RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 MFAP3LO75121 409 aa25.55■■□□□ 1.68
RCCD1-208ENST00000557266 TADA3O75528 432 aa25.55■■□□□ 1.68
RCCD1-208ENST00000557266 RPN1P04843 607 aaKnown RBP25.55■■□□□ 1.68
RCCD1-208ENST00000557266 RFC4P35249 363 aa25.55■■□□□ 1.68
RCCD1-208ENST00000557266 DMTNQ08495 405 aa25.55■■□□□ 1.68
RCCD1-208ENST00000557266 KARSQ15046 597 aaKnown RBP25.55■■□□□ 1.68
RCCD1-208ENST00000557266 FILIP1LQ4L180 1135 aa25.55■■□□□ 1.68
RCCD1-208ENST00000557266 ARHGAP29Q52LW3 1261 aa25.55■■□□□ 1.68
RCCD1-208ENST00000557266 ZNF804AQ7Z570 1209 aa25.55■■□□□ 1.68
RCCD1-208ENST00000557266 DAGLBQ8NCG7 672 aa25.55■■□□□ 1.68
RCCD1-208ENST00000557266 MRPL44Q9H9J2 332 aaKnown RBP25.55■■□□□ 1.68
RCCD1-208ENST00000557266 RASA1P20936 1047 aa25.55■■□□□ 1.68
RCCD1-208ENST00000557266 CASQ1P31415 396 aa25.55■■□□□ 1.68
RCCD1-208ENST00000557266 KRT31Q15323 416 aa25.55■■□□□ 1.68
RCCD1-208ENST00000557266 ZNF658Q5TYW1 1059 aaPredicted RBP25.55■■□□□ 1.68
RCCD1-208ENST00000557266 RAD9BQ6WBX8 426 aa25.55■■□□□ 1.68
RCCD1-208ENST00000557266 MAPKAPK5Q8IW41 473 aa25.55■■□□□ 1.68
RCCD1-208ENST00000557266 AMOTL1Q8IY63 956 aa25.55■■□□□ 1.68
RCCD1-208ENST00000557266 CPLX3Q8WVH0 158 aa25.55■■□□□ 1.68
RCCD1-208ENST00000557266 KIFC2Q96AC6 838 aa25.55■■□□□ 1.68
RCCD1-208ENST00000557266 TMEM47Q9BQJ4 181 aa25.55■■□□□ 1.68
RCCD1-208ENST00000557266 RTFDC1Q9BY42 306 aaPredicted RBP25.55■■□□□ 1.68
RCCD1-208ENST00000557266 LIMA1Q9UHB6 759 aaKnown RBP25.55■■□□□ 1.68
RCCD1-208ENST00000557266 SAP30BPQ9UHR5 308 aaKnown RBP25.55■■□□□ 1.68
RCCD1-208ENST00000557266 CCDC194A0A1B0GVG4 234 aa25.54■■□□□ 1.68
RCCD1-208ENST00000557266 STXBP3O00186 592 aa25.54■■□□□ 1.68
RCCD1-208ENST00000557266 TXLNAP40222 546 aa25.54■■□□□ 1.68
RCCD1-208ENST00000557266 CCT6AP40227 531 aaKnown RBP25.54■■□□□ 1.68
RCCD1-208ENST00000557266 PAK1Q13153 545 aa25.54■■□□□ 1.68
RCCD1-208ENST00000557266 HEATR3Q7Z4Q2 680 aa25.54■■□□□ 1.68
RCCD1-208ENST00000557266 ZNF444Q8N0Y2 327 aaPredicted RBP25.54■■□□□ 1.68
RCCD1-208ENST00000557266 CNBD1Q8NA66 436 aa25.54■■□□□ 1.68
RCCD1-208ENST00000557266 CARD6Q9BX69 1037 aa25.54■■□□□ 1.68
RCCD1-208ENST00000557266 NAA15Q9BXJ9 866 aaKnown RBP25.54■■□□□ 1.68
RCCD1-208ENST00000557266 DISC1Q9NRI5 854 aa25.54■■□□□ 1.68
RCCD1-208ENST00000557266 FAM53CQ9NYF3 392 aa25.54■■□□□ 1.68
RCCD1-208ENST00000557266 ITIH6Q6UXX5 1313 aa25.54■■□□□ 1.68
RCCD1-208ENST00000557266 PALM3A6NDB9 673 aaPredicted RBP25.54■■□□□ 1.68
RCCD1-208ENST00000557266 LRRC10BA6NIK2 292 aa25.54■■□□□ 1.68
RCCD1-208ENST00000557266 GYPCP04921 128 aa25.54■■□□□ 1.68
RCCD1-208ENST00000557266 STAT6P42226 847 aa25.54■■□□□ 1.68
RCCD1-208ENST00000557266 MNS1Q8NEH6 495 aa25.54■■□□□ 1.68
RCCD1-208ENST00000557266 TMEM60Q9H2L4 133 aa25.54■■□□□ 1.68
RCCD1-208ENST00000557266 LRRC4BQ9NT99 713 aa25.54■■□□□ 1.68
RCCD1-208ENST00000557266 RMND1Q9NWS8 449 aa25.54■■□□□ 1.68
RCCD1-208ENST00000557266 BARHL2Q9NY43 387 aa25.54■■□□□ 1.68
RCCD1-208ENST00000557266 MTMR7Q9Y216 660 aa25.54■■□□□ 1.68
RCCD1-208ENST00000557266 NAV1Q8NEY1 1877 aa25.53■■□□□ 1.68
RCCD1-208ENST00000557266 NAALADL2Q58DX5 795 aa25.53■■□□□ 1.68
RCCD1-208ENST00000557266 TRAPPC3LQ5T215 181 aa25.53■■□□□ 1.68
RCCD1-208ENST00000557266 C15orf52Q6ZUT6 534 aaKnown RBP25.53■■□□□ 1.68
RCCD1-208ENST00000557266 CCDC148Q8NFR7 591 aa25.53■■□□□ 1.68
RCCD1-208ENST00000557266 NELFBQ8WX92 580 aa25.53■■□□□ 1.68
RCCD1-208ENST00000557266 STX8Q9UNK0 236 aa25.53■■□□□ 1.68
RCCD1-208ENST00000557266 GDAQ9Y2T3 454 aa25.53■■□□□ 1.68
RCCD1-208ENST00000557266 CCDC175P0C221 793 aa25.52■■□□□ 1.68
RCCD1-208ENST00000557266 CASP14P31944 242 aa25.52■■□□□ 1.68
RCCD1-208ENST00000557266 MAP3K9P80192 1104 aa25.52■■□□□ 1.68
RCCD1-208ENST00000557266 INF2Q27J81 1249 aa25.52■■□□□ 1.68
RCCD1-208ENST00000557266 SLC27A3Q5K4L6 730 aa25.52■■□□□ 1.68
RCCD1-208ENST00000557266 POTEAQ6S8J7 498 aa25.52■■□□□ 1.68
RCCD1-208ENST00000557266 UBXN4Q92575 508 aa25.52■■□□□ 1.68
RCCD1-208ENST00000557266 ADGRG1Q9Y653 693 aa25.52■■□□□ 1.68
RCCD1-208ENST00000557266 PP2D1A8MPX8 630 aa25.52■■□□□ 1.68
RCCD1-208ENST00000557266 FXR1P51114 621 aaKnown RBP eCLIP25.52■■□□□ 1.68
RCCD1-208ENST00000557266 GALNT17Q6IS24 598 aa25.52■■□□□ 1.68
RCCD1-208ENST00000557266 DTHD1Q6ZMT9 781 aa25.52■■□□□ 1.68
RCCD1-208ENST00000557266 RASGRP2Q7LDG7 609 aa25.52■■□□□ 1.68
RCCD1-208ENST00000557266 PRDM4Q9UKN5 801 aa25.52■■□□□ 1.68
RCCD1-208ENST00000557266 EFCAB8A8MWE9 144 aa25.51■■□□□ 1.67
RCCD1-208ENST00000557266 LDHCP07864 332 aa25.51■■□□□ 1.67
RCCD1-208ENST00000557266 GPSM2P81274 684 aa25.51■■□□□ 1.67
RCCD1-208ENST00000557266 UTP14CQ5TAP6 766 aaKnown RBP25.51■■□□□ 1.67
RCCD1-208ENST00000557266 SNED1Q8TER0 1413 aa25.51■■□□□ 1.67
RCCD1-208ENST00000557266 PRCPP42785 496 aa25.51■■□□□ 1.67
RCCD1-208ENST00000557266 CLCN6P51797 869 aa25.51■■□□□ 1.67
RCCD1-208ENST00000557266 MRFAP1Q9Y605 127 aa25.51■■□□□ 1.67
RCCD1-208ENST00000557266 UBR3Q6ZT12 1888 aa25.5■■□□□ 1.67
RCCD1-208ENST00000557266 N4BP3O15049 544 aa25.5■■□□□ 1.67
RCCD1-208ENST00000557266 GOLGA8HP0CJ92 632 aa25.5■■□□□ 1.67
RCCD1-208ENST00000557266 FECHP22830 423 aa25.5■■□□□ 1.67
RCCD1-208ENST00000557266 BTDP43251 543 aa25.5■■□□□ 1.67
RCCD1-208ENST00000557266 COPB1P53618 953 aaKnown RBP25.5■■□□□ 1.67
RCCD1-208ENST00000557266 TCP11X2Q5H9J9 407 aa25.5■■□□□ 1.67
RCCD1-208ENST00000557266 CNGA4Q8IV77 575 aa25.5■■□□□ 1.67
RCCD1-208ENST00000557266 KRT222Q8N1A0 295 aa25.5■■□□□ 1.67
RCCD1-208ENST00000557266 MAPK8IP1Q9UQF2 711 aa25.5■■□□□ 1.67
RCCD1-208ENST00000557266 SPAG1Q07617 926 aa25.49■■□□□ 1.67
RCCD1-208ENST00000557266 GTPBP4Q9BZE4 634 aaKnown RBP25.49■■□□□ 1.67
RCCD1-208ENST00000557266 TAB2Q9NYJ8 693 aa25.49■■□□□ 1.67
RCCD1-208ENST00000557266 A0A0U1RQJ8 604 aa25.49■■□□□ 1.67
RCCD1-208ENST00000557266 KCNJ18B7U540 433 aa25.49■■□□□ 1.67
RCCD1-208ENST00000557266 KCNJ12Q14500 433 aa25.49■■□□□ 1.67
RCCD1-208ENST00000557266 PRR5LQ6MZQ0 368 aa25.49■■□□□ 1.67
RCCD1-208ENST00000557266 ATRIPQ8WXE1 791 aa25.49■■□□□ 1.67
RCCD1-208ENST00000557266 CCDC51Q96ER9 411 aa25.49■■□□□ 1.67
RCCD1-208ENST00000557266 IRX2Q9BZI1 471 aaPredicted RBP25.49■■□□□ 1.67
RCCD1-208ENST00000557266 VPS16Q9H269 839 aa25.49■■□□□ 1.67
RCCD1-208ENST00000557266 CPVLQ9H3G5 476 aa25.49■■□□□ 1.67
RCCD1-208ENST00000557266 CD209Q9NNX6 404 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms