RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 KCNH3Q9ULD8 1083 aa6.86□□□□□ -1.31
CYLD-216ENST00000569891 WDHD1O75717 1129 aaPredicted RBP6.86□□□□□ -1.31
CYLD-216ENST00000569891 APOBEC3HQ6NTF7 200 aaKnown RBP6.86□□□□□ -1.31
CYLD-216ENST00000569891 DTHD1Q6ZMT9 781 aa6.86□□□□□ -1.31
CYLD-216ENST00000569891 NBPF11Q86T75 865 aa6.86□□□□□ -1.31
CYLD-216ENST00000569891 FAM160B2Q86V87 743 aa6.86□□□□□ -1.31
CYLD-216ENST00000569891 SMARCE1Q969G3 411 aa6.86□□□□□ -1.31
CYLD-216ENST00000569891 CEP95Q96GE4 821 aa6.86□□□□□ -1.31
CYLD-216ENST00000569891 CSRNP1Q96S65 589 aa6.86□□□□□ -1.31
CYLD-216ENST00000569891 AS3MTQ9HBK9 375 aa6.86□□□□□ -1.31
CYLD-216ENST00000569891 RAD21O60216 631 aa6.86□□□□□ -1.31
CYLD-216ENST00000569891 NEMFO60524 1076 aa6.86□□□□□ -1.31
CYLD-216ENST00000569891 ZNF202O95125 648 aa6.86□□□□□ -1.31
CYLD-216ENST00000569891 ATP2B1P20020 1258 aa6.86□□□□□ -1.31
CYLD-216ENST00000569891 PTPREP23469 700 aa6.86□□□□□ -1.31
CYLD-216ENST00000569891 DEFB132Q7Z7B7 95 aa6.86□□□□□ -1.31
CYLD-216ENST00000569891 C7orf43Q8WVR3 580 aa6.86□□□□□ -1.31
CYLD-216ENST00000569891 CALML4Q96GE6 196 aa6.86□□□□□ -1.31
CYLD-216ENST00000569891 MTMR7Q9Y216 660 aa6.86□□□□□ -1.31
CYLD-216ENST00000569891 DICER1Q9UPY3 1922 aaKnown RBP6.86□□□□□ -1.31
CYLD-216ENST00000569891 ASNSP08243 561 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 UBA7P41226 1012 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 GABPAQ06546 454 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 OTUD7BQ6GQQ9 843 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 FAM173BQ6P4H8 233 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 APOBEC3FQ8IUX4 373 aaKnown RBP6.85□□□□□ -1.31
CYLD-216ENST00000569891 VEZTQ9HBM0 779 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 KCNJ14Q9UNX9 436 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 ATRNL1Q5VV63 1379 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 TBC1D12O60347 775 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 PLEKHA8P1O95397 391 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 LMOD1P29536 600 aaPredicted RBP6.85□□□□□ -1.31
CYLD-216ENST00000569891 PRPHP41219 470 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 RESP18Q5W5W9 173 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 SLFN13Q68D06 897 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 RBM43Q6ZSC3 357 aaKnown RBP6.85□□□□□ -1.31
CYLD-216ENST00000569891 DPF2Q92785 391 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 MKL1Q969V6 931 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 PPP1R9BQ96SB3 815 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 INCENPQ9NQS7 918 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 TCEAL9Q9UHQ7 104 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 CLIC4Q9Y696 253 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 SMCO2A6NFE2 343 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 SPDYE2BA6NHP3 402 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 KIF20AO95235 890 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 SPDYE6P0CI01 402 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 USP14P54578 494 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 AP3B2Q13367 1082 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 NEK8Q86SG6 692 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 SRBD1Q8N5C6 995 aaKnown RBP6.85□□□□□ -1.31
CYLD-216ENST00000569891 GMCL1P1Q8NEA9 526 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 BMP2KQ9NSY1 1161 aaPredicted RBP6.85□□□□□ -1.31
CYLD-216ENST00000569891 BCS1LQ9Y276 419 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 PPP2R3BQ9Y5P8 575 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 WTIPA6NIX2 430 aaPredicted RBP6.85□□□□□ -1.31
CYLD-216ENST00000569891 PFKFB1P16118 471 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 LIG1P18858 919 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 CAMK4Q16566 473 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 TPD52L1Q16890 204 aaPredicted RBP6.85□□□□□ -1.31
CYLD-216ENST00000569891 HOMER1Q86YM7 354 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 CERS5Q8N5B7 392 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 SAMD3Q8N6K7 520 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 MLKLQ8NB16 471 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 RNF214Q8ND24 703 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 SPON1Q9HCB6 807 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 KIAA1468Q9P260 1216 aa6.85□□□□□ -1.31
CYLD-216ENST00000569891 TPM1P09493 284 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 MARCKSP29966 332 aaPredicted RBP6.84□□□□□ -1.31
CYLD-216ENST00000569891 NLRP12P59046 1061 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 ZNF543Q08ER8 600 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 SLC4A8Q2Y0W8 1093 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 PIK3AP1Q6ZUJ8 805 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 FAM43AQ8N2R8 423 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 ERMNQ8TAM6 284 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 FEZ1Q99689 392 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 AMNQ9BXJ7 453 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 MAD2L2Q9UI95 211 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 FAM237AA0A1B0GTK4 181 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 NR1I2O75469 434 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 TCP10Q12799 353 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 SPDYE2Q495Y8 402 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 KCTD17Q8N5Z5 321 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 GMCL1Q96IK5 515 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 PGBD1Q96JS3 809 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 BPIFA3Q9BQP9 254 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 TRIM5Q9C035 493 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 ZMYND12Q9H0C1 365 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 RIOX1Q9H6W3 641 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 ZNF70Q9UC06 446 aaPredicted RBP6.84□□□□□ -1.31
CYLD-216ENST00000569891 BAZ2AQ9UIF9 1905 aaKnown RBP6.84□□□□□ -1.31
CYLD-216ENST00000569891 PSMD14O00487 310 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 ZBTB5O15062 677 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 PDHBP11177 359 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 NOVP48745 357 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 ANO6Q4KMQ2 910 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 FILIP1LQ4L180 1135 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 CKAP2LQ8IYA6 745 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 FMR1NBQ8N0W7 255 aaPredicted RBP6.84□□□□□ -1.31
CYLD-216ENST00000569891 MYH1P12882 1939 aa6.84□□□□□ -1.31
CYLD-216ENST00000569891 A0A1B0GVL5 298 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms