RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 TRIM47Q96LD4 638 aa19.58■□□□□ 0.72
PBX4-202ENST00000557978 SPATC1LQ9H0A9 340 aa19.58■□□□□ 0.72
PBX4-202ENST00000557978 CWC22Q9HCG8 908 aaKnown RBP19.58■□□□□ 0.72
PBX4-202ENST00000557978 PEX10O60683 326 aa19.57■□□□□ 0.72
PBX4-202ENST00000557978 CTGFP29279 349 aa19.57■□□□□ 0.72
PBX4-202ENST00000557978 TMEM132BQ14DG7 1078 aa19.57■□□□□ 0.72
PBX4-202ENST00000557978 ASPRV1Q53RT3 343 aa19.57■□□□□ 0.72
PBX4-202ENST00000557978 BTNL9Q6UXG8 535 aa19.57■□□□□ 0.72
PBX4-202ENST00000557978 RASGRP2Q7LDG7 609 aa19.57■□□□□ 0.72
PBX4-202ENST00000557978 CATIPQ7Z7H3 387 aa19.57■□□□□ 0.72
PBX4-202ENST00000557978 JAKMIP1Q96N16 626 aaKnown RBP19.57■□□□□ 0.72
PBX4-202ENST00000557978 SLC38A10Q9HBR0 1119 aa19.57■□□□□ 0.72
PBX4-202ENST00000557978 FRMPD2Q68DX3 1309 aaPredicted RBP19.56■□□□□ 0.72
PBX4-202ENST00000557978 CCDC69A6NI79 296 aa19.56■□□□□ 0.72
PBX4-202ENST00000557978 SH2B2O14492 632 aaPredicted RBP19.56■□□□□ 0.72
PBX4-202ENST00000557978 SLC25A27O95847 323 aa19.56■□□□□ 0.72
PBX4-202ENST00000557978 PARP1P09874 1014 aaKnown RBP19.56■□□□□ 0.72
PBX4-202ENST00000557978 STAT3P40763 770 aa19.56■□□□□ 0.72
PBX4-202ENST00000557978 OAZ1P54368 228 aa19.56■□□□□ 0.72
PBX4-202ENST00000557978 CAP1Q01518 475 aa19.56■□□□□ 0.72
PBX4-202ENST00000557978 EXOSC10Q01780 885 aaKnown RBP19.56■□□□□ 0.72
PBX4-202ENST00000557978 FBXO46Q6PJ61 603 aaPredicted RBP19.56■□□□□ 0.72
PBX4-202ENST00000557978 BLOC1S2Q6QNY1 142 aa19.56■□□□□ 0.72
PBX4-202ENST00000557978 SHCBP1Q8NEM2 672 aa19.56■□□□□ 0.72
PBX4-202ENST00000557978 LY9Q9HBG7 655 aa19.56■□□□□ 0.72
PBX4-202ENST00000557978 GPCPD1Q9NPB8 672 aa19.56■□□□□ 0.72
PBX4-202ENST00000557978 SRRDQ9UH36 339 aa19.56■□□□□ 0.72
PBX4-202ENST00000557978 PRR12Q9ULL5 1215 aa19.56■□□□□ 0.72
PBX4-202ENST00000557978 ATP2A1O14983 1001 aa19.55■□□□□ 0.72
PBX4-202ENST00000557978 COPB2P35606 906 aa19.55■□□□□ 0.72
PBX4-202ENST00000557978 C8orf34Q49A92 452 aa19.55■□□□□ 0.72
PBX4-202ENST00000557978 NFXL1Q6ZNB6 911 aa19.55■□□□□ 0.72
PBX4-202ENST00000557978 REPS2Q8NFH8 660 aa19.55■□□□□ 0.72
PBX4-202ENST00000557978 MOV10L1Q9BXT6 1211 aaKnown RBP19.55■□□□□ 0.72
PBX4-202ENST00000557978 MCOLN1Q9GZU1 580 aa19.55■□□□□ 0.72
PBX4-202ENST00000557978 PORCNQ9H237 461 aa19.55■□□□□ 0.72
PBX4-202ENST00000557978 MROH8Q9H579 483 aa19.55■□□□□ 0.72
PBX4-202ENST00000557978 ZNF214Q9UL59 606 aaPredicted RBP19.55■□□□□ 0.72
PBX4-202ENST00000557978 PTPN22Q9Y2R2 807 aa19.55■□□□□ 0.72
PBX4-202ENST00000557978 IVNS1ABPQ9Y6Y0 642 aa19.55■□□□□ 0.72
PBX4-202ENST00000557978 GOLGA8HP0CJ92 632 aa19.54■□□□□ 0.72
PBX4-202ENST00000557978 CASTP20810 708 aaKnown RBP19.54■□□□□ 0.72
PBX4-202ENST00000557978 ANAPC15P60006 121 aa19.54■□□□□ 0.72
PBX4-202ENST00000557978 FGD1P98174 961 aa19.54■□□□□ 0.72
PBX4-202ENST00000557978 SYDE2Q5VT97 1194 aa19.54■□□□□ 0.72
PBX4-202ENST00000557978 WDR78Q5VTH9 848 aa19.54■□□□□ 0.72
PBX4-202ENST00000557978 TTBK2Q6IQ55 1244 aa19.54■□□□□ 0.72
PBX4-202ENST00000557978 PLEKHH3Q7Z736 793 aa19.54■□□□□ 0.72
PBX4-202ENST00000557978 MAP3K14Q99558 947 aa19.54■□□□□ 0.72
PBX4-202ENST00000557978 TEX13BQ9BXU2 312 aa19.54■□□□□ 0.72
PBX4-202ENST00000557978 LRRC2Q9BYS8 371 aa19.54■□□□□ 0.72
PBX4-202ENST00000557978 CENPFP49454 3210 aa19.53■□□□□ 0.72
PBX4-202ENST00000557978 STRNO43815 780 aa19.53■□□□□ 0.72
PBX4-202ENST00000557978 CALM1P0DP23 149 aa19.53■□□□□ 0.72
PBX4-202ENST00000557978 CALM2P0DP24 149 aa19.53■□□□□ 0.72
PBX4-202ENST00000557978 CALM3P0DP25 149 aa19.53■□□□□ 0.72
PBX4-202ENST00000557978 SLC16A2P36021 539 aa19.53■□□□□ 0.72
PBX4-202ENST00000557978 TROAPQ12815 778 aa19.53■□□□□ 0.72
PBX4-202ENST00000557978 COL9A3Q14050 684 aaPredicted RBP19.53■□□□□ 0.72
PBX4-202ENST00000557978 SYNE3Q6ZMZ3 975 aa19.53■□□□□ 0.72
PBX4-202ENST00000557978 GPR142Q7Z601 462 aa19.53■□□□□ 0.72
PBX4-202ENST00000557978 SGMS1Q86VZ5 419 aa19.53■□□□□ 0.72
PBX4-202ENST00000557978 NCAPG2Q86XI2 1143 aa19.53■□□□□ 0.72
PBX4-202ENST00000557978 RIOX2Q8IUF8 465 aa19.53■□□□□ 0.72
PBX4-202ENST00000557978 CPXCR1Q8N123 301 aa19.53■□□□□ 0.72
PBX4-202ENST00000557978 TM6SF1Q9BZW5 370 aa19.53■□□□□ 0.72
PBX4-202ENST00000557978 SENP2Q9HC62 589 aa19.53■□□□□ 0.72
PBX4-202ENST00000557978 SLC12A7Q9Y666 1083 aa19.53■□□□□ 0.72
PBX4-202ENST00000557978 ZNF236Q9UL36 1845 aa19.53■□□□□ 0.72
PBX4-202ENST00000557978 DDAH1O94760 285 aa19.52■□□□□ 0.72
PBX4-202ENST00000557978 SEC24BO95487 1268 aa19.52■□□□□ 0.72
PBX4-202ENST00000557978 ERCC3P19447 782 aa19.52■□□□□ 0.72
PBX4-202ENST00000557978 GRM4Q14833 912 aa19.52■□□□□ 0.72
PBX4-202ENST00000557978 SNRNP48Q6IEG0 339 aaKnown RBP19.52■□□□□ 0.72
PBX4-202ENST00000557978 ZNF654Q8IZM8 581 aa19.52■□□□□ 0.72
PBX4-202ENST00000557978 TNS4Q8IZW8 715 aa19.52■□□□□ 0.72
PBX4-202ENST00000557978 RAET1EQ8TD07 263 aa19.52■□□□□ 0.72
PBX4-202ENST00000557978 NUP133Q8WUM0 1156 aa19.52■□□□□ 0.72
PBX4-202ENST00000557978 SOCS4Q8WXH5 440 aa19.52■□□□□ 0.72
PBX4-202ENST00000557978 NUDT12Q9BQG2 462 aa19.52■□□□□ 0.72
PBX4-202ENST00000557978 PNMA2Q9UL42 364 aa19.52■□□□□ 0.72
PBX4-202ENST00000557978 HTTP42858 3142 aa19.52■□□□□ 0.72
PBX4-202ENST00000557978 KLRF2D3W0D1 207 aa19.51■□□□□ 0.71
PBX4-202ENST00000557978 RPS6KB1P23443 525 aa19.51■□□□□ 0.71
PBX4-202ENST00000557978 KIF5BP33176 963 aa19.51■□□□□ 0.71
PBX4-202ENST00000557978 PRKCZQ05513 592 aa19.51■□□□□ 0.71
PBX4-202ENST00000557978 RUFY3Q7L099 469 aa19.51■□□□□ 0.71
PBX4-202ENST00000557978 CTCFLQ8NI51 663 aaPredicted RBP19.51■□□□□ 0.71
PBX4-202ENST00000557978 TCEANC2Q96MN5 208 aa19.51■□□□□ 0.71
PBX4-202ENST00000557978 RANBP17Q9H2T7 1088 aaKnown RBP19.51■□□□□ 0.71
PBX4-202ENST00000557978 RAVER2Q9HCJ3 691 aaKnown RBP19.51■□□□□ 0.71
PBX4-202ENST00000557978 GPHNQ9NQX3 736 aaPredicted RBP19.51■□□□□ 0.71
PBX4-202ENST00000557978 MAD2L2Q9UI95 211 aa19.51■□□□□ 0.71
PBX4-202ENST00000557978 CYP46A1Q9Y6A2 500 aa19.51■□□□□ 0.71
PBX4-202ENST00000557978 PALM3A6NDB9 673 aaPredicted RBP19.51■□□□□ 0.71
PBX4-202ENST00000557978 FLT3LGP49771 235 aa19.51■□□□□ 0.71
PBX4-202ENST00000557978 IRF5Q13568 498 aa19.51■□□□□ 0.71
PBX4-202ENST00000557978 FBXL16Q8N461 479 aa19.51■□□□□ 0.71
PBX4-202ENST00000557978 UBA5Q9GZZ9 404 aa19.51■□□□□ 0.71
PBX4-202ENST00000557978 ZSWIM6Q9HCJ5 1215 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms