RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 SMARCC1Q92922 1105 aaPredicted RBP4.55□□□□□ -1.68
SPG11-225ENST00000561391 ZKSCAN3Q9BRR0 538 aa4.55□□□□□ -1.68
SPG11-225ENST00000561391 BCL11AQ9H165 835 aa4.55□□□□□ -1.68
SPG11-225ENST00000561391 RASSF4Q9H2L5 321 aa4.55□□□□□ -1.68
SPG11-225ENST00000561391 MRS2Q9HD23 443 aa4.55□□□□□ -1.68
SPG11-225ENST00000561391 CCDC39Q9UFE4 941 aa4.55□□□□□ -1.68
SPG11-225ENST00000561391 NSD3Q9BZ95 1437 aa4.55□□□□□ -1.68
SPG11-225ENST00000561391 UBR3Q6ZT12 1888 aa4.54□□□□□ -1.68
SPG11-225ENST00000561391 TAF1LQ8IZX4 1826 aa4.54□□□□□ -1.68
SPG11-225ENST00000561391 A0A1W2PP55 124 aa4.54□□□□□ -1.68
SPG11-225ENST00000561391 H0YGN5 161 aa4.54□□□□□ -1.68
SPG11-225ENST00000561391 DDX3YO15523 660 aaKnown RBP4.54□□□□□ -1.68
SPG11-225ENST00000561391 KIF4AO95239 1232 aa4.54□□□□□ -1.68
SPG11-225ENST00000561391 FOSL1P15407 271 aa4.54□□□□□ -1.68
SPG11-225ENST00000561391 JUNBP17275 347 aaPredicted RBP4.54□□□□□ -1.68
SPG11-225ENST00000561391 FGD1P98174 961 aa4.54□□□□□ -1.68
SPG11-225ENST00000561391 DDR1Q08345 913 aa4.54□□□□□ -1.68
SPG11-225ENST00000561391 ITPK1Q13572 414 aa4.54□□□□□ -1.68
SPG11-225ENST00000561391 AKAP4Q5JQC9 854 aa4.54□□□□□ -1.68
SPG11-225ENST00000561391 PEAR1Q5VY43 1037 aaPredicted RBP4.54□□□□□ -1.68
SPG11-225ENST00000561391 NXPE4Q6UWF7 544 aa4.54□□□□□ -1.68
SPG11-225ENST00000561391 PNMA8AQ86V59 439 aaPredicted RBP4.54□□□□□ -1.68
SPG11-225ENST00000561391 FAM122AQ96E09 287 aa4.54□□□□□ -1.68
SPG11-225ENST00000561391 HHIPQ96QV1 700 aa4.54□□□□□ -1.68
SPG11-225ENST00000561391 PBX4Q9BYU1 374 aa4.54□□□□□ -1.68
SPG11-225ENST00000561391 RNF208Q9H0X6 261 aa4.54□□□□□ -1.68
SPG11-225ENST00000561391 LIN7BQ9HAP6 207 aa4.54□□□□□ -1.68
SPG11-225ENST00000561391 SEC31BQ9NQW1 1179 aa4.54□□□□□ -1.68
SPG11-225ENST00000561391 RNF186Q9NXI6 227 aa4.54□□□□□ -1.68
SPG11-225ENST00000561391 PPP4R2Q9NY27 417 aa4.54□□□□□ -1.68
SPG11-225ENST00000561391 SPG7Q9UQ90 795 aa4.54□□□□□ -1.68
SPG11-225ENST00000561391 CUL9Q8IWT3 2517 aa4.54□□□□□ -1.68
SPG11-225ENST00000561391 DOT1LQ8TEK3 1739 aa4.54□□□□□ -1.68
SPG11-225ENST00000561391 TOGARAM1Q9Y4F4 1720 aa4.54□□□□□ -1.68
SPG11-225ENST00000561391 COL6A3P12111 3177 aa4.54□□□□□ -1.68
SPG11-225ENST00000561391 ROCK1Q13464 1354 aa4.53□□□□□ -1.68
SPG11-225ENST00000561391 SZT2Q5T011 3432 aa4.53□□□□□ -1.68
SPG11-225ENST00000561391 SLIT3O75094 1523 aa4.53□□□□□ -1.68
SPG11-225ENST00000561391 TIAM2Q8IVF5 1701 aa4.53□□□□□ -1.68
SPG11-225ENST00000561391 METTL12A8MUP2 240 aa4.53□□□□□ -1.68
SPG11-225ENST00000561391 PDE2AO00408 941 aaPredicted RBP4.53□□□□□ -1.68
SPG11-225ENST00000561391 ADAM11O75078 769 aa4.53□□□□□ -1.68
SPG11-225ENST00000561391 CELF2O95319 508 aaKnown RBP4.53□□□□□ -1.68
SPG11-225ENST00000561391 EPHA1P21709 976 aa4.53□□□□□ -1.68
SPG11-225ENST00000561391 MAP4P27816 1152 aaKnown RBP4.53□□□□□ -1.68
SPG11-225ENST00000561391 GNA15P30679 374 aa4.53□□□□□ -1.68
SPG11-225ENST00000561391 CABP4P57796 275 aa4.53□□□□□ -1.68
SPG11-225ENST00000561391 GRM2Q14416 872 aa4.53□□□□□ -1.68
SPG11-225ENST00000561391 MSMPQ1L6U9 139 aa4.53□□□□□ -1.68
SPG11-225ENST00000561391 NPM2Q86SE8 214 aaKnown RBP4.53□□□□□ -1.68
SPG11-225ENST00000561391 SAPCD2Q86UD0 394 aa4.53□□□□□ -1.68
SPG11-225ENST00000561391 C2CD5Q86YS7 1000 aa4.53□□□□□ -1.68
SPG11-225ENST00000561391 FLCNQ8NFG4 579 aa4.53□□□□□ -1.68
SPG11-225ENST00000561391 FBF1Q8TES7 1133 aa4.53□□□□□ -1.68
SPG11-225ENST00000561391 POP1Q99575 1024 aaKnown RBP4.53□□□□□ -1.68
SPG11-225ENST00000561391 RUSC1Q9BVN2 902 aa4.53□□□□□ -1.68
SPG11-225ENST00000561391 BCO2Q9BYV7 579 aa4.53□□□□□ -1.68
SPG11-225ENST00000561391 DZANK1Q9NVP4 752 aa4.53□□□□□ -1.68
SPG11-225ENST00000561391 VTI1BQ9UEU0 232 aa4.53□□□□□ -1.68
SPG11-225ENST00000561391 SRP68Q9UHB9 627 aaKnown RBP4.53□□□□□ -1.68
SPG11-225ENST00000561391 HDAC9Q9UKV0 1011 aa4.53□□□□□ -1.68
SPG11-225ENST00000561391 C4AP0C0L4 1744 aa4.52□□□□□ -1.69
SPG11-225ENST00000561391 RNF123Q5XPI4 1314 aa4.52□□□□□ -1.69
SPG11-225ENST00000561391 UNCXA6NJT0 531 aa4.52□□□□□ -1.69
SPG11-225ENST00000561391 H0YIN7 160 aa4.52□□□□□ -1.69
SPG11-225ENST00000561391 SORBS3O60504 671 aa4.52□□□□□ -1.69
SPG11-225ENST00000561391 PTPRAP18433 802 aa4.52□□□□□ -1.69
SPG11-225ENST00000561391 EN2P19622 333 aaPredicted RBP4.52□□□□□ -1.69
SPG11-225ENST00000561391 EIF4BP23588 611 aaKnown RBP4.52□□□□□ -1.69
SPG11-225ENST00000561391 PLA2G5P39877 138 aa4.52□□□□□ -1.69
SPG11-225ENST00000561391 FCGRTP55899 365 aa4.52□□□□□ -1.69
SPG11-225ENST00000561391 NLRP12P59046 1061 aa4.52□□□□□ -1.69
SPG11-225ENST00000561391 KIF23Q02241 960 aaPredicted RBP4.52□□□□□ -1.69
SPG11-225ENST00000561391 PKN2Q16513 984 aaKnown RBP4.52□□□□□ -1.69
SPG11-225ENST00000561391 CPSF6Q16630 551 aaKnown RBP eCLIP4.52□□□□□ -1.69
SPG11-225ENST00000561391 KIAA0319Q5VV43 1072 aa4.52□□□□□ -1.69
SPG11-225ENST00000561391 CBLL1Q75N03 491 aa4.52□□□□□ -1.69
SPG11-225ENST00000561391 AGBL5Q8NDL9 886 aa4.52□□□□□ -1.69
SPG11-225ENST00000561391 PIGBQ92521 554 aa4.52□□□□□ -1.69
SPG11-225ENST00000561391 ZNF622Q969S3 477 aaKnown RBP eCLIP4.52□□□□□ -1.693e-10■□□□□ 9.2
SPG11-225ENST00000561391 MRRFQ96E11 262 aaKnown RBP4.52□□□□□ -1.69
SPG11-225ENST00000561391 METTL22Q9BUU2 404 aaPredicted RBP4.52□□□□□ -1.69
SPG11-225ENST00000561391 OSBPL7Q9BZF2 842 aa4.52□□□□□ -1.69
SPG11-225ENST00000561391 ZNF408Q9H9D4 720 aa4.52□□□□□ -1.69
SPG11-225ENST00000561391 AKAP2Q9Y2D5 859 aa4.52□□□□□ -1.69
SPG11-225ENST00000561391 TTC21BQ7Z4L5 1316 aa4.51□□□□□ -1.69
SPG11-225ENST00000561391 THSD7BQ9C0I4 1608 aa4.51□□□□□ -1.69
SPG11-225ENST00000561391 PRNPP04156 253 aa4.51□□□□□ -1.69
SPG11-225ENST00000561391 F13BP05160 661 aa4.51□□□□□ -1.69
SPG11-225ENST00000561391 ITGB5P18084 799 aa4.51□□□□□ -1.69
SPG11-225ENST00000561391 DAB2P98082 770 aa4.51□□□□□ -1.69
SPG11-225ENST00000561391 NOGQ13253 232 aa4.51□□□□□ -1.69
SPG11-225ENST00000561391 PKN1Q16512 942 aa4.51□□□□□ -1.69
SPG11-225ENST00000561391 SPRED3Q2MJR0 410 aa4.51□□□□□ -1.69
SPG11-225ENST00000561391 FBLN7Q53RD9 439 aa4.51□□□□□ -1.69
SPG11-225ENST00000561391 SGO2Q562F6 1265 aa4.51□□□□□ -1.69
SPG11-225ENST00000561391 ZNF648Q5T619 568 aaPredicted RBP4.51□□□□□ -1.69
SPG11-225ENST00000561391 DTHD1Q6ZMT9 781 aa4.51□□□□□ -1.69
SPG11-225ENST00000561391 TMC4Q7Z404 712 aa4.51□□□□□ -1.69
SPG11-225ENST00000561391 NXPE3Q969Y0 559 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms