RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 SNX17Q15036 470 aa5.75□□□□□ -1.49
HMGB1P33-201ENST00000563485 ZYXQ15942 572 aaKnown RBP5.75□□□□□ -1.49
HMGB1P33-201ENST00000563485 CRTC3Q6UUV7 619 aa5.75□□□□□ -1.49
HMGB1P33-201ENST00000563485 SPOCD1Q6ZMY3 1216 aa5.75□□□□□ -1.49
HMGB1P33-201ENST00000563485 CCDC81Q6ZN84 652 aa5.75□□□□□ -1.49
HMGB1P33-201ENST00000563485 ATG14Q6ZNE5 492 aa5.75□□□□□ -1.49
HMGB1P33-201ENST00000563485 CEP128Q6ZU80 1094 aa5.75□□□□□ -1.49
HMGB1P33-201ENST00000563485 NLRX1Q86UT6 975 aa5.75□□□□□ -1.49
HMGB1P33-201ENST00000563485 METTL16Q86W50 562 aaKnown RBP5.75□□□□□ -1.49
HMGB1P33-201ENST00000563485 ANKLE2Q86XL3 938 aa5.75□□□□□ -1.49
HMGB1P33-201ENST00000563485 C1QL4Q86Z23 238 aa5.75□□□□□ -1.49
HMGB1P33-201ENST00000563485 CCDC144CPQ8IYA2 1237 aa5.75□□□□□ -1.49
HMGB1P33-201ENST00000563485 TAB3Q8N5C8 712 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P33-201ENST00000563485 SLC26A8Q96RN1 970 aa5.75□□□□□ -1.49
HMGB1P33-201ENST00000563485 TM9SF2Q99805 663 aa5.75□□□□□ -1.49
HMGB1P33-201ENST00000563485 MCOLN1Q9GZU1 580 aa5.75□□□□□ -1.49
HMGB1P33-201ENST00000563485 MYOCOSA0A1B0GUC4 107 aa5.74□□□□□ -1.49
HMGB1P33-201ENST00000563485 NRDCO43847 1150 aa5.74□□□□□ -1.49
HMGB1P33-201ENST00000563485 MED14OSP0DP75 135 aa5.74□□□□□ -1.49
HMGB1P33-201ENST00000563485 TRIM26Q12899 539 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P33-201ENST00000563485 SLC14A2Q15849 920 aa5.74□□□□□ -1.49
HMGB1P33-201ENST00000563485 LSRQ86X29 649 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P33-201ENST00000563485 LRRC56Q8IYG6 542 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P33-201ENST00000563485 C7orf61Q8IZ16 206 aa5.74□□□□□ -1.49
HMGB1P33-201ENST00000563485 ZNF654Q8IZM8 581 aa5.74□□□□□ -1.49
HMGB1P33-201ENST00000563485 RBBP8NLQ8NC74 664 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P33-201ENST00000563485 KCNN1Q92952 543 aa5.74□□□□□ -1.49
HMGB1P33-201ENST00000563485 FCRL2Q96LA5 508 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P33-201ENST00000563485 DHRS1Q96LJ7 313 aa5.74□□□□□ -1.49
HMGB1P33-201ENST00000563485 TOX2Q96NM4 488 aa5.74□□□□□ -1.49
HMGB1P33-201ENST00000563485 CD320Q9NPF0 282 aa5.74□□□□□ -1.49
HMGB1P33-201ENST00000563485 GINM1Q9NU53 330 aa5.74□□□□□ -1.49
HMGB1P33-201ENST00000563485 FAM86C1Q9NVL1 165 aa5.74□□□□□ -1.49
HMGB1P33-201ENST00000563485 TCAF2A6NFQ2 919 aa5.73□□□□□ -1.49
HMGB1P33-201ENST00000563485 NPIPB6E9PJ23 425 aa5.73□□□□□ -1.49
HMGB1P33-201ENST00000563485 ZNF205O95201 554 aa5.73□□□□□ -1.49
HMGB1P33-201ENST00000563485 GLDCP23378 1020 aa5.73□□□□□ -1.49
HMGB1P33-201ENST00000563485 GUCY2CP25092 1073 aa5.73□□□□□ -1.49
HMGB1P33-201ENST00000563485 BMP8BP34820 402 aa5.73□□□□□ -1.49
HMGB1P33-201ENST00000563485 AXDND1Q5T1B0 1012 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P33-201ENST00000563485 DCAF15Q66K64 600 aa5.73□□□□□ -1.49
HMGB1P33-201ENST00000563485 UNC5AQ6ZN44 842 aa5.73□□□□□ -1.49
HMGB1P33-201ENST00000563485 MRRFQ96E11 262 aaKnown RBP5.73□□□□□ -1.49
HMGB1P33-201ENST00000563485 PLCD4Q9BRC7 762 aa5.73□□□□□ -1.49
HMGB1P33-201ENST00000563485 DSCC1Q9BVC3 393 aa5.73□□□□□ -1.49
HMGB1P33-201ENST00000563485 ZNF552Q9H707 407 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P33-201ENST00000563485 ERVK13-1Q9NX77 482 aa5.73□□□□□ -1.49
HMGB1P33-201ENST00000563485 PRR13Q9NZ81 148 aa5.73□□□□□ -1.49
HMGB1P33-201ENST00000563485 GPR55Q9Y2T6 319 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P33-201ENST00000563485 FADS2P1A8MWK0 482 aa5.72□□□□□ -1.49
HMGB1P33-201ENST00000563485 TP53P04637 393 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P33-201ENST00000563485 VAV1P15498 845 aa5.72□□□□□ -1.49
HMGB1P33-201ENST00000563485 CEBPAP49715 358 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P33-201ENST00000563485 HDLBPQ00341 1268 aaKnown RBP5.72□□□□□ -1.49
HMGB1P33-201ENST00000563485 KIR3DS1Q14943 382 aa5.72□□□□□ -1.49
HMGB1P33-201ENST00000563485 KCNA10Q16322 511 aa5.72□□□□□ -1.49
HMGB1P33-201ENST00000563485 ADGRF1Q5T601 910 aa5.72□□□□□ -1.49
HMGB1P33-201ENST00000563485 C9orf131Q5VYM1 1079 aa5.72□□□□□ -1.49
HMGB1P33-201ENST00000563485 CDADC1Q9BWV3 514 aa5.72□□□□□ -1.49
HMGB1P33-201ENST00000563485 AP5S1Q9NUS5 200 aa5.72□□□□□ -1.49
HMGB1P33-201ENST00000563485 KIAA1522Q9P206 1035 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P33-201ENST00000563485 SMG5Q9UPR3 1016 aaKnown RBP5.72□□□□□ -1.49
HMGB1P33-201ENST00000563485 EFR3BQ9Y2G0 817 aa5.72□□□□□ -1.49
HMGB1P33-201ENST00000563485 H0Y8X5 98 aa5.71□□□□□ -1.5
HMGB1P33-201ENST00000563485 PEX10O60683 326 aa5.71□□□□□ -1.5
HMGB1P33-201ENST00000563485 GSNP06396 782 aa5.71□□□□□ -1.5
HMGB1P33-201ENST00000563485 SDHBP21912 280 aa5.71□□□□□ -1.5
HMGB1P33-201ENST00000563485 RTP1P59025 263 aa5.71□□□□□ -1.5
HMGB1P33-201ENST00000563485 HSF5Q4G112 596 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P33-201ENST00000563485 LCNL1Q6ZST4 164 aa5.71□□□□□ -1.5
HMGB1P33-201ENST00000563485 NT5DC4Q86YG4 428 aa5.71□□□□□ -1.5
HMGB1P33-201ENST00000563485 ZSCAN18Q8TBC5 510 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P33-201ENST00000563485 SMARCC1Q92922 1105 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P33-201ENST00000563485 GP6Q9HCN6 339 aa5.71□□□□□ -1.5
HMGB1P33-201ENST00000563485 TNFRSF10DQ9UBN6 386 aa5.71□□□□□ -1.5
HMGB1P33-201ENST00000563485 LTBP3Q9NS15 1303 aa5.71□□□□□ -1.5
HMGB1P33-201ENST00000563485 OR14I1A6ND48 311 aa5.7□□□□□ -1.5
HMGB1P33-201ENST00000563485 UNCXA6NJT0 531 aa5.7□□□□□ -1.5
HMGB1P33-201ENST00000563485 SEMA7AO75326 666 aa5.7□□□□□ -1.5
HMGB1P33-201ENST00000563485 SOX9P48436 509 aa5.7□□□□□ -1.5
HMGB1P33-201ENST00000563485 ZNF445P59923 1031 aa5.7□□□□□ -1.5
HMGB1P33-201ENST00000563485 COL9A2Q14055 689 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P33-201ENST00000563485 KRTAP19-4Q3LI73 84 aa5.7□□□□□ -1.5
HMGB1P33-201ENST00000563485 FBLN7Q53RD9 439 aa5.7□□□□□ -1.5
HMGB1P33-201ENST00000563485 RTP2Q5QGT7 225 aa5.7□□□□□ -1.5
HMGB1P33-201ENST00000563485 BRF1Q92994 677 aa5.7□□□□□ -1.5
HMGB1P33-201ENST00000563485 GPRASP2Q96D09 838 aa5.7□□□□□ -1.5
HMGB1P33-201ENST00000563485 SGPP1Q9BX95 441 aa5.7□□□□□ -1.5
HMGB1P33-201ENST00000563485 CRTAC1Q9NQ79 661 aa5.7□□□□□ -1.5
HMGB1P33-201ENST00000563485 ZNF214Q9UL59 606 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P33-201ENST00000563485 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P33-201ENST00000563485 ZNF451Q9Y4E5 1061 aa5.7□□□□□ -1.5
HMGB1P33-201ENST00000563485 TAF6LQ9Y6J9 622 aa5.7□□□□□ -1.5
HMGB1P33-201ENST00000563485 TEX51A0A1B0GUA7 166 aa5.69□□□□□ -1.5
HMGB1P33-201ENST00000563485 GSTM1P09488 218 aa5.69□□□□□ -1.5
HMGB1P33-201ENST00000563485 ZSCAN22P10073 491 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P33-201ENST00000563485 CD247P20963 164 aa5.69□□□□□ -1.5
HMGB1P33-201ENST00000563485 ENDOUP21128 410 aaKnown RBP5.69□□□□□ -1.5
HMGB1P33-201ENST00000563485 LINC00310P59036 64 aa5.69□□□□□ -1.5
HMGB1P33-201ENST00000563485 DLG4P78352 724 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms