RNA–Protein interactions for RNA: ENST00000553804.5

ITGA7-206, Transcript of integrin subunit alpha 7, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGA7, Length 3,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITGA7-206	ENST00000553804	CCNI2	Q6ZMN8	369 aa	Predicted RBP	11.63	□□□□□ -0.55
ITGA7-206	ENST00000553804	IFT20	Q8IY31	132 aa		11.63	□□□□□ -0.55
ITGA7-206	ENST00000553804	CSGALNACT2	Q8N6G5	542 aa		11.63	□□□□□ -0.55
ITGA7-206	ENST00000553804	ARFGAP2	Q8N6H7	521 aa		11.63	□□□□□ -0.55
ITGA7-206	ENST00000553804	MIGA1	Q8NAN2	632 aa		11.63	□□□□□ -0.55
ITGA7-206	ENST00000553804	KRT12	Q99456	494 aa		11.63	□□□□□ -0.55
ITGA7-206	ENST00000553804	YIPF3	Q9GZM5	350 aa		11.63	□□□□□ -0.55
ITGA7-206	ENST00000553804	MLXIP	Q9HAP2	919 aa		11.63	□□□□□ -0.55
ITGA7-206	ENST00000553804	NLRC4	Q9NPP4	1024 aa		11.63	□□□□□ -0.55
ITGA7-206	ENST00000553804	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.63	□□□□□ -0.55
ITGA7-206	ENST00000553804	ZNF609	O15014	1411 aa		11.63	□□□□□ -0.55
ITGA7-206	ENST00000553804	KNDC1	Q76NI1	1749 aa		11.63	□□□□□ -0.55
ITGA7-206	ENST00000553804	MON2	Q7Z3U7	1717 aa		11.63	□□□□□ -0.55
ITGA7-206	ENST00000553804	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	MYZAP	P0CAP1	466 aa		11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	GPT	P24298	496 aa		11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	HDLBP	Q00341	1268 aa	Known RBP	11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	EXOSC10	Q01780	885 aa	Known RBP	11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	PTPN12	Q05209	780 aa	Known RBP	11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	TBC1D1	Q86TI0	1168 aa	Predicted RBP	11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	TMEM139	Q8IV31	216 aa		11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	AMOTL1	Q8IY63	956 aa		11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	C8orf37	Q96NL8	207 aa		11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	FAM167B	Q9BTA0	163 aa		11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	NOC4L	Q9BVI4	516 aa	Known RBP	11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	PUS7L	Q9H0K6	701 aa	Known RBP	11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	GDA	Q9Y2T3	454 aa		11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	ADORA1	P30542	326 aa		11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	IFNAR2	P48551	515 aa		11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	ZMYM1	Q5SVZ6	1142 aa		11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	RASGRP2	Q7LDG7	609 aa		11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	CCDC51	Q96ER9	411 aa		11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	SENP2	Q9HC62	589 aa		11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	SEPT11	Q9NVA2	429 aa	Known RBP	11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	GGT7	Q9UJ14	662 aa		11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804		V9GY48	417 aa	Predicted RBP	11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	MPHOSPH10	O00566	681 aa	Known RBP	11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	USP5	P45974	858 aa		11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	TSGA10IP	Q3SY00	556 aa		11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	LDHAL6A	Q6ZMR3	332 aa		11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	IFNL2	Q8IZJ0	200 aa		11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	NACAP1	Q9BZK3	213 aa		11.62	□□□□□ -0.55
ITGA7-206	ENST00000553804	MED23	Q9ULK4	1368 aa		11.61	□□□□□ -0.55
ITGA7-206	ENST00000553804	ZNF142	P52746	1687 aa	Predicted RBP	11.61	□□□□□ -0.55
ITGA7-206	ENST00000553804	IGKV5-2	P06315	115 aa		11.61	□□□□□ -0.55
ITGA7-206	ENST00000553804	ERCC5	P28715	1186 aa	Predicted RBP	11.61	□□□□□ -0.55
ITGA7-206	ENST00000553804	CTNNA1	P35221	906 aa	Known RBP	11.61	□□□□□ -0.55
ITGA7-206	ENST00000553804	RNPC3	Q96LT9	517 aa	Known RBP	11.61	□□□□□ -0.55
ITGA7-206	ENST00000553804	CARD10	Q9BWT7	1032 aa		11.61	□□□□□ -0.55
ITGA7-206	ENST00000553804	PAK2	Q13177	524 aa		11.61	□□□□□ -0.55
ITGA7-206	ENST00000553804	OXER1	Q8TDS5	423 aa		11.61	□□□□□ -0.55
ITGA7-206	ENST00000553804	CCT8L2	Q96SF2	557 aa		11.61	□□□□□ -0.55
ITGA7-206	ENST00000553804	LRP2BP	Q9P2M1	347 aa		11.61	□□□□□ -0.55
ITGA7-206	ENST00000553804	CP	P00450	1065 aa		11.61	□□□□□ -0.55
ITGA7-206	ENST00000553804	GUCY1A2	P33402	732 aa		11.61	□□□□□ -0.55
ITGA7-206	ENST00000553804	IL15	P40933	162 aa	Predicted RBP	11.61	□□□□□ -0.55
ITGA7-206	ENST00000553804	ASIC1	P78348	528 aa		11.61	□□□□□ -0.55
ITGA7-206	ENST00000553804	USPL1	Q5W0Q7	1092 aa		11.61	□□□□□ -0.55
ITGA7-206	ENST00000553804	PIK3AP1	Q6ZUJ8	805 aa		11.61	□□□□□ -0.55
ITGA7-206	ENST00000553804	RRAGA	Q7L523	313 aa		11.61	□□□□□ -0.55
ITGA7-206	ENST00000553804	ADAT2	Q7Z6V5	191 aa	Known RBP	11.61	□□□□□ -0.55
ITGA7-206	ENST00000553804	OR2W6P	Q8NHA6	318 aa		11.61	□□□□□ -0.55
ITGA7-206	ENST00000553804	MGARP	Q8TDB4	240 aa		11.61	□□□□□ -0.55
ITGA7-206	ENST00000553804	SPATS2L	Q9NUQ6	558 aa	Known RBP	11.61	□□□□□ -0.55
ITGA7-206	ENST00000553804		A0A1B0GTH6	734 aa		11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	FAM205C	A6NFA0	338 aa		11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	LSP1	P33241	339 aa		11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	EPHB4	P54760	987 aa		11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	ZNF790	Q6PG37	636 aa		11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	ANKS4B	Q8N8V4	417 aa		11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	ZNF473	Q8WTR7	871 aa	Known RBP	11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	ZNF496	Q96IT1	587 aa	Predicted RBP	11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	MS4A14	Q96JA4	679 aa		11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	RPGRIP1	Q96KN7	1286 aa		11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	PPP1R12C	Q9BZL4	782 aa		11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	SLC40A1	Q9NP59	571 aa		11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	FTCD	O95954	541 aa		11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	PARP1	P09874	1014 aa	Known RBP	11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	SSR1	P43307	286 aa	Known RBP	11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	GSC	P56915	257 aa	Predicted RBP	11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	RASSF7	Q02833	373 aa		11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	NLRP14	Q86W24	1093 aa		11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	PARP9	Q8IXQ6	854 aa		11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	XAGE2	Q96GT9	111 aa		11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	CDK5RAP3	Q96JB5	506 aa		11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	ADD3	Q9UEY8	706 aa	Known RBP	11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	CD2AP	Q9Y5K6	639 aa		11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	RAD21	O60216	631 aa		11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	TMOD1	P28289	359 aa		11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	CCDC13	Q8IYE1	715 aa		11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	METTL22	Q9BUU2	404 aa	Predicted RBP	11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	HSD3B7	Q9H2F3	369 aa		11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	PEAK1	Q9H792	1746 aa		11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	USP42	Q9H9J4	1324 aa	Known RBP	11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	LUC7L	Q9NQ29	371 aa	Known RBP	11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	MYO1A	Q9UBC5	1043 aa		11.6	□□□□□ -0.55
ITGA7-206	ENST00000553804	XRN1	Q8IZH2	1706 aa	Known RBP	11.59	□□□□□ -0.55
ITGA7-206	ENST00000553804	ZMYM6	O95789	1325 aa		11.59	□□□□□ -0.55
ITGA7-206	ENST00000553804	PPP1R12A	O14974	1030 aa	Predicted RBP	11.59	□□□□□ -0.55

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