RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 GFOD1Q9NXC2 390 aa7.37□□□□□ -1.23
VRK1-207ENST00000557352 FBXL21Q9UKT6 434 aa7.37□□□□□ -1.23
VRK1-207ENST00000557352 PCDHB12Q9Y5F1 795 aa7.37□□□□□ -1.23
VRK1-207ENST00000557352 MYOCOSA0A1B0GUC4 107 aa7.36□□□□□ -1.23
VRK1-207ENST00000557352 FAM86C2PA6NEL3 165 aa7.36□□□□□ -1.23
VRK1-207ENST00000557352 TCAF2A6NFQ2 919 aa7.36□□□□□ -1.23
VRK1-207ENST00000557352 MEIS1O00470 390 aa7.36□□□□□ -1.23
VRK1-207ENST00000557352 NRDCO43847 1150 aa7.36□□□□□ -1.23
VRK1-207ENST00000557352 IMPDH2P12268 514 aa7.36□□□□□ -1.23
VRK1-207ENST00000557352 AUHQ13825 339 aaKnown RBP7.36□□□□□ -1.23
VRK1-207ENST00000557352 KCNA10Q16322 511 aa7.36□□□□□ -1.23
VRK1-207ENST00000557352 CEP128Q6ZU80 1094 aa7.36□□□□□ -1.23
VRK1-207ENST00000557352 AMIGO3Q86WK7 504 aa7.36□□□□□ -1.23
VRK1-207ENST00000557352 SIRT2Q8IXJ6 389 aa7.36□□□□□ -1.23
VRK1-207ENST00000557352 RNF34Q969K3 372 aa7.36□□□□□ -1.23
VRK1-207ENST00000557352 SUCOQ9UBS9 1254 aaKnown RBP7.36□□□□□ -1.23
VRK1-207ENST00000557352 SMG5Q9UPR3 1016 aaKnown RBP7.36□□□□□ -1.23
VRK1-207ENST00000557352 PEX10O60683 326 aa7.35□□□□□ -1.23
VRK1-207ENST00000557352 CTSKP43235 329 aa7.35□□□□□ -1.23
VRK1-207ENST00000557352 RACK1P63244 317 aaKnown RBP7.35□□□□□ -1.23
VRK1-207ENST00000557352 SLC14A2Q15849 920 aa7.35□□□□□ -1.23
VRK1-207ENST00000557352 DHRS1Q96LJ7 313 aa7.35□□□□□ -1.23
VRK1-207ENST00000557352 C9IYK1 514 aa7.34□□□□□ -1.23
VRK1-207ENST00000557352 BMP8BP34820 402 aa7.34□□□□□ -1.23
VRK1-207ENST00000557352 TAB3Q8N5C8 712 aaPredicted RBP7.34□□□□□ -1.23
VRK1-207ENST00000557352 FCRL2Q96LA5 508 aaPredicted RBP7.34□□□□□ -1.23
VRK1-207ENST00000557352 FERD3LQ96RJ6 166 aa7.34□□□□□ -1.23
VRK1-207ENST00000557352 PRR13Q9NZ81 148 aa7.34□□□□□ -1.23
VRK1-207ENST00000557352 DDX41Q9UJV9 622 aaKnown RBP7.34□□□□□ -1.23
VRK1-207ENST00000557352 SHOXO15266 292 aa7.33□□□□□ -1.24
VRK1-207ENST00000557352 RECKO95980 971 aa7.33□□□□□ -1.24
VRK1-207ENST00000557352 DLG4P78352 724 aa7.33□□□□□ -1.24
VRK1-207ENST00000557352 CCDC144CPQ8IYA2 1237 aa7.33□□□□□ -1.24
VRK1-207ENST00000557352 C7orf61Q8IZ16 206 aa7.33□□□□□ -1.24
VRK1-207ENST00000557352 TM9SF2Q99805 663 aa7.33□□□□□ -1.24
VRK1-207ENST00000557352 PLCD4Q9BRC7 762 aa7.33□□□□□ -1.24
VRK1-207ENST00000557352 CRTAC1Q9NQ79 661 aa7.33□□□□□ -1.24
VRK1-207ENST00000557352 TNFRSF10DQ9UBN6 386 aa7.33□□□□□ -1.24
VRK1-207ENST00000557352 PPT2Q9UMR5 302 aa7.33□□□□□ -1.24
VRK1-207ENST00000557352 TEX51A0A1B0GUA7 166 aa7.32□□□□□ -1.24
VRK1-207ENST00000557352 OR14I1A6ND48 311 aa7.32□□□□□ -1.24
VRK1-207ENST00000557352 FADS2P1A8MWK0 482 aa7.32□□□□□ -1.24
VRK1-207ENST00000557352 SEMA7AO75326 666 aa7.32□□□□□ -1.24
VRK1-207ENST00000557352 ZNF205O95201 554 aa7.32□□□□□ -1.24
VRK1-207ENST00000557352 VAV1P15498 845 aa7.32□□□□□ -1.24
VRK1-207ENST00000557352 VAMP1P23763 118 aa7.32□□□□□ -1.24
VRK1-207ENST00000557352 PMS1P54277 932 aaKnown RBP7.32□□□□□ -1.24
VRK1-207ENST00000557352 RTP1P59025 263 aa7.32□□□□□ -1.24
VRK1-207ENST00000557352 LINC00310P59036 64 aa7.32□□□□□ -1.24
VRK1-207ENST00000557352 ADGRF1Q5T601 910 aa7.32□□□□□ -1.24
VRK1-207ENST00000557352 FBXW10Q5XX13 1052 aa7.32□□□□□ -1.24
VRK1-207ENST00000557352 TMEM132EQ6IEE7 984 aa7.32□□□□□ -1.24
VRK1-207ENST00000557352 CRTC3Q6UUV7 619 aa7.32□□□□□ -1.24
VRK1-207ENST00000557352 RBBP8NLQ8NC74 664 aaPredicted RBP7.32□□□□□ -1.24
VRK1-207ENST00000557352 ERVK13-1Q9NX77 482 aa7.32□□□□□ -1.24
VRK1-207ENST00000557352 SCAMP3O14828 347 aaKnown RBP7.31□□□□□ -1.24
VRK1-207ENST00000557352 PNLIPP16233 465 aa7.31□□□□□ -1.24
VRK1-207ENST00000557352 ZYXQ15942 572 aaKnown RBP7.31□□□□□ -1.24
VRK1-207ENST00000557352 TDRD10Q5VZ19 366 aaKnown RBP7.31□□□□□ -1.24
VRK1-207ENST00000557352 CIAPIN1Q6FI81 312 aa7.31□□□□□ -1.24
VRK1-207ENST00000557352 RUFY4Q6ZNE9 571 aa7.31□□□□□ -1.24
VRK1-207ENST00000557352 PPFIBP1Q86W92 1011 aa7.31□□□□□ -1.24
VRK1-207ENST00000557352 CDADC1Q9BWV3 514 aa7.31□□□□□ -1.24
VRK1-207ENST00000557352 SGPP1Q9BX95 441 aa7.31□□□□□ -1.24
VRK1-207ENST00000557352 GCM1Q9NP62 436 aa7.31□□□□□ -1.24
VRK1-207ENST00000557352 GPR55Q9Y2T6 319 aaPredicted RBP7.31□□□□□ -1.24
VRK1-207ENST00000557352 GSNP06396 782 aa7.3□□□□□ -1.24
VRK1-207ENST00000557352 ENDOUP21128 410 aaKnown RBP7.3□□□□□ -1.24
VRK1-207ENST00000557352 GUCY2CP25092 1073 aa7.3□□□□□ -1.24
VRK1-207ENST00000557352 CEBPAP49715 358 aaPredicted RBP7.3□□□□□ -1.24
VRK1-207ENST00000557352 KIR3DS1Q14943 382 aa7.3□□□□□ -1.24
VRK1-207ENST00000557352 HSF5Q4G112 596 aaPredicted RBP7.3□□□□□ -1.24
VRK1-207ENST00000557352 ANKRD39Q53RE8 183 aa7.3□□□□□ -1.24
VRK1-207ENST00000557352 UNC5AQ6ZN44 842 aa7.3□□□□□ -1.24
VRK1-207ENST00000557352 TTLL10Q6ZVT0 673 aa7.3□□□□□ -1.24
VRK1-207ENST00000557352 SMARCC1Q92922 1105 aaPredicted RBP7.3□□□□□ -1.24
VRK1-207ENST00000557352 DSCC1Q9BVC3 393 aa7.3□□□□□ -1.24
VRK1-207ENST00000557352 AP5S1Q9NUS5 200 aa7.3□□□□□ -1.24
VRK1-207ENST00000557352 NUAK1O60285 661 aa7.29□□□□□ -1.24
VRK1-207ENST00000557352 SDHBP21912 280 aa7.29□□□□□ -1.24
VRK1-207ENST00000557352 PAK2Q13177 524 aa7.29□□□□□ -1.24
VRK1-207ENST00000557352 RTP2Q5QGT7 225 aa7.29□□□□□ -1.24
VRK1-207ENST00000557352 AXDND1Q5T1B0 1012 aaPredicted RBP7.29□□□□□ -1.24
VRK1-207ENST00000557352 DCAF15Q66K64 600 aa7.29□□□□□ -1.24
VRK1-207ENST00000557352 GALNT18Q6P9A2 607 aa7.29□□□□□ -1.24
VRK1-207ENST00000557352 LILRA6Q6PI73 481 aa7.29□□□□□ -1.24
VRK1-207ENST00000557352 SLCO6A1Q86UG4 719 aa7.29□□□□□ -1.24
VRK1-207ENST00000557352 METTL16Q86W50 562 aaKnown RBP7.29□□□□□ -1.24
VRK1-207ENST00000557352 LSRQ86X29 649 aaPredicted RBP7.29□□□□□ -1.24
VRK1-207ENST00000557352 ZNF654Q8IZM8 581 aa7.29□□□□□ -1.24
VRK1-207ENST00000557352 TMEM52Q8NDY8 209 aa7.29□□□□□ -1.24
VRK1-207ENST00000557352 WTIPA6NIX2 430 aaPredicted RBP7.28□□□□□ -1.24
VRK1-207ENST00000557352 HRKO00198 91 aa7.28□□□□□ -1.24
VRK1-207ENST00000557352 TP53P04637 393 aaPredicted RBP7.28□□□□□ -1.24
VRK1-207ENST00000557352 ZNF445P59923 1031 aa7.28□□□□□ -1.24
VRK1-207ENST00000557352 SRSF3P84103 164 aaKnown RBP7.28□□□□□ -1.24
VRK1-207ENST00000557352 CCDC81Q6ZN84 652 aa7.28□□□□□ -1.24
VRK1-207ENST00000557352 KRTAP4-2Q9BYR5 136 aa7.28□□□□□ -1.24
VRK1-207ENST00000557352 GINM1Q9NU53 330 aa7.28□□□□□ -1.24
VRK1-207ENST00000557352 TAF6LQ9Y6J9 622 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms