RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 TCFL5Q9UL49 500 aa3.98□□□□□ -1.77
CHD9-204ENST00000561869 ZNF214Q9UL59 606 aaPredicted RBP3.98□□□□□ -1.77
CHD9-204ENST00000561869 PCDHB12Q9Y5F1 795 aa3.98□□□□□ -1.77
CHD9-204ENST00000561869 A0A1W2PQH9 124 aa3.97□□□□□ -1.77
CHD9-204ENST00000561869 FITM1A5D6W6 292 aa3.97□□□□□ -1.77
CHD9-204ENST00000561869 PSPNO60542 156 aa3.97□□□□□ -1.77
CHD9-204ENST00000561869 ZNF205O95201 554 aa3.97□□□□□ -1.77
CHD9-204ENST00000561869 SYPP08247 313 aa3.97□□□□□ -1.77
CHD9-204ENST00000561869 NASPP49321 788 aaPredicted RBP3.97□□□□□ -1.77
CHD9-204ENST00000561869 EIF6P56537 245 aaKnown RBP3.97□□□□□ -1.77
CHD9-204ENST00000561869 PCBP3P57721 371 aaKnown RBP3.97□□□□□ -1.77
CHD9-204ENST00000561869 DCAF15Q66K64 600 aa3.97□□□□□ -1.77
CHD9-204ENST00000561869 CCDC144CPQ8IYA2 1237 aa3.97□□□□□ -1.77
CHD9-204ENST00000561869 LILRA2Q8N149 483 aa3.97□□□□□ -1.77
CHD9-204ENST00000561869 OXR1Q8N573 874 aa3.97□□□□□ -1.77
CHD9-204ENST00000561869 ANKS4BQ8N8V4 417 aa3.97□□□□□ -1.77
CHD9-204ENST00000561869 C19orf47Q8N9M1 422 aaKnown RBP3.97□□□□□ -1.77
CHD9-204ENST00000561869 SEC16BQ96JE7 1060 aa3.97□□□□□ -1.77
CHD9-204ENST00000561869 SRRTQ9BXP5 876 aaKnown RBP3.97□□□□□ -1.77
CHD9-204ENST00000561869 KCNK12Q9HB15 430 aa3.97□□□□□ -1.77
CHD9-204ENST00000561869 GP6Q9HCN6 339 aa3.97□□□□□ -1.77
CHD9-204ENST00000561869 FBXL21Q9UKT6 434 aa3.97□□□□□ -1.77
CHD9-204ENST00000561869 MEIS1O00470 390 aa3.96□□□□□ -1.78
CHD9-204ENST00000561869 CBFA2T2O43439 604 aa3.96□□□□□ -1.78
CHD9-204ENST00000561869 TSPAN15O95858 294 aa3.96□□□□□ -1.78
CHD9-204ENST00000561869 TP53P04637 393 aaPredicted RBP3.96□□□□□ -1.78
CHD9-204ENST00000561869 VAV1P15498 845 aa3.96□□□□□ -1.78
CHD9-204ENST00000561869 RPL10P27635 214 aaKnown RBP3.96□□□□□ -1.78
CHD9-204ENST00000561869 BMP8BP34820 402 aa3.96□□□□□ -1.78
CHD9-204ENST00000561869 RAP1GAPP47736 663 aa3.96□□□□□ -1.78
CHD9-204ENST00000561869 ZNF445P59923 1031 aa3.96□□□□□ -1.78
CHD9-204ENST00000561869 CHRNEQ04844 493 aa3.96□□□□□ -1.78
CHD9-204ENST00000561869 DUSP4Q13115 394 aa3.96□□□□□ -1.78
CHD9-204ENST00000561869 RTP2Q5QGT7 225 aa3.96□□□□□ -1.78
CHD9-204ENST00000561869 CRTC3Q6UUV7 619 aa3.96□□□□□ -1.78
CHD9-204ENST00000561869 MPZL3Q6UWV2 235 aa3.96□□□□□ -1.78
CHD9-204ENST00000561869 WAPLQ7Z5K2 1190 aa3.96□□□□□ -1.78
CHD9-204ENST00000561869 SPPL2CQ8IUH8 684 aa3.96□□□□□ -1.78
CHD9-204ENST00000561869 FAM169BQ8N8A8 192 aa3.96□□□□□ -1.78
CHD9-204ENST00000561869 TMEM52Q8NDY8 209 aa3.96□□□□□ -1.78
CHD9-204ENST00000561869 BHLHE22Q8NFJ8 381 aaPredicted RBP3.96□□□□□ -1.78
CHD9-204ENST00000561869 OR6P1Q8NGX9 317 aa3.96□□□□□ -1.78
CHD9-204ENST00000561869 KLHL6Q8WZ60 621 aa3.96□□□□□ -1.78
CHD9-204ENST00000561869 SMARCC1Q92922 1105 aaPredicted RBP3.96□□□□□ -1.78
CHD9-204ENST00000561869 MAP6Q96JE9 813 aa3.96□□□□□ -1.78
CHD9-204ENST00000561869 HHIPL1Q96JK4 782 aa3.96□□□□□ -1.78
CHD9-204ENST00000561869 CRBNQ96SW2 442 aa3.96□□□□□ -1.78
CHD9-204ENST00000561869 YBX2Q9Y2T7 364 aaKnown RBP3.96□□□□□ -1.78
CHD9-204ENST00000561869 ZNF451Q9Y4E5 1061 aa3.96□□□□□ -1.78
CHD9-204ENST00000561869 FADS2P1A8MWK0 482 aa3.95□□□□□ -1.78
CHD9-204ENST00000561869 NRDCO43847 1150 aa3.95□□□□□ -1.78
CHD9-204ENST00000561869 FKTNO75072 461 aa3.95□□□□□ -1.78
CHD9-204ENST00000561869 USP2O75604 605 aaPredicted RBP3.95□□□□□ -1.78
CHD9-204ENST00000561869 ATF4P18848 351 aaPredicted RBP3.95□□□□□ -1.78
CHD9-204ENST00000561869 CD247P20963 164 aa3.95□□□□□ -1.78
CHD9-204ENST00000561869 KIR2DL1P43626 348 aaPredicted RBP3.95□□□□□ -1.78
CHD9-204ENST00000561869 KIR2DL2P43627 348 aaPredicted RBP3.95□□□□□ -1.78
CHD9-204ENST00000561869 GALK1P51570 392 aa3.95□□□□□ -1.78
CHD9-204ENST00000561869 CASP7P55210 303 aa3.95□□□□□ -1.78
CHD9-204ENST00000561869 SNX17Q15036 470 aa3.95□□□□□ -1.78
CHD9-204ENST00000561869 SYDE1Q6ZW31 735 aaPredicted RBP3.95□□□□□ -1.78
CHD9-204ENST00000561869 NLRX1Q86UT6 975 aa3.95□□□□□ -1.78
CHD9-204ENST00000561869 LRRC56Q8IYG6 542 aaPredicted RBP3.95□□□□□ -1.78
CHD9-204ENST00000561869 DIRC2Q96SL1 478 aa3.95□□□□□ -1.78
CHD9-204ENST00000561869 SLC12A9Q9BXP2 914 aa3.95□□□□□ -1.78
CHD9-204ENST00000561869 NSUN3Q9H649 340 aaKnown RBP3.95□□□□□ -1.78
CHD9-204ENST00000561869 IGSF5Q9NSI5 407 aa3.95□□□□□ -1.78
CHD9-204ENST00000561869 FAM86C1Q9NVL1 165 aa3.95□□□□□ -1.78
CHD9-204ENST00000561869 ERVK13-1Q9NX77 482 aa3.95□□□□□ -1.78
CHD9-204ENST00000561869 PCDHB10Q9UN67 800 aa3.95□□□□□ -1.78
CHD9-204ENST00000561869 INPP5FQ9Y2H2 1132 aa3.95□□□□□ -1.78
CHD9-204ENST00000561869 A0A087WZG4 1122 aa3.94□□□□□ -1.78
CHD9-204ENST00000561869 SSU72P8A0A1W2PR75 194 aa3.94□□□□□ -1.78
CHD9-204ENST00000561869 H0Y8X5 98 aa3.94□□□□□ -1.78
CHD9-204ENST00000561869 GSNP06396 782 aa3.94□□□□□ -1.78
CHD9-204ENST00000561869 C1QTNF9P0C862 333 aa3.94□□□□□ -1.78
CHD9-204ENST00000561869 KRTAP19-4Q3LI73 84 aa3.94□□□□□ -1.78
CHD9-204ENST00000561869 ZNF513Q8N8E2 541 aaPredicted RBP3.94□□□□□ -1.78
CHD9-204ENST00000561869 BRF1Q92994 677 aa3.94□□□□□ -1.78
CHD9-204ENST00000561869 SYTL4Q96C24 671 aaPredicted RBP3.94□□□□□ -1.78
CHD9-204ENST00000561869 INTS4Q96HW7 963 aaKnown RBP3.94□□□□□ -1.78
CHD9-204ENST00000561869 FCRL2Q96LA5 508 aaPredicted RBP3.94□□□□□ -1.78
CHD9-204ENST00000561869 PLCD4Q9BRC7 762 aa3.94□□□□□ -1.78
CHD9-204ENST00000561869 KLHL25Q9H0H3 589 aa3.94□□□□□ -1.78
CHD9-204ENST00000561869 CCSER2Q9H7U1 834 aa3.94□□□□□ -1.78
CHD9-204ENST00000561869 PHAXQ9H814 394 aaKnown RBP3.94□□□□□ -1.78
CHD9-204ENST00000561869 CWC22Q9HCG8 908 aaKnown RBP3.94□□□□□ -1.78
CHD9-204ENST00000561869 TNFRSF10DQ9UBN6 386 aa3.94□□□□□ -1.78
CHD9-204ENST00000561869 SUSD2Q9UGT4 822 aa3.94□□□□□ -1.78
CHD9-204ENST00000561869 ZMYM5Q9UJ78 669 aa3.94□□□□□ -1.78
CHD9-204ENST00000561869 FHOD1Q9Y613 1164 aa3.94□□□□□ -1.78
CHD9-204ENST00000561869 TCF3P15923 654 aa3.93□□□□□ -1.78
CHD9-204ENST00000561869 ERCC5P28715 1186 aaPredicted RBP3.93□□□□□ -1.78
CHD9-204ENST00000561869 KIR3DS1Q14943 382 aa3.93□□□□□ -1.78
CHD9-204ENST00000561869 HSF5Q4G112 596 aaPredicted RBP3.93□□□□□ -1.78
CHD9-204ENST00000561869 CEP128Q6ZU80 1094 aa3.93□□□□□ -1.78
CHD9-204ENST00000561869 SLCO6A1Q86UG4 719 aa3.93□□□□□ -1.78
CHD9-204ENST00000561869 IRF2BP1Q8IU81 584 aa3.93□□□□□ -1.78
CHD9-204ENST00000561869 FIBCD1Q8N539 461 aa3.93□□□□□ -1.78
CHD9-204ENST00000561869 FBXO15Q8NCQ5 510 aaPredicted RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms