RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 PRDM1O75626 825 aa11.8□□□□□ -0.52
ACTN1-210ENST00000553779 NDUFB10O96000 172 aa11.8□□□□□ -0.52
ACTN1-210ENST00000553779 TSPY3P0CV98 308 aa11.8□□□□□ -0.52
ACTN1-210ENST00000553779 TSPY8P0CW00 308 aa11.8□□□□□ -0.52
ACTN1-210ENST00000553779 RASA1P20936 1047 aa11.8□□□□□ -0.52
ACTN1-210ENST00000553779 TLE2Q04725 743 aa11.8□□□□□ -0.52
ACTN1-210ENST00000553779 PDE4BQ07343 736 aa11.8□□□□□ -0.52
ACTN1-210ENST00000553779 GIMAP6Q6P9H5 292 aa11.8□□□□□ -0.52
ACTN1-210ENST00000553779 PRPF38AQ8NAV1 312 aaKnown RBP11.8□□□□□ -0.52
ACTN1-210ENST00000553779 NUP133Q8WUM0 1156 aa11.8□□□□□ -0.52
ACTN1-210ENST00000553779 LENG1Q96BZ8 264 aaPredicted RBP11.8□□□□□ -0.52
ACTN1-210ENST00000553779 RNPC3Q96LT9 517 aaKnown RBP11.8□□□□□ -0.52
ACTN1-210ENST00000553779 STRBPQ96SI9 672 aaKnown RBP11.8□□□□□ -0.52
ACTN1-210ENST00000553779 FSD1Q9BTV5 496 aa11.8□□□□□ -0.52
ACTN1-210ENST00000553779 STARD7Q9NQZ5 370 aa11.8□□□□□ -0.52
ACTN1-210ENST00000553779 HOMER2Q9NSB8 354 aa11.8□□□□□ -0.52
ACTN1-210ENST00000553779 ZNF214Q9UL59 606 aaPredicted RBP11.8□□□□□ -0.52
ACTN1-210ENST00000553779 PHF24Q9UPV7 400 aa11.8□□□□□ -0.52
ACTN1-210ENST00000553779 DIS3Q9Y2L1 958 aaKnown RBP11.8□□□□□ -0.52
ACTN1-210ENST00000553779 GBF1Q92538 1859 aa11.8□□□□□ -0.52
ACTN1-210ENST00000553779 PRUNE2Q8WUY3 3088 aa11.8□□□□□ -0.52
ACTN1-210ENST00000553779 ROBO3Q96MS0 1386 aa11.79□□□□□ -0.52
ACTN1-210ENST00000553779 A0A1W2PQ45 241 aaPredicted RBP11.79□□□□□ -0.52
ACTN1-210ENST00000553779 A0A1W2PQY0 241 aa11.79□□□□□ -0.52
ACTN1-210ENST00000553779 DCDC2CA8MYV0 355 aa11.79□□□□□ -0.52
ACTN1-210ENST00000553779 F5H6K3 240 aa11.79□□□□□ -0.52
ACTN1-210ENST00000553779 TTLL1O95922 423 aa11.79□□□□□ -0.52
ACTN1-210ENST00000553779 KLRC3Q07444 240 aa11.79□□□□□ -0.52
ACTN1-210ENST00000553779 SHHQ15465 462 aa11.79□□□□□ -0.52
ACTN1-210ENST00000553779 ZNF792Q3KQV3 632 aa11.79□□□□□ -0.52
ACTN1-210ENST00000553779 SBK1Q52WX2 424 aa11.79□□□□□ -0.52
ACTN1-210ENST00000553779 C20orf194Q5TEA3 1177 aa11.79□□□□□ -0.52
ACTN1-210ENST00000553779 NOL8Q76FK4 1167 aaKnown RBP11.79□□□□□ -0.52
ACTN1-210ENST00000553779 LRRC47Q8N1G4 583 aaKnown RBP11.79□□□□□ -0.52
ACTN1-210ENST00000553779 CHMP4CQ96CF2 233 aa11.79□□□□□ -0.52
ACTN1-210ENST00000553779 NAPBQ9H115 298 aa11.79□□□□□ -0.52
ACTN1-210ENST00000553779 TMEM39AQ9NV64 488 aa11.79□□□□□ -0.52
ACTN1-210ENST00000553779 NYAP2Q9P242 653 aa11.79□□□□□ -0.52
ACTN1-210ENST00000553779 FBXO40Q9UH90 709 aa11.79□□□□□ -0.52
ACTN1-210ENST00000553779 FEM1BQ9UK73 627 aa11.79□□□□□ -0.52
ACTN1-210ENST00000553779 FAM184BQ9ULE4 1060 aa11.79□□□□□ -0.52
ACTN1-210ENST00000553779 TACC3Q9Y6A5 838 aa11.79□□□□□ -0.52
ACTN1-210ENST00000553779 GSG1L2A8MUP6 293 aa11.78□□□□□ -0.52
ACTN1-210ENST00000553779 M0R2C6 588 aa11.78□□□□□ -0.52
ACTN1-210ENST00000553779 CENPBP07199 599 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-210ENST00000553779 C6orf222P0C671 652 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-210ENST00000553779 TAL1P17542 331 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-210ENST00000553779 FPGSQ05932 587 aa11.78□□□□□ -0.52
ACTN1-210ENST00000553779 SNX17Q15036 470 aa11.78□□□□□ -0.52
ACTN1-210ENST00000553779 PPP4R3BQ5MIZ7 849 aa11.78□□□□□ -0.52
ACTN1-210ENST00000553779 C9orf50Q5SZB4 431 aa11.78□□□□□ -0.52
ACTN1-210ENST00000553779 FAM109BQ6ICB4 259 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-210ENST00000553779 MSL3Q8N5Y2 521 aaKnown RBP11.78□□□□□ -0.52
ACTN1-210ENST00000553779 RAVER2Q9HCJ3 691 aaKnown RBP11.78□□□□□ -0.52
ACTN1-210ENST00000553779 ADAMTS5Q9UNA0 930 aa11.78□□□□□ -0.52
ACTN1-210ENST00000553779 SYNGAP1Q96PV0 1343 aa11.78□□□□□ -0.52
ACTN1-210ENST00000553779 SYNRGQ9UMZ2 1314 aa11.78□□□□□ -0.52
ACTN1-210ENST00000553779 LRRC37A2A6NM11 1700 aa11.77□□□□□ -0.52
ACTN1-210ENST00000553779 EYSQ5T1H1 3165 aa11.77□□□□□ -0.52
ACTN1-210ENST00000553779 TRIM43BA6NCK2 446 aa11.77□□□□□ -0.53
ACTN1-210ENST00000553779 IGHA2P01877 340 aa11.77□□□□□ -0.53
ACTN1-210ENST00000553779 ACLYP53396 1101 aa11.77□□□□□ -0.53
ACTN1-210ENST00000553779 SLFN13Q68D06 897 aa11.77□□□□□ -0.53
ACTN1-210ENST00000553779 CCDC174Q6PII3 467 aa11.77□□□□□ -0.53
ACTN1-210ENST00000553779 SH3RF1Q7Z6J0 888 aa11.77□□□□□ -0.53
ACTN1-210ENST00000553779 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.77□□□□□ -0.53
ACTN1-210ENST00000553779 PCSK9Q8NBP7 692 aaKnown RBP11.77□□□□□ -0.53
ACTN1-210ENST00000553779 OSBP2Q969R2 916 aa11.77□□□□□ -0.53
ACTN1-210ENST00000553779 TRIM43Q96BQ3 446 aaPredicted RBP11.77□□□□□ -0.53
ACTN1-210ENST00000553779 CEP95Q96GE4 821 aa11.77□□□□□ -0.53
ACTN1-210ENST00000553779 GLT1D1Q96MS3 346 aa11.77□□□□□ -0.53
ACTN1-210ENST00000553779 GUCD1Q96NT3 240 aa11.77□□□□□ -0.53
ACTN1-210ENST00000553779 MTMR7Q9Y216 660 aa11.77□□□□□ -0.53
ACTN1-210ENST00000553779 MROH7Q68CQ1 1323 aa11.77□□□□□ -0.53
ACTN1-210ENST00000553779 NCOR1O75376 2440 aa11.77□□□□□ -0.53
ACTN1-210ENST00000553779 TTC28Q96AY4 2481 aa11.76□□□□□ -0.53
ACTN1-210ENST00000553779 MOXD2PA6NHM9 499 aa11.76□□□□□ -0.53
ACTN1-210ENST00000553779 TSPY2A6NKD2 308 aa11.76□□□□□ -0.53
ACTN1-210ENST00000553779 TLR3O15455 904 aaKnown RBP11.76□□□□□ -0.53
ACTN1-210ENST00000553779 ZNF865P0CJ78 1059 aaPredicted RBP11.76□□□□□ -0.53
ACTN1-210ENST00000553779 BMP3P12645 472 aa11.76□□□□□ -0.53
ACTN1-210ENST00000553779 FOSL2P15408 326 aa11.76□□□□□ -0.53
ACTN1-210ENST00000553779 STAT2P52630 851 aa11.76□□□□□ -0.53
ACTN1-210ENST00000553779 C1orf53Q5VUE5 145 aa11.76□□□□□ -0.53
ACTN1-210ENST00000553779 CHST13Q8NET6 341 aa11.76□□□□□ -0.53
ACTN1-210ENST00000553779 REPS2Q8NFH8 660 aa11.76□□□□□ -0.53
ACTN1-210ENST00000553779 MAFAQ8NHW3 353 aaPredicted RBP11.76□□□□□ -0.53
ACTN1-210ENST00000553779 TSEN34Q9BSV6 310 aaKnown RBP11.76□□□□□ -0.53
ACTN1-210ENST00000553779 DCTPP1Q9H773 170 aa11.76□□□□□ -0.53
ACTN1-210ENST00000553779 ACAD9Q9H845 621 aa11.76□□□□□ -0.53
ACTN1-210ENST00000553779 EPB41L4AQ9HCS5 686 aaPredicted RBP11.76□□□□□ -0.53
ACTN1-210ENST00000553779 TOMM22Q9NS69 142 aa11.76□□□□□ -0.53
ACTN1-210ENST00000553779 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.76□□□□□ -0.53
ACTN1-210ENST00000553779 STX8Q9UNK0 236 aa11.76□□□□□ -0.53
ACTN1-210ENST00000553779 TTC41PQ6P2S7 1318 aa11.76□□□□□ -0.53
ACTN1-210ENST00000553779 PATL2C9JE40 543 aaKnown RBP11.75□□□□□ -0.53
ACTN1-210ENST00000553779 TMEM232C9JQI7 657 aa11.75□□□□□ -0.53
ACTN1-210ENST00000553779 POTEB2H3BUK9 544 aa11.75□□□□□ -0.53
ACTN1-210ENST00000553779 DUSP11O75319 330 aaKnown RBP11.75□□□□□ -0.53
ACTN1-210ENST00000553779 SLC1A4P43007 532 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms