RNA–Protein interactions for RNA: ENST00000570871.2

PCDHB19P-201, Transcript of protocadherin beta 19 pseudogene, humanhuman

BASIC

Gene PCDHB19P, Length 2,371 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB19P-201ENST00000570871 DYNLL1P63167 89 aaKnown RBP19.03■□□□□ 0.64
PCDHB19P-201ENST00000570871 UBXN1Q04323 297 aa19.03■□□□□ 0.64
PCDHB19P-201ENST00000570871 ZNF658Q5TYW1 1059 aaPredicted RBP19.03■□□□□ 0.64
PCDHB19P-201ENST00000570871 IQCA1Q86XH1 822 aa19.03■□□□□ 0.64
PCDHB19P-201ENST00000570871 SRBD1Q8N5C6 995 aaKnown RBP19.03■□□□□ 0.64
PCDHB19P-201ENST00000570871 GUCA1BQ9UMX6 200 aa19.03■□□□□ 0.64
PCDHB19P-201ENST00000570871 EPN1Q9Y6I3 576 aaPredicted RBP19.03■□□□□ 0.64
PCDHB19P-201ENST00000570871 NDUFA10O95299 355 aa19.02■□□□□ 0.64
PCDHB19P-201ENST00000570871 RPN1P04843 607 aaKnown RBP19.02■□□□□ 0.64
PCDHB19P-201ENST00000570871 CALM1P0DP23 149 aa19.02■□□□□ 0.64
PCDHB19P-201ENST00000570871 CALM2P0DP24 149 aa19.02■□□□□ 0.64
PCDHB19P-201ENST00000570871 CALM3P0DP25 149 aa19.02■□□□□ 0.64
PCDHB19P-201ENST00000570871 MYH14Q7Z406 1995 aaKnown RBP19.02■□□□□ 0.64
PCDHB19P-201ENST00000570871 VEGFAP15692 232 aaPredicted RBP19.01■□□□□ 0.63
PCDHB19P-201ENST00000570871 PRCPP42785 496 aa19.01■□□□□ 0.63
PCDHB19P-201ENST00000570871 SLC20A2Q08357 652 aa19.01■□□□□ 0.63
PCDHB19P-201ENST00000570871 ITPK1Q13572 414 aa19.01■□□□□ 0.63
PCDHB19P-201ENST00000570871 CCDC152Q4G0S7 254 aa19.01■□□□□ 0.63
PCDHB19P-201ENST00000570871 IRF2BP1Q8IU81 584 aa19.01■□□□□ 0.63
PCDHB19P-201ENST00000570871 SEPT12Q8IYM1 358 aa19.01■□□□□ 0.63
PCDHB19P-201ENST00000570871 GBP3Q9H0R5 595 aa19.01■□□□□ 0.63
PCDHB19P-201ENST00000570871 CWC15Q9P013 229 aaKnown RBP19.01■□□□□ 0.63
PCDHB19P-201ENST00000570871 LCMT1Q9UIC8 334 aa19.01■□□□□ 0.63
PCDHB19P-201ENST00000570871 TRPC5Q9UL62 973 aaPredicted RBP19.01■□□□□ 0.63
PCDHB19P-201ENST00000570871 TTC26A0AVF1 554 aa19.01■□□□□ 0.63
PCDHB19P-201ENST00000570871 TSPYL1Q9H0U9 437 aa19.01■□□□□ 0.63
PCDHB19P-201ENST00000570871 LRRIQ3A6PVS8 624 aaPredicted RBP19■□□□□ 0.63
PCDHB19P-201ENST00000570871 DDAH1O94760 285 aa19■□□□□ 0.63
PCDHB19P-201ENST00000570871 NLRP5P59047 1200 aa19■□□□□ 0.63
PCDHB19P-201ENST00000570871 CCDC102AQ96A19 550 aa19■□□□□ 0.63
PCDHB19P-201ENST00000570871 COL4A1P02462 1669 aa19■□□□□ 0.63
PCDHB19P-201ENST00000570871 LOC102724428A0A0B4J2F2 783 aa19■□□□□ 0.63
PCDHB19P-201ENST00000570871 TRIM49BA6NDI0 452 aa19■□□□□ 0.63
PCDHB19P-201ENST00000570871 NMT2O60551 498 aa19■□□□□ 0.63
PCDHB19P-201ENST00000570871 PARP1P09874 1014 aaKnown RBP19■□□□□ 0.63
PCDHB19P-201ENST00000570871 GYG1P46976 350 aa19■□□□□ 0.63
PCDHB19P-201ENST00000570871 SIK1P57059 783 aa19■□□□□ 0.63
PCDHB19P-201ENST00000570871 EVX2Q03828 476 aa19■□□□□ 0.63
PCDHB19P-201ENST00000570871 PYM1Q9BRP8 204 aaKnown RBP19■□□□□ 0.63
PCDHB19P-201ENST00000570871 RMND1Q9NWS8 449 aa19■□□□□ 0.63
PCDHB19P-201ENST00000570871 HDAC6Q9UBN7 1215 aa19■□□□□ 0.63
PCDHB19P-201ENST00000570871 COL1A1P02452 1464 aaPredicted RBP18.99■□□□□ 0.63
PCDHB19P-201ENST00000570871 WTIPA6NIX2 430 aaPredicted RBP18.99■□□□□ 0.63
PCDHB19P-201ENST00000570871 ENC1O14682 589 aa18.99■□□□□ 0.63
PCDHB19P-201ENST00000570871 TUBBP07437 444 aa18.99■□□□□ 0.63
PCDHB19P-201ENST00000570871 SCG2P13521 617 aa18.99■□□□□ 0.63
PCDHB19P-201ENST00000570871 ATP6V1AP38606 617 aa18.99■□□□□ 0.63
PCDHB19P-201ENST00000570871 TRAPPC10P48553 1259 aa18.99■□□□□ 0.63
PCDHB19P-201ENST00000570871 WDR93Q6P2C0 686 aa18.99■□□□□ 0.63
PCDHB19P-201ENST00000570871 SMIM5Q71RC9 77 aa18.99■□□□□ 0.63
PCDHB19P-201ENST00000570871 TRAPPC11Q7Z392 1133 aa18.99■□□□□ 0.63
PCDHB19P-201ENST00000570871 BRIP1Q9BX63 1249 aa18.99■□□□□ 0.63
PCDHB19P-201ENST00000570871 PHACTR2O75167 634 aa18.99■□□□□ 0.63
PCDHB19P-201ENST00000570871 FGRP09769 529 aa18.99■□□□□ 0.63
PCDHB19P-201ENST00000570871 CTR9Q6PD62 1173 aa18.99■□□□□ 0.63
PCDHB19P-201ENST00000570871 OR8K1Q8NGG5 319 aa18.99■□□□□ 0.63
PCDHB19P-201ENST00000570871 CTCFLQ8NI51 663 aaPredicted RBP18.99■□□□□ 0.63
PCDHB19P-201ENST00000570871 TFR2Q9UP52 801 aa18.99■□□□□ 0.63
PCDHB19P-201ENST00000570871 A0A1B0GUL6 1792 aa18.99■□□□□ 0.63
PCDHB19P-201ENST00000570871 ZNF804BA4D1E1 1349 aa18.98■□□□□ 0.63
PCDHB19P-201ENST00000570871 H7C1D1 291 aa18.98■□□□□ 0.63
PCDHB19P-201ENST00000570871 EIF5P55010 431 aaKnown RBP18.98■□□□□ 0.63
PCDHB19P-201ENST00000570871 LEKR1Q6ZMV7 388 aa18.98■□□□□ 0.63
PCDHB19P-201ENST00000570871 MB21D1Q8N884 522 aa18.98■□□□□ 0.63
PCDHB19P-201ENST00000570871 FAM71BQ8TC56 605 aa18.98■□□□□ 0.63
PCDHB19P-201ENST00000570871 BRWD3Q6RI45 1802 aa18.98■□□□□ 0.63
PCDHB19P-201ENST00000570871 PSMD14O00487 310 aa18.98■□□□□ 0.63
PCDHB19P-201ENST00000570871 PMS1P54277 932 aaKnown RBP18.98■□□□□ 0.63
PCDHB19P-201ENST00000570871 HERVK_113P62684 666 aa18.98■□□□□ 0.63
PCDHB19P-201ENST00000570871 HSP90B2PQ58FF3 399 aa18.98■□□□□ 0.63
PCDHB19P-201ENST00000570871 CCDC148Q8NFR7 591 aa18.98■□□□□ 0.63
PCDHB19P-201ENST00000570871 ZNF384Q8TF68 577 aa18.98■□□□□ 0.63
PCDHB19P-201ENST00000570871 DNAJC7Q99615 494 aa18.98■□□□□ 0.63
PCDHB19P-201ENST00000570871 RNF216Q9NWF9 866 aaPredicted RBP18.98■□□□□ 0.63
PCDHB19P-201ENST00000570871 LUC7L2Q9Y383 392 aaKnown RBP18.98■□□□□ 0.63
PCDHB19P-201ENST00000570871 USP17L12C9JPN9 530 aa18.97■□□□□ 0.63
PCDHB19P-201ENST00000570871 USP17L21D6R901 530 aa18.97■□□□□ 0.63
PCDHB19P-201ENST00000570871 MYO1CO00159 1063 aa18.97■□□□□ 0.63
PCDHB19P-201ENST00000570871 PES1O00541 588 aaKnown RBP18.97■□□□□ 0.63
PCDHB19P-201ENST00000570871 ONECUT3O60422 494 aaPredicted RBP18.97■□□□□ 0.63
PCDHB19P-201ENST00000570871 STAT6P42226 847 aa18.97■□□□□ 0.63
PCDHB19P-201ENST00000570871 WDR59Q6PJI9 974 aa18.97■□□□□ 0.63
PCDHB19P-201ENST00000570871 ADSSL1Q8N142 457 aa18.97■□□□□ 0.63
PCDHB19P-201ENST00000570871 C4orf32Q8N8J7 132 aa18.97■□□□□ 0.63
PCDHB19P-201ENST00000570871 HAUS4Q9H6D7 363 aa18.97■□□□□ 0.63
PCDHB19P-201ENST00000570871 TAF1P21675 1872 aa18.97■□□□□ 0.63
PCDHB19P-201ENST00000570871 LGALS16A8MUM7 142 aa18.97■□□□□ 0.63
PCDHB19P-201ENST00000570871 ATP1A1P05023 1023 aaKnown RBP18.97■□□□□ 0.63
PCDHB19P-201ENST00000570871 LONP1P36776 959 aaKnown RBP18.97■□□□□ 0.63
PCDHB19P-201ENST00000570871 USP14P54578 494 aa18.97■□□□□ 0.63
PCDHB19P-201ENST00000570871 PFKFB3Q16875 520 aaPredicted RBP18.97■□□□□ 0.63
PCDHB19P-201ENST00000570871 MMS19Q96T76 1030 aa18.97■□□□□ 0.63
PCDHB19P-201ENST00000570871 BTAF1O14981 1849 aa18.97■□□□□ 0.63
PCDHB19P-201ENST00000570871 SBF2Q86WG5 1849 aa18.96■□□□□ 0.63
PCDHB19P-201ENST00000570871 TRIM66O15016 1216 aa18.96■□□□□ 0.63
PCDHB19P-201ENST00000570871 SRGAP2O75044 1071 aa18.96■□□□□ 0.63
PCDHB19P-201ENST00000570871 FAM47AQ5JRC9 791 aa18.96■□□□□ 0.63
PCDHB19P-201ENST00000570871 ARL6IP4Q66PJ3 421 aaKnown RBP18.96■□□□□ 0.63
PCDHB19P-201ENST00000570871 INTS5Q6P9B9 1019 aaKnown RBP18.96■□□□□ 0.63
PCDHB19P-201ENST00000570871 ZNF507Q8TCN5 953 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms