RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 SLC1A4P43007 532 aa16.13■□□□□ 0.17
SNX6-203ENST00000555416 SNAP25P60880 206 aa16.13■□□□□ 0.17
SNX6-203ENST00000555416 CACNB2Q08289 660 aaPredicted RBP16.13■□□□□ 0.17
SNX6-203ENST00000555416 BMP2KLQ5H9B9 411 aa16.13■□□□□ 0.17
SNX6-203ENST00000555416 MAP3K21Q5TCX8 1036 aa16.13■□□□□ 0.17
SNX6-203ENST00000555416 TTBK2Q6IQ55 1244 aa16.13■□□□□ 0.17
SNX6-203ENST00000555416 ESR2Q92731 530 aa16.13■□□□□ 0.17
SNX6-203ENST00000555416 RAVER2Q9HCJ3 691 aaKnown RBP16.13■□□□□ 0.17
SNX6-203ENST00000555416 ZSWIM5Q9P217 1185 aa16.13■□□□□ 0.17
SNX6-203ENST00000555416 IVNS1ABPQ9Y6Y0 642 aa16.13■□□□□ 0.17
SNX6-203ENST00000555416 IGHA2P01877 340 aa16.12■□□□□ 0.17
SNX6-203ENST00000555416 HOXC6P09630 235 aa16.12■□□□□ 0.17
SNX6-203ENST00000555416 TOP1P11387 765 aaKnown RBP16.12■□□□□ 0.17
SNX6-203ENST00000555416 TAL1P17542 331 aaPredicted RBP16.12■□□□□ 0.17
SNX6-203ENST00000555416 GJA8P48165 433 aa16.12■□□□□ 0.17
SNX6-203ENST00000555416 STOX1Q6ZVD7 989 aa16.12■□□□□ 0.17
SNX6-203ENST00000555416 CYB5R4Q7L1T6 521 aa16.12■□□□□ 0.17
SNX6-203ENST00000555416 CPXCR1Q8N123 301 aa16.12■□□□□ 0.17
SNX6-203ENST00000555416 U2AF1L4Q8WU68 220 aaKnown RBP16.12■□□□□ 0.17
SNX6-203ENST00000555416 DEFB118Q96PH6 123 aa16.12■□□□□ 0.17
SNX6-203ENST00000555416 ESYT1Q9BSJ8 1104 aa16.12■□□□□ 0.17
SNX6-203ENST00000555416 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.12■□□□□ 0.178e-7■□□□□ 9.9
SNX6-203ENST00000555416 MROH8Q9H579 483 aa16.12■□□□□ 0.17
SNX6-203ENST00000555416 SLC38A10Q9HBR0 1119 aa16.12■□□□□ 0.17
SNX6-203ENST00000555416 PAK6Q9NQU5 681 aaPredicted RBP16.12■□□□□ 0.17
SNX6-203ENST00000555416 ISY1Q9ULR0 285 aaKnown RBP16.12■□□□□ 0.17
SNX6-203ENST00000555416 ZNF236Q9UL36 1845 aa16.12■□□□□ 0.17
SNX6-203ENST00000555416 PRKAR2AP13861 404 aaKnown RBP16.11■□□□□ 0.17
SNX6-203ENST00000555416 ZKSCAN1P17029 563 aaPredicted RBP16.11■□□□□ 0.17
SNX6-203ENST00000555416 SLC16A2P36021 539 aa16.11■□□□□ 0.17
SNX6-203ENST00000555416 SLC4A3P48751 1232 aa16.11■□□□□ 0.17
SNX6-203ENST00000555416 COL9A3Q14050 684 aaPredicted RBP16.11■□□□□ 0.17
SNX6-203ENST00000555416 PPP4R3BQ5MIZ7 849 aa16.11■□□□□ 0.17
SNX6-203ENST00000555416 SNRNP48Q6IEG0 339 aaKnown RBP16.11■□□□□ 0.17
SNX6-203ENST00000555416 MAP4K1Q92918 833 aa16.11■□□□□ 0.17
SNX6-203ENST00000555416 TEX13BQ9BXU2 312 aa16.11■□□□□ 0.17
SNX6-203ENST00000555416 LSG1Q9H089 658 aaKnown RBP16.11■□□□□ 0.17
SNX6-203ENST00000555416 RBM8AQ9Y5S9 174 aaKnown RBP16.11■□□□□ 0.17
SNX6-203ENST00000555416 ZNF536O15090 1300 aa16.11■□□□□ 0.17
SNX6-203ENST00000555416 FRMPD2Q68DX3 1309 aaPredicted RBP16.11■□□□□ 0.17
SNX6-203ENST00000555416 ATP2A1O14983 1001 aa16.1■□□□□ 0.17
SNX6-203ENST00000555416 STRNO43815 780 aa16.1■□□□□ 0.17
SNX6-203ENST00000555416 ZBED4O75132 1171 aa16.1■□□□□ 0.17
SNX6-203ENST00000555416 SLC25A27O95847 323 aa16.1■□□□□ 0.17
SNX6-203ENST00000555416 NEFLP07196 543 aa16.1■□□□□ 0.17
SNX6-203ENST00000555416 PGK2P07205 417 aa16.1■□□□□ 0.17
SNX6-203ENST00000555416 PDHBP11177 359 aa16.1■□□□□ 0.17
SNX6-203ENST00000555416 CCND3P30281 292 aaPredicted RBP16.1■□□□□ 0.17
SNX6-203ENST00000555416 CYP2C19P33261 490 aa16.1■□□□□ 0.17
SNX6-203ENST00000555416 STAT2P52630 851 aa16.1■□□□□ 0.17
SNX6-203ENST00000555416 CCDC96Q2M329 555 aa16.1■□□□□ 0.17
SNX6-203ENST00000555416 ENAHQ8N8S7 591 aaPredicted RBP16.1■□□□□ 0.17
SNX6-203ENST00000555416 TTC14Q96N46 770 aa16.1■□□□□ 0.17
SNX6-203ENST00000555416 GPCPD1Q9NPB8 672 aa16.1■□□□□ 0.17
SNX6-203ENST00000555416 PRR12Q9ULL5 1215 aa16.1■□□□□ 0.17
SNX6-203ENST00000555416 U3KPZ7 1027 aaPredicted RBP16.1■□□□□ 0.17
SNX6-203ENST00000555416 ZNFX1Q9P2E3 1918 aaKnown RBP16.09■□□□□ 0.17
SNX6-203ENST00000555416 PLA2G6O60733 806 aa16.09■□□□□ 0.17
SNX6-203ENST00000555416 SGPL1O95470 568 aa16.09■□□□□ 0.17
SNX6-203ENST00000555416 SNHG28P0DPA3 235 aa16.09■□□□□ 0.17
SNX6-203ENST00000555416 FCER1AP12319 257 aa16.09■□□□□ 0.17
SNX6-203ENST00000555416 IKQ13123 557 aaPredicted RBP16.09■□□□□ 0.17
SNX6-203ENST00000555416 UBE2Q1Q7Z7E8 422 aa16.09■□□□□ 0.17
SNX6-203ENST00000555416 DPP9Q86TI2 863 aa16.09■□□□□ 0.17
SNX6-203ENST00000555416 FAM160B2Q86V87 743 aa16.09■□□□□ 0.17
SNX6-203ENST00000555416 ABRAQ8N0Z2 381 aa16.09■□□□□ 0.17
SNX6-203ENST00000555416 TRPV1Q8NER1 839 aa16.09■□□□□ 0.17
SNX6-203ENST00000555416 CHURC1Q8WUH1 139 aa16.09■□□□□ 0.17
SNX6-203ENST00000555416 DCAF4Q8WV16 495 aa16.09■□□□□ 0.17
SNX6-203ENST00000555416 ANKS1AQ92625 1134 aa16.09■□□□□ 0.17
SNX6-203ENST00000555416 AGBL1Q96MI9 1066 aa16.09■□□□□ 0.17
SNX6-203ENST00000555416 ZSCAN10Q96SZ4 725 aaPredicted RBP16.09■□□□□ 0.17
SNX6-203ENST00000555416 MMP19Q99542 508 aa16.09■□□□□ 0.17
SNX6-203ENST00000555416 CRISPLD2Q9H0B8 497 aa16.09■□□□□ 0.17
SNX6-203ENST00000555416 PDE4DIPQ5VU43 2346 aa16.09■□□□□ 0.17
SNX6-203ENST00000555416 RPTORQ8N122 1335 aa16.09■□□□□ 0.17
SNX6-203ENST00000555416 SMCHD1A6NHR9 2005 aa16.08■□□□□ 0.16
SNX6-203ENST00000555416 E7EWF7 191 aa16.08■□□□□ 0.16
SNX6-203ENST00000555416 GOLGA8HP0CJ92 632 aa16.08■□□□□ 0.16
SNX6-203ENST00000555416 ZNF543Q08ER8 600 aa16.08■□□□□ 0.16
SNX6-203ENST00000555416 CCDC174Q6PII3 467 aa16.08■□□□□ 0.16
SNX6-203ENST00000555416 BTNL9Q6UXG8 535 aa16.08■□□□□ 0.16
SNX6-203ENST00000555416 DGKHQ86XP1 1220 aa16.08■□□□□ 0.16
SNX6-203ENST00000555416 TRMT44Q8IYL2 757 aaKnown RBP16.08■□□□□ 0.16
SNX6-203ENST00000555416 KRT23Q9C075 422 aa16.08■□□□□ 0.16
SNX6-203ENST00000555416 CPVLQ9H3G5 476 aa16.08■□□□□ 0.16
SNX6-203ENST00000555416 SENP2Q9HC62 589 aa16.08■□□□□ 0.16
SNX6-203ENST00000555416 HMX1Q9NP08 348 aaPredicted RBP16.08■□□□□ 0.16
SNX6-203ENST00000555416 TNKSO95271 1327 aa16.08■□□□□ 0.16
SNX6-203ENST00000555416 SEC23AQ15436 765 aa16.07■□□□□ 0.16
SNX6-203ENST00000555416 ZNF792Q3KQV3 632 aa16.07■□□□□ 0.16
SNX6-203ENST00000555416 PRAMEF19Q5SWL8 479 aa16.07■□□□□ 0.16
SNX6-203ENST00000555416 IQCA1Q86XH1 822 aa16.07■□□□□ 0.16
SNX6-203ENST00000555416 PNMA1Q8ND90 353 aa16.07■□□□□ 0.16
SNX6-203ENST00000555416 MAML3Q96JK9 1138 aa16.07■□□□□ 0.16
SNX6-203ENST00000555416 CNNM2Q9H8M5 875 aa16.07■□□□□ 0.16
SNX6-203ENST00000555416 HOMER2Q9NSB8 354 aa16.07■□□□□ 0.16
SNX6-203ENST00000555416 DNAJC25-GNG10A0A024R161 153 aa16.06■□□□□ 0.16
SNX6-203ENST00000555416 TFRCP02786 760 aaKnown RBP16.06■□□□□ 0.16
SNX6-203ENST00000555416 MNX1P50219 401 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms