RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 LSM14BQ9BX40 385 aaKnown RBP15.35■□□□□ 0.05
SPG11-210ENST00000558319 RAB17Q9H0T7 212 aa15.35■□□□□ 0.05
SPG11-210ENST00000558319 RTEL1Q9NZ71 1219 aa15.35■□□□□ 0.05
SPG11-210ENST00000558319 VAMP4O75379 141 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 ZMYND10O75800 440 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 KCNA6P17658 529 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 KIF9Q9HAQ2 790 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 ANKRD36BQ8N2N9 1353 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 CCDC93Q567U6 631 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 CROCCP2Q86T23 111 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 N4BP2L2Q92802 583 aaPredicted RBP15.34■□□□□ 0.05
SPG11-210ENST00000558319 LRWD1Q9UFC0 647 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 NCOA1Q15788 1441 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 EFCAB5A4FU69 1503 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 TRAF1Q13077 416 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 RCN2Q14257 317 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 NIM1KQ8IY84 436 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 DIS3L2Q8IYB7 885 aaKnown RBP15.34■□□□□ 0.05
SPG11-210ENST00000558319 USP21Q9UK80 565 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 TTC41PQ6P2S7 1318 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 IRX4P78413 519 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 SYCE1Q8N0S2 351 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 SPATA5Q8NB90 893 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 RMDN2Q96LZ7 410 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 DCTPP1Q9H773 170 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 IL16Q14005 1332 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 TRPA1O75762 1119 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 TCIRG1Q13488 830 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 FAM133BQ5BKY9 247 aaKnown RBP15.34■□□□□ 0.05
SPG11-210ENST00000558319 DNAJC10Q8IXB1 793 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 MLKLQ8NB16 471 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 U2AF1L4Q8WU68 220 aaKnown RBP15.34■□□□□ 0.05
SPG11-210ENST00000558319 Q9H521 79 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 SMYD2Q9NRG4 433 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 DNM3Q9UQ16 869 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 FAN1Q9Y2M0 1017 aa15.34■□□□□ 0.05
SPG11-210ENST00000558319 ATL3Q6DD88 541 aa15.33■□□□□ 0.05
SPG11-210ENST00000558319 ZNF790Q6PG37 636 aa15.33■□□□□ 0.05
SPG11-210ENST00000558319 CARD10Q9BWT7 1032 aa15.33■□□□□ 0.05
SPG11-210ENST00000558319 NPATQ14207 1427 aa15.33■□□□□ 0.04
SPG11-210ENST00000558319 IFNB1P01574 187 aa15.33■□□□□ 0.04
SPG11-210ENST00000558319 PHEXP78562 749 aa15.33■□□□□ 0.04
SPG11-210ENST00000558319 SULF1Q8IWU6 871 aa15.33■□□□□ 0.04
SPG11-210ENST00000558319 PGBD1Q96JS3 809 aa15.33■□□□□ 0.04
SPG11-210ENST00000558319 PPP2R2CQ9Y2T4 447 aa15.33■□□□□ 0.04
SPG11-210ENST00000558319 PNMA6EA0A0J9YXQ4 647 aa15.33■□□□□ 0.04
SPG11-210ENST00000558319 SLC12A1Q13621 1099 aa15.33■□□□□ 0.04
SPG11-210ENST00000558319 KRT81Q14533 505 aa15.33■□□□□ 0.04
SPG11-210ENST00000558319 IQGAP2Q13576 1575 aa15.33■□□□□ 0.04
SPG11-210ENST00000558319 MAP3K1Q13233 1512 aa15.33■□□□□ 0.04
SPG11-210ENST00000558319 SNAP25P60880 206 aa15.33■□□□□ 0.04
SPG11-210ENST00000558319 SBNO1A3KN83 1393 aa15.33■□□□□ 0.04
SPG11-210ENST00000558319 DLGAP5Q15398 846 aa15.33■□□□□ 0.04
SPG11-210ENST00000558319 DCAF5Q96JK2 942 aa15.33■□□□□ 0.04
SPG11-210ENST00000558319 SCYL1Q96KG9 808 aa15.33■□□□□ 0.04
SPG11-210ENST00000558319 CUTAO60888 179 aa15.32■□□□□ 0.04
SPG11-210ENST00000558319 DEXIO95424 95 aa15.32■□□□□ 0.04
SPG11-210ENST00000558319 ADCY8P40145 1251 aa15.32■□□□□ 0.04
SPG11-210ENST00000558319 POMGNT1Q8WZA1 660 aa15.32■□□□□ 0.04
SPG11-210ENST00000558319 HELLSQ9NRZ9 838 aa15.32■□□□□ 0.04
SPG11-210ENST00000558319 PDE8AO60658 829 aa15.32■□□□□ 0.04
SPG11-210ENST00000558319 GOLGA8FQ08AF8 430 aa15.32■□□□□ 0.04
SPG11-210ENST00000558319 GOLGA8DPQ0D2H9 430 aa15.32■□□□□ 0.04
SPG11-210ENST00000558319 NAA35Q5VZE5 725 aa15.32■□□□□ 0.04
SPG11-210ENST00000558319 EEPD1Q7L9B9 569 aa15.32■□□□□ 0.04
SPG11-210ENST00000558319 AMFRQ9UKV5 643 aa15.32■□□□□ 0.04
SPG11-210ENST00000558319 ATF7P17544 494 aaPredicted RBP15.32■□□□□ 0.04
SPG11-210ENST00000558319 BRDTQ58F21 947 aaPredicted RBP15.32■□□□□ 0.04
SPG11-210ENST00000558319 RSAD2Q8WXG1 361 aa15.32■□□□□ 0.04
SPG11-210ENST00000558319 RIMS2Q9UQ26 1411 aa15.32■□□□□ 0.04
SPG11-210ENST00000558319 DENND4BO75064 1496 aaPredicted RBP15.32■□□□□ 0.04
SPG11-210ENST00000558319 CHAMP1Q96JM3 812 aa15.32■□□□□ 0.04
SPG11-210ENST00000558319 SH2D4AQ9H788 454 aa15.32■□□□□ 0.04
SPG11-210ENST00000558319 BCAP29Q9UHQ4 241 aa15.32■□□□□ 0.04
SPG11-210ENST00000558319 INTUQ9ULD6 942 aa15.32■□□□□ 0.04
SPG11-210ENST00000558319 PYCARDQ9ULZ3 195 aa15.32■□□□□ 0.04
SPG11-210ENST00000558319 FIS1Q9Y3D6 152 aa15.32■□□□□ 0.04
SPG11-210ENST00000558319 KDRP35968 1356 aa15.32■□□□□ 0.04
SPG11-210ENST00000558319 ZBTB17Q13105 803 aa15.32■□□□□ 0.04
SPG11-210ENST00000558319 MAP3K21Q5TCX8 1036 aa15.32■□□□□ 0.04
SPG11-210ENST00000558319 ATP2A3Q93084 1043 aa15.32■□□□□ 0.04
SPG11-210ENST00000558319 SLC24A3Q9HC58 644 aa15.32■□□□□ 0.04
SPG11-210ENST00000558319 TSKSQ9UJT2 592 aa15.32■□□□□ 0.04
SPG11-210ENST00000558319 CFAP65Q6ZU64 1925 aaKnown RBP15.32■□□□□ 0.04
SPG11-210ENST00000558319 NR1I2O75469 434 aa15.31■□□□□ 0.04
SPG11-210ENST00000558319 OATP04181 439 aa15.31■□□□□ 0.04
SPG11-210ENST00000558319 LRRC8AQ8IWT6 810 aa15.31■□□□□ 0.04
SPG11-210ENST00000558319 ABCC1P33527 1531 aa15.31■□□□□ 0.04
SPG11-210ENST00000558319 EFCAB8A8MWE9 144 aa15.31■□□□□ 0.04
SPG11-210ENST00000558319 KCNQ3O43525 872 aa15.31■□□□□ 0.04
SPG11-210ENST00000558319 BCAMP50895 628 aa15.31■□□□□ 0.04
SPG11-210ENST00000558319 SLC12A2P55011 1212 aa15.31■□□□□ 0.04
SPG11-210ENST00000558319 RYBPQ8N488 228 aaPredicted RBP15.31■□□□□ 0.04
SPG11-210ENST00000558319 NSMCE1Q8WV22 266 aa15.31■□□□□ 0.04
SPG11-210ENST00000558319 THAP12O43422 761 aa15.31■□□□□ 0.04
SPG11-210ENST00000558319 CACNB1Q02641 598 aaPredicted RBP15.31■□□□□ 0.04
SPG11-210ENST00000558319 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.31■□□□□ 0.04
SPG11-210ENST00000558319 NME8Q8N427 588 aa15.31■□□□□ 0.04
SPG11-210ENST00000558319 PARP2Q9UGN5 583 aa15.31■□□□□ 0.04
SPG11-210ENST00000558319 CAPN9O14815 690 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms