264 1052 aaPredicted RBP4.33□□□□□ -1.72
RPA1-204ENST00000571725 PEX10O60683 326 aa4.33□□□□□ -1.72
RPA1-204ENST00000571725 HTR3BO95264 441 aa4.33□□□□□ -1.72
RPA1-204ENST00000571725 PLCG1P19174 1290 aa4.33□□□□□ -1.72
RPA1-204ENST00000571725 PI3P19957 117 aa4.33□□□□□ -1.72
RPA1-204ENST00000571725 ETFBP38117 255 aa4.33□□□□□ -1.72
RPA1-204ENST00000571725 IFRD2Q12894 506 aaPredicted RBP4.33□□□□□ -1.72
RPA1-204ENST00000571725 PPP2R5EQ16537 467 aa4.33□□□□□ -1.72
RPA1-204ENST00000571725 ZC3H12AQ5D1E8 599 aaKnown RBP4.33□□□□□ -1.72
RPA1-204ENST00000571725 RASIP1Q5U651 963 aa4.33□□□□□ -1.72
RPA1-204ENST00000571725 INTS3Q68E01 1043 aaKnown RBP4.33□□□□□ -1.72
RPA1-204ENST00000571725 CCDC81Q6ZN84 652 aa4.33□□□□□ -1.72
RPA1-204ENST00000571725 IRF2BP1Q8IU81 584 aa4.33□□□□□ -1.72
RPA1-204ENST00000571725 ZNF507Q8TCN5 953 aa4.33□□□□□ -1.72
RPA1-204ENST00000571725 PLPPR2Q96GM1 343 aa4.33□□□□□ -1.72
RPA1-204ENST00000571725 SRPK1Q96SB4 655 aaKnown RBP4.33□□□□□ -1.72
RPA1-204ENST00000571725 SGPP1Q9BX95 441 aa4.33□□□□□ -1.72
RPA1-204ENST00000571725 PRDM10Q9NQV6 1147 aa4.33□□□□□ -1.72
RPA1-204ENST00000571725 PRDM5Q9NQX1 630 aaPredicted RBP4.33□□□□□ -1.72
RPA1-204ENST00000571725 IRAK3Q9Y616 596 aa4.33□□□□□ -1.72
RPA1-204ENST00000571725 MYOCOSA0A1B0GUC4 107 aa4.32□□□□□ -1.72
RPA1-204ENST00000571725 TLDC2A0PJX2 215 aa4.32□□□□□ -1.72
RPA1-204ENST00000571725 PRAMEF27A3QJZ7 478 aa4.32□□□□□ -1.72
RPA1-204ENST00000571725 H3BS24 57 aa4.32□□□□□ -1.72
RPA1-204ENST00000571725 K7ESM1 405 aa4.32□□□□□ -1.72
RPA1-204ENST00000571725 TNFRSF1AP19438 455 aa4.32□□□□□ -1.72
RPA1-204ENST00000571725 GUCY2CP25092 1073 aa4.32□□□□□ -1.72
RPA1-204ENST00000571725 CCNFP41002 786 aa4.32□□□□□ -1.72
RPA1-204ENST00000571725 CASP7P55210 303 aa4.32□□□□□ -1.72
RPA1-204ENST00000571725 ERVFC1P60507 584 aa4.32□□□□□ -1.72
RPA1-204ENST00000571725 CLCQ05315 142 aa4.32□□□□□ -1.72
RPA1-204ENST00000571725 PTPN11Q06124 597 aaPredicted RBP4.32□□□□□ -1.72
RPA1-204ENST00000571725 BMS1Q14692 1282 aaKnown RBP4.32□□□□□ -1.72
RPA1-204ENST00000571725 SSPNQ14714 243 aa4.32□□□□□ -1.72
RPA1-204ENST00000571725 BBS9Q3SYG4 887 aa4.32□□□□□ -1.72
RPA1-204ENST00000571725 TMEM201Q5SNT2 666 aa4.32□□□□□ -1.72
RPA1-204ENST00000571725 LRFN4Q6PJG9 635 aa4.32□□□□□ -1.72
RPA1-204ENST00000571725 TAB3Q8N5C8 712 aaPredicted RBP4.32□□□□□ -1.72
RPA1-204ENST00000571725 ISL2Q96A47 359 aa4.32□□□□□ -1.72
RPA1-204ENST00000571725 WDR89Q96FK6 387 aaPredicted RBP4.32□□□□□ -1.72
RPA1-204ENST00000571725 DHRS1Q96LJ7 313 aa4.32□□□□□ -1.72
RPA1-204ENST00000571725 TMX1Q9H3N1 280 aa4.32□□□□□ -1.72
RPA1-204ENST00000571725 CDK11AQ9UQ88 783 aaPredicted RBP4.32□□□□□ -1.72
RPA1-204ENST00000571725 MEIS3P2A8K0S8 358 aa4.31□□□□□ -1.72
RPA1-204ENST00000571725 DCDC2CA8MYV0 355 aa4.31□□□□□ -1.72
RPA1-204ENST00000571725 KLF4O43474 513 aa4.31□□□□□ -1.72
RPA1-204ENST00000571725 ZNF862O60290 1169 aa4.31□□□□□ -1.72
RPA1-204ENST00000571725 PGRP06401 933 aa4.31□□□□□ -1.72
RPA1-204ENST00000571725 NAT2P11245 290 aa4.31□□□□□ -1.72
RPA1-204ENST00000571725 RAG1P15918 1043 aa4.31□□□□□ -1.72
RPA1-204ENST00000571725 GRK4P32298 578 aa4.31□□□□□ -1.72
RPA1-204ENST00000571725 PDE6BP35913 854 aa4.31□□□□□ -1.72
RPA1-204ENST00000571725 NCAPHQ15003 741 aa4.31□□□□□ -1.72
RPA1-204ENST00000571725 SLC6A19Q695T7 634 aa4.31□□□□□ -1.72
RPA1-204ENST00000571725 HID1Q8IV36 788 aa4.31□□□□□ -1.72
RPA1-204ENST00000571725 FAM177A1Q8N128 213 aaPredicted RBP4.31□□□□□ -1.72
RPA1-204ENST00000571725 SYT8Q8NBV8 401 aa4.31□□□□□ -1.72
RPA1-204ENST00000571725 MRIQ9BWK5 157 aa4.31□□□□□ -1.72
RPA1-204ENST00000571725 WNT10AQ9GZT5 417 aa4.31□□□□□ -1.72
RPA1-204ENST00000571725 RNF32Q9H0A6 362 aa4.31□□□□□ -1.72
RPA1-204ENST00000571725 CCDC113Q9H0I3 377 aa4.31□□□□□ -1.72
RPA1-204ENST00000571725 SLITRK6Q9H5Y7 841 aa4.31□□□□□ -1.72
RPA1-204ENST00000571725 PHAXQ9H814 394 aaKnown RBP4.31□□□□□ -1.72
RPA1-204ENST00000571725 REV1Q9UBZ9 1251 aa4.31□□□□□ -1.72
RPA1-204ENST00000571725 TMEM59LQ9UK28 342 aa4.31□□□□□ -1.72
RPA1-204ENST00000571725 SLC22A31A6NKX4 558 aa4.3□□□□□ -1.72
RPA1-204ENST00000571725 AGRPO00253 132 aa4.3□□□□□ -1.72
RPA1-204ENST00000571725 GDF5P43026 501 aa4.3□□□□□ -1.72
RPA1-204ENST00000571725 SERINC3Q13530 473 aa4.3□□□□□ -1.72
RPA1-204ENST00000571725 INPP5AQ14642 412 aa4.3□□□□□ -1.72
RPA1-204ENST00000571725 DDR2Q16832 855 aa4.3□□□□□ -1.72
RPA1-204ENST00000571725 VMACQ2NL98 169 aa4.3□□□□□ -1.72
RPA1-204ENST00000571725 LARP1BQ659C4 914 aaKnown RBP4.3□□□□□ -1.72
RPA1-204ENST00000571725 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.3□□□□□ -1.72
RPA1-204ENST00000571725 FAM214BQ7L5A3 538 aa4.3□□□□□ -1.72
RPA1-204ENST00000571725 NLRC3Q7RTR2 1065 aa4.3□□□□□ -1.72
RPA1-204ENST00000571725 FRMD5Q7Z6J6 570 aa4.3□□□□□ -1.72
RPA1-204ENST00000571725 C12orf40Q86WS4 652 aa4.3□□□□□ -1.72
RPA1-204ENST00000571725 RNF214Q8ND24 703 aa4.3□□□□□ -1.72
RPA1-204ENST00000571725 SIGLEC10Q96LC7 697 aa4.3□□□□□ -1.72
RPA1-204ENST00000571725 DEPDC7Q96QD5 511 aa4.3□□□□□ -1.72
RPA1-204ENST00000571725 CWC22Q9HCG8 908 aaKnown RBP4.3□□□□□ -1.72
RPA1-204ENST00000571725 POLR3KQ9Y2Y1 108 aaPredicted RBP4.3□□□□□ -1.72
RPA1-204ENST00000571725 DNAJC25-GNG10A0A024R161 153 aa4.29□□□□□ -1.72
RPA1-204ENST00000571725 IQCA1LA6NCM1 817 aa4.29□□□□□ -1.72
RPA1-204ENST00000571725 CCDC85CA6NKD9 419 aa4.29□□□□□ -1.72
RPA1-204ENST00000571725 DDAH1O94760 285 aa4.29□□□□□ -1.72
RPA1-204ENST00000571725 HPXP02790 462 aa4.29□□□□□ -1.72
RPA1-204ENST00000571725 TRHRP34981 398 aaPredicted RBP4.29□□□□□ -1.72
RPA1-204ENST00000571725 CRB2Q5IJ48 1285 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms