RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 RRAGCQ9HB90 399 aa16.68■□□□□ 0.26
ARHGEF40-208ENST00000557498 BARHL2Q9NY43 387 aa16.68■□□□□ 0.26
ARHGEF40-208ENST00000557498 CLEC11AQ9Y240 323 aa16.68■□□□□ 0.26
ARHGEF40-208ENST00000557498 PNMA6FA0A0J9YX94 578 aa16.67■□□□□ 0.26
ARHGEF40-208ENST00000557498 USP17L10C9JJH3 530 aa16.67■□□□□ 0.26
ARHGEF40-208ENST00000557498 TMEM232C9JQI7 657 aa16.67■□□□□ 0.26
ARHGEF40-208ENST00000557498 POTEIP0CG38 1075 aa16.67■□□□□ 0.26
ARHGEF40-208ENST00000557498 POTEJP0CG39 1038 aa16.67■□□□□ 0.26
ARHGEF40-208ENST00000557498 CALML3P27482 149 aa16.67■□□□□ 0.26
ARHGEF40-208ENST00000557498 IREB2P48200 963 aaKnown RBP16.67■□□□□ 0.26
ARHGEF40-208ENST00000557498 NLRP5P59047 1200 aa16.67■□□□□ 0.26
ARHGEF40-208ENST00000557498 FAM83BQ5T0W9 1011 aa16.67■□□□□ 0.26
ARHGEF40-208ENST00000557498 SYDE2Q5VT97 1194 aa16.67■□□□□ 0.26
ARHGEF40-208ENST00000557498 ATL3Q6DD88 541 aa16.67■□□□□ 0.26
ARHGEF40-208ENST00000557498 TYW1BQ6NUM6 668 aa16.67■□□□□ 0.26
ARHGEF40-208ENST00000557498 LPAR1Q92633 364 aa16.67■□□□□ 0.26
ARHGEF40-208ENST00000557498 ZNF396Q96N95 335 aaPredicted RBP16.67■□□□□ 0.26
ARHGEF40-208ENST00000557498 BRMS1Q9HCU9 246 aa16.67■□□□□ 0.26
ARHGEF40-208ENST00000557498 SNCAIPQ9Y6H5 919 aa16.67■□□□□ 0.26
ARHGEF40-208ENST00000557498 BTBD18B2RXH4 712 aa16.66■□□□□ 0.26
ARHGEF40-208ENST00000557498 FIBPO43427 364 aa16.66■□□□□ 0.26
ARHGEF40-208ENST00000557498 IKQ13123 557 aaPredicted RBP16.66■□□□□ 0.26
ARHGEF40-208ENST00000557498 MTMR2Q13614 643 aa16.66■□□□□ 0.26
ARHGEF40-208ENST00000557498 VGLL4Q14135 290 aa16.66■□□□□ 0.26
ARHGEF40-208ENST00000557498 NPY5RQ15761 445 aa16.66■□□□□ 0.26
ARHGEF40-208ENST00000557498 CSPP1Q1MSJ5 1256 aa16.66■□□□□ 0.26
ARHGEF40-208ENST00000557498 MYSM1Q5VVJ2 828 aa16.66■□□□□ 0.26
ARHGEF40-208ENST00000557498 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.66■□□□□ 0.26
ARHGEF40-208ENST00000557498 NOSTRINQ8IVI9 506 aa16.66■□□□□ 0.26
ARHGEF40-208ENST00000557498 ZNF280CQ8ND82 737 aa16.66■□□□□ 0.26
ARHGEF40-208ENST00000557498 CCDC12Q8WUD4 166 aaPredicted RBP16.66■□□□□ 0.26
ARHGEF40-208ENST00000557498 GDPD2Q9HCC8 539 aa16.66■□□□□ 0.26
ARHGEF40-208ENST00000557498 LMBRD1Q9NUN5 540 aa16.66■□□□□ 0.26
ARHGEF40-208ENST00000557498 CSADQ9Y600 493 aa16.66■□□□□ 0.26
ARHGEF40-208ENST00000557498 ZBTB5O15062 677 aa16.65■□□□□ 0.26
ARHGEF40-208ENST00000557498 WDR46O15213 610 aaKnown RBP16.65■□□□□ 0.26
ARHGEF40-208ENST00000557498 PLA2G6O60733 806 aa16.65■□□□□ 0.26
ARHGEF40-208ENST00000557498 STAT2P52630 851 aa16.65■□□□□ 0.26
ARHGEF40-208ENST00000557498 USP14P54578 494 aa16.65■□□□□ 0.26
ARHGEF40-208ENST00000557498 NAPAP54920 295 aa16.65■□□□□ 0.26
ARHGEF40-208ENST00000557498 SPP2Q13103 211 aa16.65■□□□□ 0.26
ARHGEF40-208ENST00000557498 CDC37Q16543 378 aaPredicted RBP16.65■□□□□ 0.26
ARHGEF40-208ENST00000557498 MAP3K11Q16584 847 aa16.65■□□□□ 0.26
ARHGEF40-208ENST00000557498 QRICH1Q2TAL8 776 aa16.65■□□□□ 0.26
ARHGEF40-208ENST00000557498 MAP1SQ66K74 1059 aaPredicted RBP16.65■□□□□ 0.26
ARHGEF40-208ENST00000557498 GALNT17Q6IS24 598 aa16.65■□□□□ 0.26
ARHGEF40-208ENST00000557498 PPP1R18Q6NYC8 613 aa16.65■□□□□ 0.26
ARHGEF40-208ENST00000557498 FAM160B2Q86V87 743 aa16.65■□□□□ 0.26
ARHGEF40-208ENST00000557498 LDHDQ86WU2 507 aa16.65■□□□□ 0.26
ARHGEF40-208ENST00000557498 DAGLBQ8NCG7 672 aa16.65■□□□□ 0.26
ARHGEF40-208ENST00000557498 OXER1Q8TDS5 423 aa16.65■□□□□ 0.26
ARHGEF40-208ENST00000557498 TFIP11Q9UBB9 837 aaKnown RBP16.65■□□□□ 0.26
ARHGEF40-208ENST00000557498 CFAP45Q9UL16 551 aa16.65■□□□□ 0.26
ARHGEF40-208ENST00000557498 ZHX2Q9Y6X8 837 aa16.65■□□□□ 0.26
ARHGEF40-208ENST00000557498 ESYT2A0FGR8 921 aa16.64■□□□□ 0.25
ARHGEF40-208ENST00000557498 PRPF40AO75400 957 aaKnown RBP16.64■□□□□ 0.25
ARHGEF40-208ENST00000557498 BACE1P56817 501 aa16.64■□□□□ 0.25
ARHGEF40-208ENST00000557498 NR5A1Q13285 461 aa16.64■□□□□ 0.25
ARHGEF40-208ENST00000557498 CHURC1Q8WUH1 139 aa16.64■□□□□ 0.25
ARHGEF40-208ENST00000557498 TNFRSF25Q93038 417 aa16.64■□□□□ 0.25
ARHGEF40-208ENST00000557498 C12orf42Q96LP6 360 aa16.64■□□□□ 0.25
ARHGEF40-208ENST00000557498 USP28Q96RU2 1077 aa16.64■□□□□ 0.25
ARHGEF40-208ENST00000557498 SCAND2PQ9GZW5 306 aaPredicted RBP16.64■□□□□ 0.25
ARHGEF40-208ENST00000557498 EMILIN3Q9NT22 766 aa16.64■□□□□ 0.25
ARHGEF40-208ENST00000557498 FEM1BQ9UK73 627 aa16.64■□□□□ 0.25
ARHGEF40-208ENST00000557498 PRR12Q9ULL5 1215 aa16.64■□□□□ 0.25
ARHGEF40-208ENST00000557498 PCDHA4Q9UN74 947 aa16.64■□□□□ 0.25
ARHGEF40-208ENST00000557498 C19orf81C9J6K1 198 aa16.63■□□□□ 0.25
ARHGEF40-208ENST00000557498 PPP1R11O60927 126 aaPredicted RBP16.63■□□□□ 0.25
ARHGEF40-208ENST00000557498 TTLL12Q14166 644 aaPredicted RBP16.63■□□□□ 0.25
ARHGEF40-208ENST00000557498 ARMC9Q7Z3E5 817 aa16.63■□□□□ 0.25
ARHGEF40-208ENST00000557498 ANKRD13AQ8IZ07 590 aa16.63■□□□□ 0.25
ARHGEF40-208ENST00000557498 BLIDQ8IZY5 108 aa16.63■□□□□ 0.25
ARHGEF40-208ENST00000557498 COA7Q96BR5 231 aa16.63■□□□□ 0.25
ARHGEF40-208ENST00000557498 ZMYND12Q9H0C1 365 aa16.63■□□□□ 0.25
ARHGEF40-208ENST00000557498 NMRK2Q9NPI5 230 aa16.63■□□□□ 0.25
ARHGEF40-208ENST00000557498 AFG3L2Q9Y4W6 797 aa16.63■□□□□ 0.25
ARHGEF40-208ENST00000557498 ELP1O95163 1332 aa16.63■□□□□ 0.25
ARHGEF40-208ENST00000557498 TRIM75PA6NK02 468 aa16.62■□□□□ 0.25
ARHGEF40-208ENST00000557498 VCAM1P19320 739 aa16.62■□□□□ 0.25
ARHGEF40-208ENST00000557498 MOB2Q70IA6 237 aa16.62■□□□□ 0.25
ARHGEF40-208ENST00000557498 LEO1Q8WVC0 666 aaPredicted RBP16.62■□□□□ 0.25
ARHGEF40-208ENST00000557498 SPATA32Q96LK8 384 aa16.62■□□□□ 0.25
ARHGEF40-208ENST00000557498 FTOQ9C0B1 505 aaKnown RBP eCLIP16.62■□□□□ 0.25
ARHGEF40-208ENST00000557498 C6orf50Q9HD87 102 aa16.62■□□□□ 0.25
ARHGEF40-208ENST00000557498 RTEL1Q9NZ71 1219 aa16.62■□□□□ 0.25
ARHGEF40-208ENST00000557498 PTPRFP10586 1907 aa16.62■□□□□ 0.25
ARHGEF40-208ENST00000557498 PARP14Q460N5 1801 aa16.61■□□□□ 0.25
ARHGEF40-208ENST00000557498 SMCO2A6NFE2 343 aa16.61■□□□□ 0.25
ARHGEF40-208ENST00000557498 M0R2N6 131 aa16.61■□□□□ 0.25
ARHGEF40-208ENST00000557498 TRAF5O00463 557 aa16.61■□□□□ 0.25
ARHGEF40-208ENST00000557498 GNA11P29992 359 aa16.61■□□□□ 0.25
ARHGEF40-208ENST00000557498 NASPP49321 788 aaPredicted RBP16.61■□□□□ 0.25
ARHGEF40-208ENST00000557498 DGKZQ13574 1117 aa16.61■□□□□ 0.25
ARHGEF40-208ENST00000557498 KIFC2Q96AC6 838 aa16.61■□□□□ 0.25
ARHGEF40-208ENST00000557498 AMNQ9BXJ7 453 aa16.61■□□□□ 0.25
ARHGEF40-208ENST00000557498 RANBP17Q9H2T7 1088 aaKnown RBP16.61■□□□□ 0.25
ARHGEF40-208ENST00000557498 RPAP3Q9H6T3 665 aaPredicted RBP16.61■□□□□ 0.25
ARHGEF40-208ENST00000557498 ELP3Q9H9T3 547 aa16.61■□□□□ 0.25
ARHGEF40-208ENST00000557498 POLR3EQ9NVU0 708 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms