RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 TM4SF5O14894 197 aa6.02□□□□□ -1.45
ATXN3-238ENST00000556288 NPHP1O15259 732 aa6.02□□□□□ -1.45
ATXN3-238ENST00000556288 ADAM11O75078 769 aa6.02□□□□□ -1.45
ATXN3-238ENST00000556288 RPS6KA4O75676 772 aa6.02□□□□□ -1.45
ATXN3-238ENST00000556288 B3GALT4O96024 378 aa6.02□□□□□ -1.45
ATXN3-238ENST00000556288 DUOXA2Q1HG44 320 aa6.02□□□□□ -1.45
ATXN3-238ENST00000556288 PNISRQ8TF01 805 aaKnown RBP6.02□□□□□ -1.45
ATXN3-238ENST00000556288 FAM161BQ96MY7 647 aa6.02□□□□□ -1.45
ATXN3-238ENST00000556288 TEX13AQ9BXU3 409 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-238ENST00000556288 MTFR1LQ9H019 292 aa6.02□□□□□ -1.45
ATXN3-238ENST00000556288 SOX17Q9H6I2 414 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-238ENST00000556288 USP16Q9Y5T5 823 aa6.02□□□□□ -1.45
ATXN3-238ENST00000556288 AK5Q9Y6K8 562 aa6.02□□□□□ -1.45
ATXN3-238ENST00000556288 KDM3BQ7LBC6 1761 aa6.02□□□□□ -1.45
ATXN3-238ENST00000556288 PAPPAQ13219 1627 aa6.01□□□□□ -1.45
ATXN3-238ENST00000556288 SCO2A0A1W2PP80 73 aa6.01□□□□□ -1.45
ATXN3-238ENST00000556288 PRAMEF22A3QJZ6 481 aa6.01□□□□□ -1.45
ATXN3-238ENST00000556288 ELL2O00472 640 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-238ENST00000556288 EIF4EBP3O60516 100 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-238ENST00000556288 WISP1O95388 367 aa6.01□□□□□ -1.45
ATXN3-238ENST00000556288 SNRPA1P09661 255 aaKnown RBP6.01□□□□□ -1.45
ATXN3-238ENST00000556288 USP17L7P0C7H9 530 aa6.01□□□□□ -1.45
ATXN3-238ENST00000556288 CYP19A1P11511 503 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-238ENST00000556288 MYL6BP14649 208 aa6.01□□□□□ -1.45
ATXN3-238ENST00000556288 DAB2P98082 770 aa6.01□□□□□ -1.45
ATXN3-238ENST00000556288 FAAP100Q0VG06 881 aa6.01□□□□□ -1.45
ATXN3-238ENST00000556288 ADGRE1Q14246 886 aa6.01□□□□□ -1.45
ATXN3-238ENST00000556288 INTS5Q6P9B9 1019 aaKnown RBP6.01□□□□□ -1.45
ATXN3-238ENST00000556288 C3orf58Q8NDZ4 430 aa6.01□□□□□ -1.45
ATXN3-238ENST00000556288 UBASH3BQ8TF42 649 aa6.01□□□□□ -1.45
ATXN3-238ENST00000556288 FOXD4L4Q8WXT5 416 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-238ENST00000556288 USP26Q9BXU7 913 aa6.01□□□□□ -1.45
ATXN3-238ENST00000556288 FAM8A1Q9UBU6 413 aa6.01□□□□□ -1.45
ATXN3-238ENST00000556288 SRP68Q9UHB9 627 aaKnown RBP6.01□□□□□ -1.45
ATXN3-238ENST00000556288 GPN3Q9UHW5 284 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-238ENST00000556288 C4AP0C0L4 1744 aa6.01□□□□□ -1.45
ATXN3-238ENST00000556288 ZNF831Q5JPB2 1677 aa6.01□□□□□ -1.45
ATXN3-238ENST00000556288 ADAMTS7Q9UKP4 1686 aa6.01□□□□□ -1.45
ATXN3-238ENST00000556288 A0A087WZG4 1122 aa6□□□□□ -1.45
ATXN3-238ENST00000556288 ALX3O95076 343 aa6□□□□□ -1.45
ATXN3-238ENST00000556288 GATA4P43694 442 aa6□□□□□ -1.45
ATXN3-238ENST00000556288 IREB2P48200 963 aaKnown RBP6□□□□□ -1.45
ATXN3-238ENST00000556288 PPP2R3AQ06190 1150 aa6□□□□□ -1.45
ATXN3-238ENST00000556288 AIMP1Q12904 312 aaKnown RBP6□□□□□ -1.45
ATXN3-238ENST00000556288 DOC2BQ14184 412 aa6□□□□□ -1.45
ATXN3-238ENST00000556288 MBTPS1Q14703 1052 aa6□□□□□ -1.45
ATXN3-238ENST00000556288 ACAD11Q709F0 780 aa6□□□□□ -1.45
ATXN3-238ENST00000556288 TMC4Q7Z404 712 aa6□□□□□ -1.45
ATXN3-238ENST00000556288 AMIGO3Q86WK7 504 aa6□□□□□ -1.45
ATXN3-238ENST00000556288 TMEM130Q8N3G9 435 aa6□□□□□ -1.45
ATXN3-238ENST00000556288 WFDC12Q8WWY7 111 aa6□□□□□ -1.45
ATXN3-238ENST00000556288 AKTIPQ9H8T0 292 aa6□□□□□ -1.45
ATXN3-238ENST00000556288 PLEKHG2Q9H7P9 1386 aa6□□□□□ -1.45
ATXN3-238ENST00000556288 HEG1Q9ULI3 1381 aa6□□□□□ -1.45
ATXN3-238ENST00000556288 LAMB4A4D0S4 1761 aa5.99□□□□□ -1.45
ATXN3-238ENST00000556288 F8W735 103 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-238ENST00000556288 SORBS3O60504 671 aa5.99□□□□□ -1.45
ATXN3-238ENST00000556288 CYP11A1P05108 521 aa5.99□□□□□ -1.45
ATXN3-238ENST00000556288 EIF4A1P60842 406 aaKnown RBP5.99□□□□□ -1.45
ATXN3-238ENST00000556288 GNAI1P63096 354 aa5.99□□□□□ -1.45
ATXN3-238ENST00000556288 CALD1Q05682 793 aaKnown RBP5.99□□□□□ -1.45
ATXN3-238ENST00000556288 POU4F3Q15319 338 aa5.99□□□□□ -1.45
ATXN3-238ENST00000556288 GPR162Q16538 588 aa5.99□□□□□ -1.45
ATXN3-238ENST00000556288 TPTE2Q6XPS3 522 aa5.99□□□□□ -1.45
ATXN3-238ENST00000556288 NLGN1Q8N2Q7 840 aa5.99□□□□□ -1.45
ATXN3-238ENST00000556288 AGGF1Q8N302 714 aaeCLIP5.99□□□□□ -1.45
ATXN3-238ENST00000556288 BCL11AQ9H165 835 aa5.99□□□□□ -1.45
ATXN3-238ENST00000556288 TMEM39AQ9NV64 488 aa5.99□□□□□ -1.45
ATXN3-238ENST00000556288 PODXL2Q9NZ53 605 aa5.99□□□□□ -1.45
ATXN3-238ENST00000556288 PPM1HQ9ULR3 514 aa5.99□□□□□ -1.45
ATXN3-238ENST00000556288 ZBTB1Q9Y2K1 713 aa5.99□□□□□ -1.45
ATXN3-238ENST00000556288 LRP5O75197 1615 aa5.99□□□□□ -1.45
ATXN3-238ENST00000556288 KCPQ6ZWJ8 1503 aa5.99□□□□□ -1.45
ATXN3-238ENST00000556288 CNTNAP4Q9C0A0 1308 aa5.99□□□□□ -1.45
ATXN3-238ENST00000556288 CEMIPQ8WUJ3 1361 aa5.98□□□□□ -1.45
ATXN3-238ENST00000556288 TCERG1O14776 1098 aaKnown RBP5.98□□□□□ -1.45
ATXN3-238ENST00000556288 FBXO24O75426 580 aa5.98□□□□□ -1.45
ATXN3-238ENST00000556288 ANXA1P04083 346 aa5.98□□□□□ -1.45
ATXN3-238ENST00000556288 MMP10P09238 476 aa5.98□□□□□ -1.45
ATXN3-238ENST00000556288 ZNF16P17020 682 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-238ENST00000556288 MAOBP27338 520 aa5.98□□□□□ -1.45
ATXN3-238ENST00000556288 NOS3P29474 1203 aa5.98□□□□□ -1.45
ATXN3-238ENST00000556288 KRT24Q2M2I5 525 aa5.98□□□□□ -1.45
ATXN3-238ENST00000556288 LCE1DQ5T752 114 aa5.98□□□□□ -1.45
ATXN3-238ENST00000556288 KIAA1211Q6ZU35 1233 aa5.98□□□□□ -1.45
ATXN3-238ENST00000556288 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.98□□□□□ -1.45
ATXN3-238ENST00000556288 TXNRD3Q86VQ6 643 aa5.98□□□□□ -1.45
ATXN3-238ENST00000556288 ZNF428Q96B54 188 aa5.98□□□□□ -1.45
ATXN3-238ENST00000556288 CORO1BQ9BR76 489 aa5.98□□□□□ -1.45
ATXN3-238ENST00000556288 SYT17Q9BSW7 474 aa5.98□□□□□ -1.45
ATXN3-238ENST00000556288 RUSC1Q9BVN2 902 aa5.98□□□□□ -1.45
ATXN3-238ENST00000556288 CEP44Q9C0F1 390 aa5.98□□□□□ -1.45
ATXN3-238ENST00000556288 VTI1BQ9UEU0 232 aa5.98□□□□□ -1.45
ATXN3-238ENST00000556288 TTF2Q9UNY4 1162 aaKnown RBP5.98□□□□□ -1.45
ATXN3-238ENST00000556288 MRC1P22897 1456 aa5.97□□□□□ -1.45
ATXN3-238ENST00000556288 TAF1P21675 1872 aa5.97□□□□□ -1.45
ATXN3-238ENST00000556288 LOC100289279A0A1B0GTE1 492 aa5.97□□□□□ -1.45
ATXN3-238ENST00000556288 GYS1P13807 737 aa5.97□□□□□ -1.45
ATXN3-238ENST00000556288 GLB1P16278 677 aa5.97□□□□□ -1.45
ATXN3-238ENST00000556288 AP3B2Q13367 1082 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms