RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 ZNF605Q86T29 641 aa6.45□□□□□ -1.38
CASC4-211ENST00000561305 TAB3Q8N5C8 712 aaPredicted RBP6.45□□□□□ -1.38
CASC4-211ENST00000561305 MKRN2Q9H000 416 aaKnown RBP6.45□□□□□ -1.38
CASC4-211ENST00000561305 CRTAC1Q9NQ79 661 aa6.45□□□□□ -1.38
CASC4-211ENST00000561305 PCDHB12Q9Y5F1 795 aa6.45□□□□□ -1.38
CASC4-211ENST00000561305 TEX51A0A1B0GUA7 166 aa6.44□□□□□ -1.38
CASC4-211ENST00000561305 ZBTB7CA1YPR0 619 aa6.44□□□□□ -1.38
CASC4-211ENST00000561305 ZSCAN22P10073 491 aaPredicted RBP6.44□□□□□ -1.38
CASC4-211ENST00000561305 BMP8BP34820 402 aa6.44□□□□□ -1.38
CASC4-211ENST00000561305 PDE6BP35913 854 aa6.44□□□□□ -1.38
CASC4-211ENST00000561305 CTSKP43235 329 aa6.44□□□□□ -1.38
CASC4-211ENST00000561305 GALK1P51570 392 aa6.44□□□□□ -1.38
CASC4-211ENST00000561305 DLG4P78352 724 aa6.44□□□□□ -1.38
CASC4-211ENST00000561305 SLC14A2Q15849 920 aa6.44□□□□□ -1.38
CASC4-211ENST00000561305 FCRL2Q96LA5 508 aaPredicted RBP6.44□□□□□ -1.38
CASC4-211ENST00000561305 DHRS1Q96LJ7 313 aa6.44□□□□□ -1.38
CASC4-211ENST00000561305 GCM1Q9NP62 436 aa6.44□□□□□ -1.38
CASC4-211ENST00000561305 GFOD1Q9NXC2 390 aa6.44□□□□□ -1.38
CASC4-211ENST00000561305 TNFRSF10DQ9UBN6 386 aa6.44□□□□□ -1.38
CASC4-211ENST00000561305 SUCOQ9UBS9 1254 aaKnown RBP6.44□□□□□ -1.38
CASC4-211ENST00000561305 OR14I1A6ND48 311 aa6.43□□□□□ -1.38
CASC4-211ENST00000561305 FADS2P1A8MWK0 482 aa6.43□□□□□ -1.38
CASC4-211ENST00000561305 HRKO00198 91 aa6.43□□□□□ -1.38
CASC4-211ENST00000561305 FKTNO75072 461 aa6.43□□□□□ -1.38
CASC4-211ENST00000561305 ZNF205O95201 554 aa6.43□□□□□ -1.38
CASC4-211ENST00000561305 ENDOUP21128 410 aaKnown RBP6.43□□□□□ -1.38
CASC4-211ENST00000561305 ZNF394Q53GI3 561 aa6.43□□□□□ -1.38
CASC4-211ENST00000561305 CEP128Q6ZU80 1094 aa6.43□□□□□ -1.38
CASC4-211ENST00000561305 RBBP8NLQ8NC74 664 aaPredicted RBP6.43□□□□□ -1.38
CASC4-211ENST00000561305 FBXL21Q9UKT6 434 aa6.43□□□□□ -1.38
CASC4-211ENST00000561305 C9IYK1 514 aa6.42□□□□□ -1.38
CASC4-211ENST00000561305 PNLIPP16233 465 aa6.42□□□□□ -1.38
CASC4-211ENST00000561305 VAMP1P23763 118 aa6.42□□□□□ -1.38
CASC4-211ENST00000561305 CEBPAP49715 358 aaPredicted RBP6.42□□□□□ -1.38
CASC4-211ENST00000561305 PMS1P54277 932 aaKnown RBP6.42□□□□□ -1.38
CASC4-211ENST00000561305 MFAP1P55081 439 aaKnown RBP6.42□□□□□ -1.38
CASC4-211ENST00000561305 LINC00310P59036 64 aa6.42□□□□□ -1.38
CASC4-211ENST00000561305 RACK1P63244 317 aaKnown RBP6.42□□□□□ -1.38
CASC4-211ENST00000561305 CIAPIN1Q6FI81 312 aa6.42□□□□□ -1.38
CASC4-211ENST00000561305 SIRT2Q8IXJ6 389 aa6.42□□□□□ -1.38
CASC4-211ENST00000561305 C7orf61Q8IZ16 206 aa6.42□□□□□ -1.38
CASC4-211ENST00000561305 RNF34Q969K3 372 aa6.42□□□□□ -1.38
CASC4-211ENST00000561305 TM9SF2Q99805 663 aa6.42□□□□□ -1.38
CASC4-211ENST00000561305 DDX41Q9UJV9 622 aaKnown RBP6.42□□□□□ -1.38
CASC4-211ENST00000561305 PCDHGB7Q9Y5F8 929 aa6.42□□□□□ -1.38
CASC4-211ENST00000561305 SHOXO15266 292 aa6.41□□□□□ -1.38
CASC4-211ENST00000561305 VAV1P15498 845 aa6.41□□□□□ -1.38
CASC4-211ENST00000561305 RTP1P59025 263 aa6.41□□□□□ -1.38
CASC4-211ENST00000561305 ANKRD39Q53RE8 183 aa6.41□□□□□ -1.38
CASC4-211ENST00000561305 ADGRF1Q5T601 910 aa6.41□□□□□ -1.38
CASC4-211ENST00000561305 SMARCC1Q92922 1105 aaPredicted RBP6.41□□□□□ -1.38
CASC4-211ENST00000561305 FERD3LQ96RJ6 166 aa6.41□□□□□ -1.38
CASC4-211ENST00000561305 PLCD4Q9BRC7 762 aa6.41□□□□□ -1.38
CASC4-211ENST00000561305 ERVK13-1Q9NX77 482 aa6.41□□□□□ -1.38
CASC4-211ENST00000561305 GSNP06396 782 aa6.4□□□□□ -1.38
CASC4-211ENST00000561305 ERVFRD-1P60508 538 aa6.4□□□□□ -1.38
CASC4-211ENST00000561305 HSF5Q4G112 596 aaPredicted RBP6.4□□□□□ -1.38
CASC4-211ENST00000561305 TMEM132EQ6IEE7 984 aa6.4□□□□□ -1.38
CASC4-211ENST00000561305 GALNT18Q6P9A2 607 aa6.4□□□□□ -1.38
CASC4-211ENST00000561305 PPFIBP1Q86W92 1011 aa6.4□□□□□ -1.38
CASC4-211ENST00000561305 FAM86C2PA6NEL3 165 aa6.39□□□□□ -1.39
CASC4-211ENST00000561305 WTIPA6NIX2 430 aaPredicted RBP6.39□□□□□ -1.39
CASC4-211ENST00000561305 MEIS1O00470 390 aa6.39□□□□□ -1.39
CASC4-211ENST00000561305 NUAK1O60285 661 aa6.39□□□□□ -1.39
CASC4-211ENST00000561305 RECKO95980 971 aa6.39□□□□□ -1.39
CASC4-211ENST00000561305 YBX1P67809 324 aaKnown RBP6.39□□□□□ -1.39
CASC4-211ENST00000561305 COL9A2Q14055 689 aaPredicted RBP6.39□□□□□ -1.39
CASC4-211ENST00000561305 RTP2Q5QGT7 225 aa6.39□□□□□ -1.39
CASC4-211ENST00000561305 CRTC3Q6UUV7 619 aa6.39□□□□□ -1.39
CASC4-211ENST00000561305 SLCO6A1Q86UG4 719 aa6.39□□□□□ -1.39
CASC4-211ENST00000561305 CCDC144CPQ8IYA2 1237 aa6.39□□□□□ -1.39
CASC4-211ENST00000561305 TMEM52Q8NDY8 209 aa6.39□□□□□ -1.39
CASC4-211ENST00000561305 SGPP1Q9BX95 441 aa6.39□□□□□ -1.39
CASC4-211ENST00000561305 GPR55Q9Y2T6 319 aaPredicted RBP6.39□□□□□ -1.39
CASC4-211ENST00000561305 A0A1W2PQ45 241 aaPredicted RBP6.38□□□□□ -1.39
CASC4-211ENST00000561305 A0A1W2PQY0 241 aa6.38□□□□□ -1.39
CASC4-211ENST00000561305 SCAMP3O14828 347 aaKnown RBP6.38□□□□□ -1.39
CASC4-211ENST00000561305 SRSF3P84103 164 aaKnown RBP6.38□□□□□ -1.39
CASC4-211ENST00000561305 KIR3DS1Q14943 382 aa6.38□□□□□ -1.39
CASC4-211ENST00000561305 UNC5AQ6ZN44 842 aa6.38□□□□□ -1.39
CASC4-211ENST00000561305 CDADC1Q9BWV3 514 aa6.38□□□□□ -1.39
CASC4-211ENST00000561305 SRRTQ9BXP5 876 aaKnown RBP6.38□□□□□ -1.39
CASC4-211ENST00000561305 AP5S1Q9NUS5 200 aa6.38□□□□□ -1.39
CASC4-211ENST00000561305 RAPGEFL1Q9UHV5 662 aa6.38□□□□□ -1.39
CASC4-211ENST00000561305 MBD1Q9UIS9 605 aaPredicted RBP6.38□□□□□ -1.39
CASC4-211ENST00000561305 ACSL6Q9UKU0 697 aa6.38□□□□□ -1.39
CASC4-211ENST00000561305 PPT2Q9UMR5 302 aa6.38□□□□□ -1.39
CASC4-211ENST00000561305 KRTAP9-7A8MTY7 169 aa6.37□□□□□ -1.39
CASC4-211ENST00000561305 GUCY2CP25092 1073 aa6.37□□□□□ -1.39
CASC4-211ENST00000561305 ZNF445P59923 1031 aa6.37□□□□□ -1.39
CASC4-211ENST00000561305 LAPTM5Q13571 262 aa6.37□□□□□ -1.39
CASC4-211ENST00000561305 ZYXQ15942 572 aaKnown RBP6.37□□□□□ -1.39
CASC4-211ENST00000561305 AXDND1Q5T1B0 1012 aaPredicted RBP6.37□□□□□ -1.39
CASC4-211ENST00000561305 TDRD10Q5VZ19 366 aaKnown RBP6.37□□□□□ -1.39
CASC4-211ENST00000561305 DCAF15Q66K64 600 aa6.37□□□□□ -1.39
CASC4-211ENST00000561305 RUFY4Q6ZNE9 571 aa6.37□□□□□ -1.39
CASC4-211ENST00000561305 TTLL10Q6ZVT0 673 aa6.37□□□□□ -1.39
CASC4-211ENST00000561305 METTL16Q86W50 562 aaKnown RBP6.37□□□□□ -1.39
CASC4-211ENST00000561305 LSRQ86X29 649 aaPredicted RBP6.37□□□□□ -1.39
CASC4-211ENST00000561305 ZNF654Q8IZM8 581 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms