RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 AMIGO3Q86WK7 504 aa5.5□□□□□ -1.53
CPSF2-204ENST00000555244 FMR1NBQ8N0W7 255 aaPredicted RBP5.5□□□□□ -1.53
CPSF2-204ENST00000555244 LINC00116Q8NCU8 138 aa5.5□□□□□ -1.53
CPSF2-204ENST00000555244 CFAP53Q96M91 514 aa5.5□□□□□ -1.53
CPSF2-204ENST00000555244 CORO1BQ9BR76 489 aa5.5□□□□□ -1.53
CPSF2-204ENST00000555244 LGR6Q9HBX8 967 aa5.5□□□□□ -1.53
CPSF2-204ENST00000555244 CBX8Q9HC52 389 aa5.5□□□□□ -1.53
CPSF2-204ENST00000555244 KBTBD4Q9NVX7 518 aa5.5□□□□□ -1.53
CPSF2-204ENST00000555244 DDX41Q9UJV9 622 aaKnown RBP5.5□□□□□ -1.53
CPSF2-204ENST00000555244 TUBGCP6Q96RT7 1819 aa5.5□□□□□ -1.53
CPSF2-204ENST00000555244 SCN11AQ9UI33 1791 aa5.5□□□□□ -1.53
CPSF2-204ENST00000555244 UBR3Q6ZT12 1888 aa5.49□□□□□ -1.53
CPSF2-204ENST00000555244 RPS6KA4O75676 772 aa5.49□□□□□ -1.53
CPSF2-204ENST00000555244 HMOX1P09601 288 aa5.49□□□□□ -1.53
CPSF2-204ENST00000555244 ARNTP27540 789 aa5.49□□□□□ -1.53
CPSF2-204ENST00000555244 POLD1P28340 1107 aa5.49□□□□□ -1.53
CPSF2-204ENST00000555244 CD68P34810 354 aaPredicted RBP5.49□□□□□ -1.53
CPSF2-204ENST00000555244 RAD51AP2Q09MP3 1159 aa5.49□□□□□ -1.53
CPSF2-204ENST00000555244 SETDB1Q15047 1291 aa5.49□□□□□ -1.53
CPSF2-204ENST00000555244 RALBP1Q15311 655 aa5.49□□□□□ -1.53
CPSF2-204ENST00000555244 POU4F3Q15319 338 aa5.49□□□□□ -1.53
CPSF2-204ENST00000555244 XP32Q5T750 250 aa5.49□□□□□ -1.53
CPSF2-204ENST00000555244 SCARA3Q6AZY7 606 aa5.49□□□□□ -1.53
CPSF2-204ENST00000555244 LLGL2Q6P1M3 1020 aa5.49□□□□□ -1.53
CPSF2-204ENST00000555244 AGMOQ6ZNB7 445 aa5.49□□□□□ -1.53
CPSF2-204ENST00000555244 IL17REQ8NFR9 667 aa5.49□□□□□ -1.53
CPSF2-204ENST00000555244 TRIM56Q9BRZ2 755 aaKnown RBP5.49□□□□□ -1.53
CPSF2-204ENST00000555244 PPP1R1BQ9UD71 204 aaPredicted RBP5.49□□□□□ -1.53
CPSF2-204ENST00000555244 NUDCQ9Y266 331 aa5.49□□□□□ -1.53
CPSF2-204ENST00000555244 CD2APQ9Y5K6 639 aa5.49□□□□□ -1.53
CPSF2-204ENST00000555244 GNAT3A8MTJ3 354 aa5.48□□□□□ -1.53
CPSF2-204ENST00000555244 MINDY4BA8MYZ0 360 aa5.48□□□□□ -1.53
CPSF2-204ENST00000555244 PAGE1O75459 146 aa5.48□□□□□ -1.53
CPSF2-204ENST00000555244 GSTP1P09211 210 aaKnown RBP5.48□□□□□ -1.53
CPSF2-204ENST00000555244 BMP6P22004 513 aa5.48□□□□□ -1.53
CPSF2-204ENST00000555244 EIF4A3P38919 411 aaKnown RBP5.48□□□□□ -1.53
CPSF2-204ENST00000555244 LMNB2Q03252 620 aa5.48□□□□□ -1.53
CPSF2-204ENST00000555244 ADGRE1Q14246 886 aa5.48□□□□□ -1.53
CPSF2-204ENST00000555244 MBTPS1Q14703 1052 aa5.48□□□□□ -1.53
CPSF2-204ENST00000555244 INTS5Q6P9B9 1019 aaKnown RBP5.48□□□□□ -1.53
CPSF2-204ENST00000555244 FBXO11Q86XK2 927 aa5.48□□□□□ -1.53
CPSF2-204ENST00000555244 PHC3Q8NDX5 983 aa5.48□□□□□ -1.53
CPSF2-204ENST00000555244 KLHDC7BQ96G42 594 aa5.48□□□□□ -1.53
CPSF2-204ENST00000555244 PHACTR3Q96KR7 559 aa5.48□□□□□ -1.53
CPSF2-204ENST00000555244 PLEKHF1Q96S99 279 aa5.48□□□□□ -1.53
CPSF2-204ENST00000555244 MIR1-1HGQ9H1L0 117 aa5.48□□□□□ -1.53
CPSF2-204ENST00000555244 COPRSQ9NQ92 184 aa5.48□□□□□ -1.53
CPSF2-204ENST00000555244 PCDHGB7Q9Y5F8 929 aa5.48□□□□□ -1.53
CPSF2-204ENST00000555244 COL5A3P25940 1745 aaPredicted RBP5.48□□□□□ -1.53
CPSF2-204ENST00000555244 KCPQ6ZWJ8 1503 aa5.48□□□□□ -1.53
CPSF2-204ENST00000555244 MYH14Q7Z406 1995 aaKnown RBP5.47□□□□□ -1.53
CPSF2-204ENST00000555244 DYRK3O43781 588 aa5.47□□□□□ -1.53
CPSF2-204ENST00000555244 CYP19A1P11511 503 aaPredicted RBP5.47□□□□□ -1.53
CPSF2-204ENST00000555244 PRKAR2BP31323 418 aa5.47□□□□□ -1.53
CPSF2-204ENST00000555244 ZEB1P37275 1124 aaPredicted RBP5.47□□□□□ -1.53
CPSF2-204ENST00000555244 NLRP12P59046 1061 aa5.47□□□□□ -1.53
CPSF2-204ENST00000555244 RACK1P63244 317 aaKnown RBP5.47□□□□□ -1.53
CPSF2-204ENST00000555244 CAMK2GQ13555 558 aaPredicted RBP5.47□□□□□ -1.53
CPSF2-204ENST00000555244 NKAPLQ5M9Q1 402 aa5.47□□□□□ -1.53
CPSF2-204ENST00000555244 SNAP47Q5SQN1 464 aa5.47□□□□□ -1.53
CPSF2-204ENST00000555244 ZMYM1Q5SVZ6 1142 aa5.47□□□□□ -1.53
CPSF2-204ENST00000555244 CCDC84Q86UT8 332 aaPredicted RBP5.47□□□□□ -1.53
CPSF2-204ENST00000555244 VPS37DQ86XT2 251 aa5.47□□□□□ -1.53
CPSF2-204ENST00000555244 KIAA0825Q8IV33 1275 aa5.47□□□□□ -1.53
CPSF2-204ENST00000555244 NLGN1Q8N2Q7 840 aa5.47□□□□□ -1.53
CPSF2-204ENST00000555244 Q8N3U1 123 aa5.47□□□□□ -1.53
CPSF2-204ENST00000555244 GALNT11Q8NCW6 608 aa5.47□□□□□ -1.53
CPSF2-204ENST00000555244 KCNB2Q92953 911 aa5.47□□□□□ -1.53
CPSF2-204ENST00000555244 LENG1Q96BZ8 264 aaPredicted RBP5.47□□□□□ -1.53
CPSF2-204ENST00000555244 RHOVQ96L33 236 aa5.47□□□□□ -1.53
CPSF2-204ENST00000555244 SPON2Q9BUD6 331 aa5.47□□□□□ -1.53
CPSF2-204ENST00000555244 TEX13AQ9BXU3 409 aaPredicted RBP5.47□□□□□ -1.53
CPSF2-204ENST00000555244 USP26Q9BXU7 913 aa5.47□□□□□ -1.53
CPSF2-204ENST00000555244 CAPN10Q9HC96 672 aa5.47□□□□□ -1.53
CPSF2-204ENST00000555244 KRT82Q9NSB4 513 aa5.47□□□□□ -1.53
CPSF2-204ENST00000555244 TLR6Q9Y2C9 796 aa5.47□□□□□ -1.53
CPSF2-204ENST00000555244 INPP5FQ9Y2H2 1132 aa5.47□□□□□ -1.53
CPSF2-204ENST00000555244 SUPT16HQ9Y5B9 1047 aaKnown RBP5.47□□□□□ -1.53
CPSF2-204ENST00000555244 F6X3S4 739 aa5.46□□□□□ -1.54
CPSF2-204ENST00000555244 U2SURPO15042 1029 aaKnown RBP5.46□□□□□ -1.54
CPSF2-204ENST00000555244 DEAF1O75398 565 aaPredicted RBP5.46□□□□□ -1.54
CPSF2-204ENST00000555244 PF4P02776 101 aa5.46□□□□□ -1.54
CPSF2-204ENST00000555244 U2AF1L5P0DN76 240 aaPredicted RBP5.46□□□□□ -1.54
CPSF2-204ENST00000555244 GYS1P13807 737 aa5.46□□□□□ -1.54
CPSF2-204ENST00000555244 TFE3P19532 575 aaPredicted RBP5.46□□□□□ -1.54
CPSF2-204ENST00000555244 MAOBP27338 520 aa5.46□□□□□ -1.54
CPSF2-204ENST00000555244 TM4SF1P30408 202 aa5.46□□□□□ -1.54
CPSF2-204ENST00000555244 CRKLP46109 303 aaKnown RBP5.46□□□□□ -1.54
CPSF2-204ENST00000555244 U2AF1Q01081 240 aaKnown RBP eCLIP5.46□□□□□ -1.54
CPSF2-204ENST00000555244 NRG1Q02297 640 aaPredicted RBP5.46□□□□□ -1.54
CPSF2-204ENST00000555244 PDE3AQ14432 1141 aa5.46□□□□□ -1.54
CPSF2-204ENST00000555244 DUOXA2Q1HG44 320 aa5.46□□□□□ -1.54
CPSF2-204ENST00000555244 NAALADL2Q58DX5 795 aa5.46□□□□□ -1.54
CPSF2-204ENST00000555244 MAP1SQ66K74 1059 aaPredicted RBP5.46□□□□□ -1.54
CPSF2-204ENST00000555244 HGSNATQ68CP4 663 aa5.46□□□□□ -1.54
CPSF2-204ENST00000555244 ZNF790Q6PG37 636 aa5.46□□□□□ -1.54
CPSF2-204ENST00000555244 TXNRD3Q86VQ6 643 aa5.46□□□□□ -1.54
CPSF2-204ENST00000555244 TRIM42Q8IWZ5 723 aa5.46□□□□□ -1.54
CPSF2-204ENST00000555244 TP53INP1Q96A56 240 aa5.46□□□□□ -1.54
CPSF2-204ENST00000555244 SPATA32Q96LK8 384 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms