RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 TNFRSF12AQ9NP84 129 aa4.66□□□□□ -1.66
SRP54-204ENST00000553923 TNFRSF10DQ9UBN6 386 aa4.66□□□□□ -1.66
SRP54-204ENST00000553923 MPOP05164 745 aa4.65□□□□□ -1.67
SRP54-204ENST00000553923 SYPP08247 313 aa4.65□□□□□ -1.67
SRP54-204ENST00000553923 DAB2P98082 770 aa4.65□□□□□ -1.67
SRP54-204ENST00000553923 ZFYVE27Q5T4F4 411 aa4.65□□□□□ -1.67
SRP54-204ENST00000553923 OLFML2BQ68BL8 750 aa4.65□□□□□ -1.67
SRP54-204ENST00000553923 GALNT18Q6P9A2 607 aa4.65□□□□□ -1.67
SRP54-204ENST00000553923 C14orf37Q86TY3 774 aa4.65□□□□□ -1.67
SRP54-204ENST00000553923 SLCO6A1Q86UG4 719 aa4.65□□□□□ -1.67
SRP54-204ENST00000553923 FCRL2Q96LA5 508 aaPredicted RBP4.65□□□□□ -1.67
SRP54-204ENST00000553923 ACSL6Q9UKU0 697 aa4.65□□□□□ -1.67
SRP54-204ENST00000553923 WTIPA6NIX2 430 aaPredicted RBP4.64□□□□□ -1.67
SRP54-204ENST00000553923 SIGLEC6O43699 453 aa4.64□□□□□ -1.67
SRP54-204ENST00000553923 BUB1BO60566 1050 aaPredicted RBP4.64□□□□□ -1.67
SRP54-204ENST00000553923 FKTNO75072 461 aa4.64□□□□□ -1.67
SRP54-204ENST00000553923 PRAMEF1O95521 474 aa4.64□□□□□ -1.67
SRP54-204ENST00000553923 RNF4P78317 190 aa4.64□□□□□ -1.67
SRP54-204ENST00000553923 LAPTM5Q13571 262 aa4.64□□□□□ -1.67
SRP54-204ENST00000553923 MPP2Q14168 576 aa4.64□□□□□ -1.67
SRP54-204ENST00000553923 RTP5Q14D33 572 aa4.64□□□□□ -1.67
SRP54-204ENST00000553923 ERICH6BQ5W0A0 696 aa4.64□□□□□ -1.67
SRP54-204ENST00000553923 TMC6Q7Z403 805 aa4.64□□□□□ -1.67
SRP54-204ENST00000553923 REC114Q7Z4M0 266 aa4.64□□□□□ -1.67
SRP54-204ENST00000553923 TMEM52Q8NDY8 209 aa4.64□□□□□ -1.67
SRP54-204ENST00000553923 FBXO27Q8NI29 283 aa4.64□□□□□ -1.67
SRP54-204ENST00000553923 BORCS6Q96GS4 357 aa4.64□□□□□ -1.67
SRP54-204ENST00000553923 TMEM74Q96NL1 305 aa4.64□□□□□ -1.67
SRP54-204ENST00000553923 RSRP1Q9BUV0 290 aa4.64□□□□□ -1.67
SRP54-204ENST00000553923 ERVK13-1Q9NX77 482 aa4.64□□□□□ -1.67
SRP54-204ENST00000553923 PARP2Q9UGN5 583 aa4.64□□□□□ -1.67
SRP54-204ENST00000553923 MINPP1Q9UNW1 487 aa4.64□□□□□ -1.67
SRP54-204ENST00000553923 SSU72P8A0A1W2PR75 194 aa4.63□□□□□ -1.67
SRP54-204ENST00000553923 FBLN1P23142 703 aa4.63□□□□□ -1.67
SRP54-204ENST00000553923 SLURP1P55000 103 aa4.63□□□□□ -1.67
SRP54-204ENST00000553923 NCKAP1LP55160 1127 aa4.63□□□□□ -1.67
SRP54-204ENST00000553923 PLP2Q04941 152 aa4.63□□□□□ -1.67
SRP54-204ENST00000553923 RAB3GAP1Q15042 981 aa4.63□□□□□ -1.67
SRP54-204ENST00000553923 VWA3BQ502W6 1294 aa4.63□□□□□ -1.67
SRP54-204ENST00000553923 ARSHQ5FYA8 562 aa4.63□□□□□ -1.67
SRP54-204ENST00000553923 RPTNQ6XPR3 784 aa4.63□□□□□ -1.67
SRP54-204ENST00000553923 BDH2Q9BUT1 245 aa4.63□□□□□ -1.67
SRP54-204ENST00000553923 PRDM14Q9GZV8 571 aa4.63□□□□□ -1.67
SRP54-204ENST00000553923 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.63□□□□□ -1.67
SRP54-204ENST00000553923 GPR55Q9Y2T6 319 aaPredicted RBP4.63□□□□□ -1.67
SRP54-204ENST00000553923 A0A1W2PQ45 241 aaPredicted RBP4.62□□□□□ -1.67
SRP54-204ENST00000553923 A0A1W2PQY0 241 aa4.62□□□□□ -1.67
SRP54-204ENST00000553923 ZNF205O95201 554 aa4.62□□□□□ -1.67
SRP54-204ENST00000553923 ATE1O95260 518 aa4.62□□□□□ -1.67
SRP54-204ENST00000553923 PRKCAP17252 672 aa4.62□□□□□ -1.67
SRP54-204ENST00000553923 CTSKP43235 329 aa4.62□□□□□ -1.67
SRP54-204ENST00000553923 KCNA1Q09470 495 aa4.62□□□□□ -1.67
SRP54-204ENST00000553923 EAPPQ56P03 285 aaPredicted RBP4.62□□□□□ -1.67
SRP54-204ENST00000553923 CDCP2Q5VXM1 449 aa4.62□□□□□ -1.67
SRP54-204ENST00000553923 DIEXFQ68CQ4 756 aaKnown RBP4.62□□□□□ -1.67
SRP54-204ENST00000553923 HHIPL2Q6UWX4 724 aa4.62□□□□□ -1.67
SRP54-204ENST00000553923 CNOT11Q9UKZ1 510 aaKnown RBP4.62□□□□□ -1.67
SRP54-204ENST00000553923 TAF6LQ9Y6J9 622 aa4.62□□□□□ -1.67
SRP54-204ENST00000553923 PLA2G1BP04054 148 aaKnown RBP4.61□□□□□ -1.67
SRP54-204ENST00000553923 INSRRP14616 1297 aa4.61□□□□□ -1.67
SRP54-204ENST00000553923 POLR2BP30876 1174 aaKnown RBP4.61□□□□□ -1.67
SRP54-204ENST00000553923 ARL4AP40617 200 aa4.61□□□□□ -1.67
SRP54-204ENST00000553923 KCNC1P48547 511 aa4.61□□□□□ -1.67
SRP54-204ENST00000553923 CYP4F8P98187 520 aa4.61□□□□□ -1.67
SRP54-204ENST00000553923 FAM160A1Q05DH4 1040 aa4.61□□□□□ -1.67
SRP54-204ENST00000553923 TMEM62Q0P6H9 643 aa4.61□□□□□ -1.67
SRP54-204ENST00000553923 PLEKHN1Q494U1 663 aaPredicted RBP4.61□□□□□ -1.67
SRP54-204ENST00000553923 FAM196AQ6ZSG2 479 aa4.61□□□□□ -1.67
SRP54-204ENST00000553923 TMC4Q7Z404 712 aa4.61□□□□□ -1.67
SRP54-204ENST00000553923 GOLM1Q8NBJ4 401 aa4.61□□□□□ -1.67
SRP54-204ENST00000553923 CNNM2Q9H8M5 875 aa4.61□□□□□ -1.67
SRP54-204ENST00000553923 KCNQ5Q9NR82 932 aa4.61□□□□□ -1.67
SRP54-204ENST00000553923 MYRFQ9Y2G1 1151 aa4.61□□□□□ -1.67
SRP54-204ENST00000553923 ANKRD33BA6NCL7 494 aa4.6□□□□□ -1.67
SRP54-204ENST00000553923 NUDT19A8MXV4 375 aa4.6□□□□□ -1.67
SRP54-204ENST00000553923 MSL3P1P0C860 447 aa4.6□□□□□ -1.67
SRP54-204ENST00000553923 RAG1P15918 1043 aa4.6□□□□□ -1.67
SRP54-204ENST00000553923 GBP2P32456 591 aaPredicted RBP4.6□□□□□ -1.67
SRP54-204ENST00000553923 BMP8BP34820 402 aa4.6□□□□□ -1.67
SRP54-204ENST00000553923 LIMS1P48059 325 aa4.6□□□□□ -1.67
SRP54-204ENST00000553923 MAPKAPK2P49137 400 aa4.6□□□□□ -1.67
SRP54-204ENST00000553923 MVKQ03426 396 aa4.6□□□□□ -1.67
SRP54-204ENST00000553923 RELL1Q8IUW5 271 aa4.6□□□□□ -1.67
SRP54-204ENST00000553923 NUP43Q8NFH3 380 aa4.6□□□□□ -1.67
SRP54-204ENST00000553923 JMJD8Q96S16 334 aa4.6□□□□□ -1.67
SRP54-204ENST00000553923 LRRC3Q9BY71 257 aa4.6□□□□□ -1.67
SRP54-204ENST00000553923 CHST7Q9NS84 486 aa4.6□□□□□ -1.67
SRP54-204ENST00000553923 PLA2G2DQ9UNK4 145 aa4.6□□□□□ -1.67
SRP54-204ENST00000553923 MINDY4BA8MYZ0 360 aa4.59□□□□□ -1.67
SRP54-204ENST00000553923 GREM1O60565 184 aa4.59□□□□□ -1.67
SRP54-204ENST00000553923 VAV1P15498 845 aa4.59□□□□□ -1.67
SRP54-204ENST00000553923 HTRA3P83110 453 aa4.59□□□□□ -1.67
SRP54-204ENST00000553923 DLX2Q07687 328 aaPredicted RBP4.59□□□□□ -1.67
SRP54-204ENST00000553923 RAD51AP2Q09MP3 1159 aa4.59□□□□□ -1.67
SRP54-204ENST00000553923 PSMD2Q13200 908 aa4.59□□□□□ -1.67
SRP54-204ENST00000553923 RTP2Q5QGT7 225 aa4.59□□□□□ -1.67
SRP54-204ENST00000553923 SNAP47Q5SQN1 464 aa4.59□□□□□ -1.67
SRP54-204ENST00000553923 OVOS1Q6IE37 1185 aa4.59□□□□□ -1.67
SRP54-204ENST00000553923 FBXL19Q6PCT2 694 aa4.59□□□□□ -1.67
SRP54-204ENST00000553923 FNIP1Q8TF40 1166 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms