RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 BBS9Q3SYG4 887 aa6.91□□□□□ -1.3
SCFD1-216ENST00000555550 TLR3O15455 904 aaKnown RBP6.9□□□□□ -1.3
SCFD1-216ENST00000555550 PRAMEF1O95521 474 aa6.9□□□□□ -1.3
SCFD1-216ENST00000555550 DAB2P98082 770 aa6.9□□□□□ -1.3
SCFD1-216ENST00000555550 NBPF12Q5TAG4 269 aaPredicted RBP6.9□□□□□ -1.3
SCFD1-216ENST00000555550 TMC6Q7Z403 805 aa6.9□□□□□ -1.3
SCFD1-216ENST00000555550 RELL1Q8IUW5 271 aa6.9□□□□□ -1.3
SCFD1-216ENST00000555550 GOLM1Q8NBJ4 401 aa6.9□□□□□ -1.3
SCFD1-216ENST00000555550 RHOVQ96L33 236 aa6.9□□□□□ -1.3
SCFD1-216ENST00000555550 TMEM74Q96NL1 305 aa6.9□□□□□ -1.3
SCFD1-216ENST00000555550 FADS2P1A8MWK0 482 aa6.89□□□□□ -1.31
SCFD1-216ENST00000555550 NUDT19A8MXV4 375 aa6.89□□□□□ -1.31
SCFD1-216ENST00000555550 ABLIM1O14639 778 aa6.89□□□□□ -1.31
SCFD1-216ENST00000555550 ADRB1P08588 477 aa6.89□□□□□ -1.31
SCFD1-216ENST00000555550 RAG1P15918 1043 aa6.89□□□□□ -1.31
SCFD1-216ENST00000555550 POLR2BP30876 1174 aaKnown RBP6.89□□□□□ -1.31
SCFD1-216ENST00000555550 RAB3GAP1Q15042 981 aa6.89□□□□□ -1.31
SCFD1-216ENST00000555550 HSF5Q4G112 596 aaPredicted RBP6.89□□□□□ -1.31
SCFD1-216ENST00000555550 SNAP47Q5SQN1 464 aa6.89□□□□□ -1.31
SCFD1-216ENST00000555550 REC114Q7Z4M0 266 aa6.89□□□□□ -1.31
SCFD1-216ENST00000555550 LINC01356Q8N9X3 169 aa6.89□□□□□ -1.31
SCFD1-216ENST00000555550 TP53I13Q8NBR0 393 aaPredicted RBP6.89□□□□□ -1.31
SCFD1-216ENST00000555550 ZNF512BQ96KM6 892 aaPredicted RBP6.89□□□□□ -1.31
SCFD1-216ENST00000555550 PRDM14Q9GZV8 571 aa6.89□□□□□ -1.31
SCFD1-216ENST00000555550 MEIS1O00470 390 aa6.88□□□□□ -1.31
SCFD1-216ENST00000555550 BUB1BO60566 1050 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-216ENST00000555550 PRKCAP17252 672 aa6.88□□□□□ -1.31
SCFD1-216ENST00000555550 RNF4P78317 190 aa6.88□□□□□ -1.31
SCFD1-216ENST00000555550 PLP2Q04941 152 aa6.88□□□□□ -1.31
SCFD1-216ENST00000555550 ERICH6BQ5W0A0 696 aa6.88□□□□□ -1.31
SCFD1-216ENST00000555550 OLFML2BQ68BL8 750 aa6.88□□□□□ -1.31
SCFD1-216ENST00000555550 GALNT18Q6P9A2 607 aa6.88□□□□□ -1.31
SCFD1-216ENST00000555550 SP8Q8IXZ3 490 aa6.88□□□□□ -1.31
SCFD1-216ENST00000555550 GZF1Q9H116 711 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-216ENST00000555550 TNFRSF10DQ9UBN6 386 aa6.88□□□□□ -1.31
SCFD1-216ENST00000555550 GPR55Q9Y2T6 319 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-216ENST00000555550 PCDHA5Q9Y5H7 936 aa6.88□□□□□ -1.31
SCFD1-216ENST00000555550 ARL4AP40617 200 aa6.87□□□□□ -1.31
SCFD1-216ENST00000555550 CYP4F8P98187 520 aa6.87□□□□□ -1.31
SCFD1-216ENST00000555550 XPCQ01831 940 aaPredicted RBP6.87□□□□□ -1.31
SCFD1-216ENST00000555550 MPP2Q14168 576 aa6.87□□□□□ -1.31
SCFD1-216ENST00000555550 TEPSINQ96N21 525 aa6.87□□□□□ -1.31
SCFD1-216ENST00000555550 RSRP1Q9BUV0 290 aa6.87□□□□□ -1.31
SCFD1-216ENST00000555550 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.87□□□□□ -1.31
SCFD1-216ENST00000555550 LUC7LQ9NQ29 371 aaKnown RBP6.87□□□□□ -1.31
SCFD1-216ENST00000555550 TAF6LQ9Y6J9 622 aa6.87□□□□□ -1.31
SCFD1-216ENST00000555550 WTIPA6NIX2 430 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-216ENST00000555550 FCRL2Q96LA5 508 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-216ENST00000555550 BRMS1Q9HCU9 246 aa6.86□□□□□ -1.31
SCFD1-216ENST00000555550 SIGLEC6O43699 453 aa6.85□□□□□ -1.31
SCFD1-216ENST00000555550 PRICKLE3O43900 615 aaPredicted RBP6.85□□□□□ -1.31
SCFD1-216ENST00000555550 GARTP22102 1010 aa6.85□□□□□ -1.31
SCFD1-216ENST00000555550 CEBPAP49715 358 aaPredicted RBP6.85□□□□□ -1.31
SCFD1-216ENST00000555550 MLECQ14165 292 aa6.85□□□□□ -1.31
SCFD1-216ENST00000555550 CCDC27Q2M243 656 aa6.85□□□□□ -1.31
SCFD1-216ENST00000555550 NUP43Q8NFH3 380 aa6.85□□□□□ -1.31
SCFD1-216ENST00000555550 BDH2Q9BUT1 245 aa6.85□□□□□ -1.31
SCFD1-216ENST00000555550 CDADC1Q9BWV3 514 aa6.85□□□□□ -1.31
SCFD1-216ENST00000555550 TMPRSS5Q9H3S3 457 aa6.85□□□□□ -1.31
SCFD1-216ENST00000555550 CHST7Q9NS84 486 aa6.85□□□□□ -1.31
SCFD1-216ENST00000555550 PCDHB14Q9Y5E9 798 aa6.85□□□□□ -1.31
SCFD1-216ENST00000555550 ZC3H12DA2A288 527 aaKnown RBP6.84□□□□□ -1.31
SCFD1-216ENST00000555550 FFAR3O14843 346 aa6.84□□□□□ -1.31
SCFD1-216ENST00000555550 INSRRP14616 1297 aa6.84□□□□□ -1.31
SCFD1-216ENST00000555550 LIMS1P48059 325 aa6.84□□□□□ -1.31
SCFD1-216ENST00000555550 LAPTM5Q13571 262 aa6.84□□□□□ -1.31
SCFD1-216ENST00000555550 RTP5Q14D33 572 aa6.84□□□□□ -1.31
SCFD1-216ENST00000555550 ZXDCQ2QGD7 858 aaPredicted RBP6.84□□□□□ -1.31
SCFD1-216ENST00000555550 RPTNQ6XPR3 784 aa6.84□□□□□ -1.31
SCFD1-216ENST00000555550 FAM196AQ6ZSG2 479 aa6.84□□□□□ -1.31
SCFD1-216ENST00000555550 TMC4Q7Z404 712 aa6.84□□□□□ -1.31
SCFD1-216ENST00000555550 FRMD5Q7Z6J6 570 aa6.84□□□□□ -1.31
SCFD1-216ENST00000555550 SLCO6A1Q86UG4 719 aa6.84□□□□□ -1.31
SCFD1-216ENST00000555550 TMEM52Q8NDY8 209 aa6.84□□□□□ -1.31
SCFD1-216ENST00000555550 ERVK13-1Q9NX77 482 aa6.84□□□□□ -1.31
SCFD1-216ENST00000555550 FBXL19Q6PCT2 694 aa6.83□□□□□ -1.32
SCFD1-216ENST00000555550 ADGRG2Q8IZP9 1017 aa6.83□□□□□ -1.32
SCFD1-216ENST00000555550 AP5S1Q9NUS5 200 aa6.83□□□□□ -1.32
SCFD1-216ENST00000555550 GFOD1Q9NXC2 390 aa6.83□□□□□ -1.32
SCFD1-216ENST00000555550 GMIPQ9P107 970 aa6.83□□□□□ -1.32
SCFD1-216ENST00000555550 ACSL6Q9UKU0 697 aa6.83□□□□□ -1.32
SCFD1-216ENST00000555550 CLEC3AO75596 197 aa6.82□□□□□ -1.32
SCFD1-216ENST00000555550 CTSKP43235 329 aa6.82□□□□□ -1.32
SCFD1-216ENST00000555550 KCNC1P48547 511 aa6.82□□□□□ -1.32
SCFD1-216ENST00000555550 TMEM62Q0P6H9 643 aa6.82□□□□□ -1.32
SCFD1-216ENST00000555550 PWP1Q13610 501 aa6.82□□□□□ -1.32
SCFD1-216ENST00000555550 CBX2Q14781 532 aaPredicted RBP6.82□□□□□ -1.32
SCFD1-216ENST00000555550 CWF19L2Q2TBE0 894 aaKnown RBP6.82□□□□□ -1.32
SCFD1-216ENST00000555550 OVOS1Q6IE37 1185 aa6.82□□□□□ -1.32
SCFD1-216ENST00000555550 DNAJC14Q6Y2X3 702 aaPredicted RBP6.82□□□□□ -1.32
SCFD1-216ENST00000555550 JMJD8Q96S16 334 aa6.82□□□□□ -1.32
SCFD1-216ENST00000555550 TNFRSF12AQ9NP84 129 aa6.82□□□□□ -1.32
SCFD1-216ENST00000555550 IMPACTQ9P2X3 320 aa6.82□□□□□ -1.32
SCFD1-216ENST00000555550 FBXL21Q9UKT6 434 aa6.82□□□□□ -1.32
SCFD1-216ENST00000555550 A0A1B0GTL3 188 aa6.81□□□□□ -1.32
SCFD1-216ENST00000555550 A0A1W2PQ45 241 aaPredicted RBP6.81□□□□□ -1.32
SCFD1-216ENST00000555550 A0A1W2PQY0 241 aa6.81□□□□□ -1.32
SCFD1-216ENST00000555550 SLURP1P55000 103 aa6.81□□□□□ -1.32
SCFD1-216ENST00000555550 ZNF200P98182 395 aaPredicted RBP6.81□□□□□ -1.32
SCFD1-216ENST00000555550 EFEMP1Q12805 493 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms