RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 CNOT11Q9UKZ1 510 aaKnown RBP5.61□□□□□ -1.51
SPG11-222ENST00000560435 WTIPA6NIX2 430 aaPredicted RBP5.6□□□□□ -1.51
SPG11-222ENST00000560435 GRIN3BO60391 1043 aa5.6□□□□□ -1.51
SPG11-222ENST00000560435 FKTNO75072 461 aa5.6□□□□□ -1.51
SPG11-222ENST00000560435 RTP5Q14D33 572 aa5.6□□□□□ -1.51
SPG11-222ENST00000560435 RAB3GAP1Q15042 981 aa5.6□□□□□ -1.51
SPG11-222ENST00000560435 NBPF9Q3BBW0 867 aa5.6□□□□□ -1.51
SPG11-222ENST00000560435 RHOVQ96L33 236 aa5.6□□□□□ -1.51
SPG11-222ENST00000560435 TNFRSF12AQ9NP84 129 aa5.6□□□□□ -1.51
SPG11-222ENST00000560435 GPR55Q9Y2T6 319 aaPredicted RBP5.6□□□□□ -1.51
SPG11-222ENST00000560435 IVNS1ABPQ9Y6Y0 642 aa5.6□□□□□ -1.51
SPG11-222ENST00000560435 BUB1BO60566 1050 aaPredicted RBP5.59□□□□□ -1.51
SPG11-222ENST00000560435 UBOX5O94941 541 aa5.59□□□□□ -1.51
SPG11-222ENST00000560435 PF4P02776 101 aa5.59□□□□□ -1.51
SPG11-222ENST00000560435 ENDOUP21128 410 aaKnown RBP5.59□□□□□ -1.51
SPG11-222ENST00000560435 CBX2Q14781 532 aaPredicted RBP5.59□□□□□ -1.51
SPG11-222ENST00000560435 KIR3DS1Q14943 382 aa5.59□□□□□ -1.51
SPG11-222ENST00000560435 ZFYVE27Q5T4F4 411 aa5.59□□□□□ -1.51
SPG11-222ENST00000560435 NBPF12Q5TAG4 269 aaPredicted RBP5.59□□□□□ -1.51
SPG11-222ENST00000560435 C14orf37Q86TY3 774 aa5.59□□□□□ -1.51
SPG11-222ENST00000560435 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.59□□□□□ -1.51
SPG11-222ENST00000560435 MYRFQ9Y2G1 1151 aa5.59□□□□□ -1.51
SPG11-222ENST00000560435 FFAR3O14843 346 aa5.58□□□□□ -1.52
SPG11-222ENST00000560435 SIGLEC6O43699 453 aa5.58□□□□□ -1.52
SPG11-222ENST00000560435 PRAMEF1O95521 474 aa5.58□□□□□ -1.52
SPG11-222ENST00000560435 INSRRP14616 1297 aa5.58□□□□□ -1.52
SPG11-222ENST00000560435 IGFBP6P24592 240 aaPredicted RBP5.58□□□□□ -1.52
SPG11-222ENST00000560435 KCNC1P48547 511 aa5.58□□□□□ -1.52
SPG11-222ENST00000560435 SNW1Q13573 536 aaKnown RBP5.58□□□□□ -1.52
SPG11-222ENST00000560435 MPP2Q14168 576 aa5.58□□□□□ -1.52
SPG11-222ENST00000560435 SLCO6A1Q86UG4 719 aa5.58□□□□□ -1.52
SPG11-222ENST00000560435 NLGN1Q8N2Q7 840 aa5.58□□□□□ -1.52
SPG11-222ENST00000560435 ACSL6Q9UKU0 697 aa5.58□□□□□ -1.52
SPG11-222ENST00000560435 USP31Q70CQ4 1352 aa5.57□□□□□ -1.52
SPG11-222ENST00000560435 IRS2Q9Y4H2 1338 aa5.57□□□□□ -1.52
SPG11-222ENST00000560435 NUDT19A8MXV4 375 aa5.57□□□□□ -1.52
SPG11-222ENST00000560435 PRICKLE3O43900 615 aaPredicted RBP5.57□□□□□ -1.52
SPG11-222ENST00000560435 PRKCAP17252 672 aa5.57□□□□□ -1.52
SPG11-222ENST00000560435 SLURP1P55000 103 aa5.57□□□□□ -1.52
SPG11-222ENST00000560435 CYP4F8P98187 520 aa5.57□□□□□ -1.52
SPG11-222ENST00000560435 MLECQ14165 292 aa5.57□□□□□ -1.52
SPG11-222ENST00000560435 PUM1Q14671 1186 aaKnown RBP eCLIP5.57□□□□□ -1.52
SPG11-222ENST00000560435 HHIPL2Q6UWX4 724 aa5.57□□□□□ -1.52
SPG11-222ENST00000560435 REC114Q7Z4M0 266 aa5.57□□□□□ -1.52
SPG11-222ENST00000560435 ERVK13-1Q9NX77 482 aa5.57□□□□□ -1.52
SPG11-222ENST00000560435 A0A1W2PQ45 241 aaPredicted RBP5.56□□□□□ -1.52
SPG11-222ENST00000560435 A0A1W2PQY0 241 aa5.56□□□□□ -1.52
SPG11-222ENST00000560435 F6X3S4 739 aa5.56□□□□□ -1.52
SPG11-222ENST00000560435 RAG1P15918 1043 aa5.56□□□□□ -1.52
SPG11-222ENST00000560435 PFKLP17858 780 aa5.56□□□□□ -1.52
SPG11-222ENST00000560435 NCKAP1LP55160 1127 aa5.56□□□□□ -1.52
SPG11-222ENST00000560435 RAD51AP2Q09MP3 1159 aa5.56□□□□□ -1.52
SPG11-222ENST00000560435 PLEKHN1Q494U1 663 aaPredicted RBP5.56□□□□□ -1.52
SPG11-222ENST00000560435 ARSHQ5FYA8 562 aa5.56□□□□□ -1.52
SPG11-222ENST00000560435 RPTNQ6XPR3 784 aa5.56□□□□□ -1.52
SPG11-222ENST00000560435 NUP43Q8NFH3 380 aa5.56□□□□□ -1.52
SPG11-222ENST00000560435 TMEM74Q96NL1 305 aa5.56□□□□□ -1.52
SPG11-222ENST00000560435 K7ESM1 405 aa5.55□□□□□ -1.52
SPG11-222ENST00000560435 CTSHP09668 335 aa5.55□□□□□ -1.52
SPG11-222ENST00000560435 MAPKAPK2P49137 400 aa5.55□□□□□ -1.52
SPG11-222ENST00000560435 CEBPAP49715 358 aaPredicted RBP5.55□□□□□ -1.52
SPG11-222ENST00000560435 DAB2P98082 770 aa5.55□□□□□ -1.52
SPG11-222ENST00000560435 KCNA1Q09470 495 aa5.55□□□□□ -1.52
SPG11-222ENST00000560435 NR1I3Q14994 352 aa5.55□□□□□ -1.52
SPG11-222ENST00000560435 EAPPQ56P03 285 aaPredicted RBP5.55□□□□□ -1.52
SPG11-222ENST00000560435 EAF1Q96JC9 268 aaPredicted RBP5.55□□□□□ -1.52
SPG11-222ENST00000560435 GPR20Q99678 358 aa5.55□□□□□ -1.52
SPG11-222ENST00000560435 PRDM14Q9GZV8 571 aa5.55□□□□□ -1.52
SPG11-222ENST00000560435 CHST7Q9NS84 486 aa5.55□□□□□ -1.52
SPG11-222ENST00000560435 PARP2Q9UGN5 583 aa5.55□□□□□ -1.52
SPG11-222ENST00000560435 PALD1Q9ULE6 856 aa5.55□□□□□ -1.52
SPG11-222ENST00000560435 ZNF205O95201 554 aa5.54□□□□□ -1.52
SPG11-222ENST00000560435 GBP2P32456 591 aaPredicted RBP5.54□□□□□ -1.52
SPG11-222ENST00000560435 BMP8BP34820 402 aa5.54□□□□□ -1.52
SPG11-222ENST00000560435 LIMS1P48059 325 aa5.54□□□□□ -1.52
SPG11-222ENST00000560435 PSMD2Q13200 908 aa5.54□□□□□ -1.52
SPG11-222ENST00000560435 PWP1Q13610 501 aa5.54□□□□□ -1.52
SPG11-222ENST00000560435 ZNF827Q17R98 1081 aa5.54□□□□□ -1.52
SPG11-222ENST00000560435 VWA3BQ502W6 1294 aa5.54□□□□□ -1.52
SPG11-222ENST00000560435 SNAP47Q5SQN1 464 aa5.54□□□□□ -1.52
SPG11-222ENST00000560435 ZC3H14Q6PJT7 736 aaKnown RBP5.54□□□□□ -1.52
SPG11-222ENST00000560435 RELL1Q8IUW5 271 aa5.54□□□□□ -1.52
SPG11-222ENST00000560435 FBXO27Q8NI29 283 aa5.54□□□□□ -1.52
SPG11-222ENST00000560435 RSRP1Q9BUV0 290 aa5.54□□□□□ -1.52
SPG11-222ENST00000560435 GMIPQ9P107 970 aa5.54□□□□□ -1.52
SPG11-222ENST00000560435 IMPACTQ9P2X3 320 aa5.54□□□□□ -1.52
SPG11-222ENST00000560435 MSL3P1P0C860 447 aa5.53□□□□□ -1.52
SPG11-222ENST00000560435 ZNF200P98182 395 aaPredicted RBP5.53□□□□□ -1.52
SPG11-222ENST00000560435 FAM160A1Q05DH4 1040 aa5.53□□□□□ -1.52
SPG11-222ENST00000560435 TARBP2Q15633 366 aaKnown RBP5.53□□□□□ -1.52
SPG11-222ENST00000560435 UBXN11Q5T124 520 aa5.53□□□□□ -1.52
SPG11-222ENST00000560435 LIPIQ6XZB0 460 aa5.53□□□□□ -1.52
SPG11-222ENST00000560435 GOLM1Q8NBJ4 401 aa5.53□□□□□ -1.52
SPG11-222ENST00000560435 CDADC1Q9BWV3 514 aa5.53□□□□□ -1.52
SPG11-222ENST00000560435 USP40Q9NVE5 1235 aa5.53□□□□□ -1.52
SPG11-222ENST00000560435 MINPP1Q9UNW1 487 aa5.53□□□□□ -1.52
SPG11-222ENST00000560435 CLEC3AO75596 197 aa5.52□□□□□ -1.53
SPG11-222ENST00000560435 GARTP22102 1010 aa5.52□□□□□ -1.53
SPG11-222ENST00000560435 FBLN1P23142 703 aa5.52□□□□□ -1.53
SPG11-222ENST00000560435 CWF19L2Q2TBE0 894 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms