RNA–Protein interactions for RNA: ENST00000565377.1

RPUSD1-205, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-205ENST00000565377 AGXT2Q9BYV1 514 aa23.42■■□□□ 1.34
RPUSD1-205ENST00000565377 ALDH8A1Q9H2A2 487 aaPredicted RBP23.42■■□□□ 1.34
RPUSD1-205ENST00000565377 GNRH1P01148 92 aa23.41■■□□□ 1.34
RPUSD1-205ENST00000565377 ERVK-9P63128 1117 aa23.41■■□□□ 1.34
RPUSD1-205ENST00000565377 ERVK-24P63145 666 aa23.41■■□□□ 1.34
RPUSD1-205ENST00000565377 GRM4Q14833 912 aa23.41■■□□□ 1.34
RPUSD1-205ENST00000565377 NUP133Q8WUM0 1156 aa23.41■■□□□ 1.34
RPUSD1-205ENST00000565377 ATG4CQ96DT6 458 aa23.41■■□□□ 1.34
RPUSD1-205ENST00000565377 PAGR1Q9BTK6 254 aa23.41■■□□□ 1.34
RPUSD1-205ENST00000565377 GPCPD1Q9NPB8 672 aa23.41■■□□□ 1.34
RPUSD1-205ENST00000565377 PRDM10Q9NQV6 1147 aa23.41■■□□□ 1.34
RPUSD1-205ENST00000565377 FBXO28Q9NVF7 368 aa23.41■■□□□ 1.34
RPUSD1-205ENST00000565377 RBPJLQ9UBG7 517 aa23.41■■□□□ 1.34
RPUSD1-205ENST00000565377 FRMPD2Q68DX3 1309 aaPredicted RBP23.4■■□□□ 1.34
RPUSD1-205ENST00000565377 CCDC196A0A1B0GTZ2 297 aa23.4■■□□□ 1.34
RPUSD1-205ENST00000565377 ZBTB43O43298 467 aa23.4■■□□□ 1.34
RPUSD1-205ENST00000565377 SYDE2Q5VT97 1194 aa23.4■■□□□ 1.34
RPUSD1-205ENST00000565377 ZNF296Q8WUU4 475 aaPredicted RBP23.4■■□□□ 1.34
RPUSD1-205ENST00000565377 BRF1Q92994 677 aa23.4■■□□□ 1.34
RPUSD1-205ENST00000565377 TCEANC2Q96MN5 208 aa23.4■■□□□ 1.34
RPUSD1-205ENST00000565377 UPF3BQ9BZI7 483 aaKnown RBP23.4■■□□□ 1.34
RPUSD1-205ENST00000565377 R3HDMLQ9H3Y0 253 aa23.4■■□□□ 1.34
RPUSD1-205ENST00000565377 RBM28Q9NW13 759 aaKnown RBP23.4■■□□□ 1.34
RPUSD1-205ENST00000565377 TSKSQ9UJT2 592 aa23.4■■□□□ 1.34
RPUSD1-205ENST00000565377 PALM3A6NDB9 673 aaPredicted RBP23.39■■□□□ 1.33
RPUSD1-205ENST00000565377 KLRF2D3W0D1 207 aa23.39■■□□□ 1.33
RPUSD1-205ENST00000565377 ATP2A1O14983 1001 aa23.39■■□□□ 1.33
RPUSD1-205ENST00000565377 SLC25A27O95847 323 aa23.39■■□□□ 1.33
RPUSD1-205ENST00000565377 CPA1P15085 419 aa23.39■■□□□ 1.33
RPUSD1-205ENST00000565377 HOXD10P28358 340 aa23.39■■□□□ 1.33
RPUSD1-205ENST00000565377 SMARCA1P28370 1054 aa23.39■■□□□ 1.33
RPUSD1-205ENST00000565377 MAPK4P31152 587 aa23.39■■□□□ 1.33
RPUSD1-205ENST00000565377 LBX1P52954 281 aa23.39■■□□□ 1.33
RPUSD1-205ENST00000565377 LACTBP83111 547 aaPredicted RBP23.39■■□□□ 1.33
RPUSD1-205ENST00000565377 TRAF1Q13077 416 aa23.39■■□□□ 1.33
RPUSD1-205ENST00000565377 APOA5Q6Q788 366 aa23.39■■□□□ 1.33
RPUSD1-205ENST00000565377 SLC38A10Q9HBR0 1119 aa23.39■■□□□ 1.33
RPUSD1-205ENST00000565377 SENP2Q9HC62 589 aa23.39■■□□□ 1.33
RPUSD1-205ENST00000565377 CWC22Q9HCG8 908 aaKnown RBP23.39■■□□□ 1.33
RPUSD1-205ENST00000565377 PRR12Q9ULL5 1215 aa23.39■■□□□ 1.33
RPUSD1-205ENST00000565377 KLF18A0A0U1RQI7 1052 aa23.38■■□□□ 1.33
RPUSD1-205ENST00000565377 FCGRTP55899 365 aa23.38■■□□□ 1.33
RPUSD1-205ENST00000565377 SHCBP1Q8NEM2 672 aa23.38■■□□□ 1.33
RPUSD1-205ENST00000565377 TEX13BQ9BXU2 312 aa23.38■■□□□ 1.33
RPUSD1-205ENST00000565377 SPATC1LQ9H0A9 340 aa23.38■■□□□ 1.33
RPUSD1-205ENST00000565377 GPHNQ9NQX3 736 aaPredicted RBP23.38■■□□□ 1.33
RPUSD1-205ENST00000565377 MAD2L2Q9UI95 211 aa23.38■■□□□ 1.33
RPUSD1-205ENST00000565377 DHX16O60231 1041 aaKnown RBP23.37■■□□□ 1.33
RPUSD1-205ENST00000565377 EVCP57679 992 aa23.37■■□□□ 1.33
RPUSD1-205ENST00000565377 PLS1Q14651 629 aa23.37■■□□□ 1.33
RPUSD1-205ENST00000565377 RABEP1Q15276 862 aa23.37■■□□□ 1.33
RPUSD1-205ENST00000565377 FANCBQ8NB91 859 aa23.37■■□□□ 1.33
RPUSD1-205ENST00000565377 CHMP4CQ96CF2 233 aa23.37■■□□□ 1.33
RPUSD1-205ENST00000565377 TBC1D32Q96NH3 1257 aa23.37■■□□□ 1.33
RPUSD1-205ENST00000565377 NAP1L2Q9ULW6 460 aaPredicted RBP23.37■■□□□ 1.33
RPUSD1-205ENST00000565377 GOLGA8HP0CJ92 632 aa23.36■■□□□ 1.33
RPUSD1-205ENST00000565377 STAT3P40763 770 aa23.36■■□□□ 1.33
RPUSD1-205ENST00000565377 NEK4P51957 841 aa23.36■■□□□ 1.33
RPUSD1-205ENST00000565377 COL9A3Q14050 684 aaPredicted RBP23.36■■□□□ 1.33
RPUSD1-205ENST00000565377 TTBK2Q6IQ55 1244 aa23.36■■□□□ 1.33
RPUSD1-205ENST00000565377 MICU3Q86XE3 530 aa23.36■■□□□ 1.33
RPUSD1-205ENST00000565377 COA7Q96BR5 231 aa23.36■■□□□ 1.33
RPUSD1-205ENST00000565377 RANBP17Q9H2T7 1088 aaKnown RBP23.36■■□□□ 1.33
RPUSD1-205ENST00000565377 MROH8Q9H579 483 aa23.36■■□□□ 1.33
RPUSD1-205ENST00000565377 TXNRD2Q9NNW7 524 aa23.36■■□□□ 1.33
RPUSD1-205ENST00000565377 BTBD7Q9P203 1132 aa23.36■■□□□ 1.33
RPUSD1-205ENST00000565377 GOLGA8BA8MQT2 603 aa23.35■■□□□ 1.33
RPUSD1-205ENST00000565377 CNMDO75829 334 aa23.35■■□□□ 1.33
RPUSD1-205ENST00000565377 FMNL1O95466 1100 aaPredicted RBP23.35■■□□□ 1.33
RPUSD1-205ENST00000565377 SLC16A2P36021 539 aa23.35■■□□□ 1.33
RPUSD1-205ENST00000565377 METAP2P50579 478 aaKnown RBP eCLIP23.35■■□□□ 1.33
RPUSD1-205ENST00000565377 PRMT2P55345 433 aa23.35■■□□□ 1.33
RPUSD1-205ENST00000565377 TMEM132BQ14DG7 1078 aa23.35■■□□□ 1.33
RPUSD1-205ENST00000565377 RTN1Q16799 776 aa23.35■■□□□ 1.33
RPUSD1-205ENST00000565377 TKFCQ3LXA3 575 aa23.35■■□□□ 1.33
RPUSD1-205ENST00000565377 RIOX2Q8IUF8 465 aa23.35■■□□□ 1.33
RPUSD1-205ENST00000565377 ZNF274Q96GC6 653 aaPredicted RBP23.35■■□□□ 1.33
RPUSD1-205ENST00000565377 FBXO40Q9UH90 709 aa23.35■■□□□ 1.33
RPUSD1-205ENST00000565377 GOLGA8AA7E2F4 631 aa23.34■■□□□ 1.33
RPUSD1-205ENST00000565377 PSMC4P43686 418 aa23.34■■□□□ 1.33
RPUSD1-205ENST00000565377 APOBRQ0VD83 1088 aa23.34■■□□□ 1.33
RPUSD1-205ENST00000565377 RASGRP2Q7LDG7 609 aa23.34■■□□□ 1.33
RPUSD1-205ENST00000565377 REPS2Q8NFH8 660 aa23.34■■□□□ 1.33
RPUSD1-205ENST00000565377 MYL10Q9BUA6 226 aa23.34■■□□□ 1.33
RPUSD1-205ENST00000565377 ZNF214Q9UL59 606 aaPredicted RBP23.34■■□□□ 1.33
RPUSD1-205ENST00000565377 BRPF3Q9ULD4 1205 aa23.34■■□□□ 1.33
RPUSD1-205ENST00000565377 IVNS1ABPQ9Y6Y0 642 aa23.34■■□□□ 1.33
RPUSD1-205ENST00000565377 TNPO2O14787 897 aaKnown RBP23.33■■□□□ 1.33
RPUSD1-205ENST00000565377 STRNO43815 780 aa23.33■■□□□ 1.33
RPUSD1-205ENST00000565377 ST18O60284 1047 aa23.33■■□□□ 1.33
RPUSD1-205ENST00000565377 ICAM1P05362 532 aa23.33■■□□□ 1.33
RPUSD1-205ENST00000565377 TOB2Q14106 344 aaPredicted RBP23.33■■□□□ 1.33
RPUSD1-205ENST00000565377 SNRNP48Q6IEG0 339 aaKnown RBP23.33■■□□□ 1.33
RPUSD1-205ENST00000565377 ADGRF4Q8IZF3 695 aa23.33■■□□□ 1.33
RPUSD1-205ENST00000565377 CPXCR1Q8N123 301 aa23.33■■□□□ 1.33
RPUSD1-205ENST00000565377 STAG2Q8N3U4 1231 aa23.33■■□□□ 1.33
RPUSD1-205ENST00000565377 CD99L2Q8TCZ2 262 aa23.33■■□□□ 1.33
RPUSD1-205ENST00000565377 SPZ1Q9BXG8 430 aa23.33■■□□□ 1.33
RPUSD1-205ENST00000565377 MOV10L1Q9BXT6 1211 aaKnown RBP23.33■■□□□ 1.33
RPUSD1-205ENST00000565377 UBA5Q9GZZ9 404 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms