RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 TMEM132BQ14DG7 1078 aa12.4□□□□□ -0.42
HNRNPC-232ENST00000557442 WTAPQ15007 396 aa12.4□□□□□ -0.42
HNRNPC-232ENST00000557442 SEC23AQ15436 765 aa12.4□□□□□ -0.42
HNRNPC-232ENST00000557442 TMEM67Q5HYA8 995 aa12.4□□□□□ -0.42
HNRNPC-232ENST00000557442 FAM160B2Q86V87 743 aa12.4□□□□□ -0.42
HNRNPC-232ENST00000557442 RASEFQ8IZ41 740 aa12.4□□□□□ -0.42
HNRNPC-232ENST00000557442 CHURC1Q8WUH1 139 aa12.4□□□□□ -0.42
HNRNPC-232ENST00000557442 ANKS1AQ92625 1134 aa12.4□□□□□ -0.42
HNRNPC-232ENST00000557442 MOV10L1Q9BXT6 1211 aaKnown RBP12.4□□□□□ -0.42
HNRNPC-232ENST00000557442 SPATC1LQ9H0A9 340 aa12.4□□□□□ -0.42
HNRNPC-232ENST00000557442 SRRDQ9UH36 339 aa12.4□□□□□ -0.42
HNRNPC-232ENST00000557442 ADAMTS5Q9UNA0 930 aa12.4□□□□□ -0.42
HNRNPC-232ENST00000557442 CTDP1Q9Y5B0 961 aaPredicted RBP12.4□□□□□ -0.42
HNRNPC-232ENST00000557442 PTCH2Q9Y6C5 1203 aa12.4□□□□□ -0.42
HNRNPC-232ENST00000557442 ZNF543Q08ER8 600 aa12.39□□□□□ -0.43
HNRNPC-232ENST00000557442 GPR142Q7Z601 462 aa12.39□□□□□ -0.43
HNRNPC-232ENST00000557442 RAET1EQ8TD07 263 aa12.39□□□□□ -0.43
HNRNPC-232ENST00000557442 ABHD8Q96I13 439 aa12.39□□□□□ -0.43
HNRNPC-232ENST00000557442 GPCPD1Q9NPB8 672 aa12.39□□□□□ -0.43
HNRNPC-232ENST00000557442 ZNF214Q9UL59 606 aaPredicted RBP12.39□□□□□ -0.43
HNRNPC-232ENST00000557442 GABRQQ9UN88 632 aa12.39□□□□□ -0.43
HNRNPC-232ENST00000557442 HPS5Q9UPZ3 1129 aa12.39□□□□□ -0.43
HNRNPC-232ENST00000557442 GTF3C3Q9Y5Q9 886 aa12.39□□□□□ -0.43
HNRNPC-232ENST00000557442 IVNS1ABPQ9Y6Y0 642 aa12.39□□□□□ -0.43
HNRNPC-232ENST00000557442 EPB41L2O43491 1005 aaKnown RBP12.38□□□□□ -0.43
HNRNPC-232ENST00000557442 PLA2G6O60733 806 aa12.38□□□□□ -0.43
HNRNPC-232ENST00000557442 ZBED4O75132 1171 aa12.38□□□□□ -0.43
HNRNPC-232ENST00000557442 GOLGA8HP0CJ92 632 aa12.38□□□□□ -0.43
HNRNPC-232ENST00000557442 SNHG28P0DPA3 235 aa12.38□□□□□ -0.43
HNRNPC-232ENST00000557442 SLC16A2P36021 539 aa12.38□□□□□ -0.43
HNRNPC-232ENST00000557442 FLT3LGP49771 235 aa12.38□□□□□ -0.43
HNRNPC-232ENST00000557442 COL9A3Q14050 684 aaPredicted RBP12.38□□□□□ -0.43
HNRNPC-232ENST00000557442 ADCK5Q3MIX3 580 aa12.38□□□□□ -0.43
HNRNPC-232ENST00000557442 TSGA10IPQ3SY00 556 aa12.38□□□□□ -0.43
HNRNPC-232ENST00000557442 GPATCH4Q5T3I0 446 aaKnown RBP12.38□□□□□ -0.43
HNRNPC-232ENST00000557442 SNRNP48Q6IEG0 339 aaKnown RBP12.38□□□□□ -0.43
HNRNPC-232ENST00000557442 TTBK2Q6IQ55 1244 aa12.38□□□□□ -0.43
HNRNPC-232ENST00000557442 PLEKHH3Q7Z736 793 aa12.38□□□□□ -0.43
HNRNPC-232ENST00000557442 NCAPG2Q86XI2 1143 aa12.38□□□□□ -0.43
HNRNPC-232ENST00000557442 CPXCR1Q8N123 301 aa12.38□□□□□ -0.43
HNRNPC-232ENST00000557442 REPS2Q8NFH8 660 aa12.38□□□□□ -0.43
HNRNPC-232ENST00000557442 SOCS4Q8WXH5 440 aa12.38□□□□□ -0.43
HNRNPC-232ENST00000557442 NEK1Q96PY6 1258 aa12.38□□□□□ -0.43
HNRNPC-232ENST00000557442 TEX13BQ9BXU2 312 aa12.38□□□□□ -0.43
HNRNPC-232ENST00000557442 SLC38A10Q9HBR0 1119 aa12.38□□□□□ -0.43
HNRNPC-232ENST00000557442 SENP2Q9HC62 589 aa12.38□□□□□ -0.43
HNRNPC-232ENST00000557442 PRR12Q9ULL5 1215 aa12.38□□□□□ -0.43
HNRNPC-232ENST00000557442 BRCA2P51587 3418 aa12.38□□□□□ -0.43
HNRNPC-232ENST00000557442 PARP1P09874 1014 aaKnown RBP12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 FDX1P10109 184 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 ERCC3P19447 782 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 STAT3P40763 770 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 SLC4A3P48751 1232 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 SLC9C1Q4G0N8 1177 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 ASPRV1Q53RT3 343 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 SYDE2Q5VT97 1194 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 SHCBP1Q8NEM2 672 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 IGDCC4Q8TDY8 1250 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 TMEM87BQ96K49 555 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 TCEANC2Q96MN5 208 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 JAKMIP1Q96N16 626 aaKnown RBP12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 NUDT12Q9BQG2 462 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 MTA3Q9BTC8 594 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 USP26Q9BXU7 913 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 LRRC2Q9BYS8 371 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 MROH8Q9H579 483 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 LY9Q9HBG7 655 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 RAVER2Q9HCJ3 691 aaKnown RBP12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 GPHNQ9NQX3 736 aaPredicted RBP12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 SNX14Q9Y5W7 946 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 LRRC37A2A6NM11 1700 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 SH2B2O14492 632 aaPredicted RBP12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 SLC25A27O95847 323 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 COPB2P35606 906 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 OAZ1P54368 228 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 SNAP25P60880 206 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 CCDC174Q6PII3 467 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 BTNL9Q6UXG8 535 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 NFXL1Q6ZNB6 911 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 CATIPQ7Z7H3 387 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 RIOX2Q8IUF8 465 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 KCNB2Q92953 911 aa12.37□□□□□ -0.43
HNRNPC-232ENST00000557442 WDR19Q8NEZ3 1342 aa12.36□□□□□ -0.43
HNRNPC-232ENST00000557442 CCDC69A6NI79 296 aa12.36□□□□□ -0.43
HNRNPC-232ENST00000557442 ATP2A1O14983 1001 aa12.36□□□□□ -0.43
HNRNPC-232ENST00000557442 DHX16O60231 1041 aaKnown RBP12.36□□□□□ -0.43
HNRNPC-232ENST00000557442 ADCY3O60266 1144 aa12.36□□□□□ -0.43
HNRNPC-232ENST00000557442 EIF5BO60841 1220 aaKnown RBP12.36□□□□□ -0.43
HNRNPC-232ENST00000557442 HMGB1P09429 215 aaKnown RBP12.36□□□□□ -0.43
HNRNPC-232ENST00000557442 CYP2B6P20813 491 aa12.36□□□□□ -0.43
HNRNPC-232ENST00000557442 PTPREP23469 700 aa12.36□□□□□ -0.43
HNRNPC-232ENST00000557442 GRK4P32298 578 aa12.36□□□□□ -0.43
HNRNPC-232ENST00000557442 RGS2P41220 211 aa12.36□□□□□ -0.43
HNRNPC-232ENST00000557442 IRF5Q13568 498 aa12.36□□□□□ -0.43
HNRNPC-232ENST00000557442 GRB14Q14449 540 aa12.36□□□□□ -0.43
HNRNPC-232ENST00000557442 GRM4Q14833 912 aa12.36□□□□□ -0.43
HNRNPC-232ENST00000557442 BLOC1S2Q6QNY1 142 aa12.36□□□□□ -0.43
HNRNPC-232ENST00000557442 DHX32Q7L7V1 743 aaKnown RBP12.36□□□□□ -0.43
HNRNPC-232ENST00000557442 ZNF654Q8IZM8 581 aa12.36□□□□□ -0.43
HNRNPC-232ENST00000557442 SLAIN1Q8ND83 568 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms