RNA–Protein interactions for RNA: ENST00000550692.1

BRF1-218, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-218ENST00000550692 RIOX2Q8IUF8 465 aa13.26□□□□□ -0.29
BRF1-218ENST00000550692 U2AF1L4Q8WU68 220 aaKnown RBP13.26□□□□□ -0.29
BRF1-218ENST00000550692 ESR2Q92731 530 aa13.26□□□□□ -0.29
BRF1-218ENST00000550692 GMCL1Q96IK5 515 aa13.26□□□□□ -0.29
BRF1-218ENST00000550692 DEFB118Q96PH6 123 aa13.26□□□□□ -0.29
BRF1-218ENST00000550692 TMEM47Q9BQJ4 181 aa13.26□□□□□ -0.29
BRF1-218ENST00000550692 ZKSCAN3Q9BRR0 538 aa13.26□□□□□ -0.29
BRF1-218ENST00000550692 FLRT1Q9NZU1 646 aa13.26□□□□□ -0.29
BRF1-218ENST00000550692 FEM1BQ9UK73 627 aa13.26□□□□□ -0.29
BRF1-218ENST00000550692 RPTORQ8N122 1335 aa13.25□□□□□ -0.29
BRF1-218ENST00000550692 COBLO75128 1261 aa13.25□□□□□ -0.29
BRF1-218ENST00000550692 KDM4AO75164 1064 aa13.25□□□□□ -0.29
BRF1-218ENST00000550692 SGPL1O95470 568 aa13.25□□□□□ -0.29
BRF1-218ENST00000550692 HOXC6P09630 235 aa13.25□□□□□ -0.29
BRF1-218ENST00000550692 TOP1P11387 765 aaKnown RBP13.25□□□□□ -0.29
BRF1-218ENST00000550692 PRKAR2AP13861 404 aaKnown RBP13.25□□□□□ -0.29
BRF1-218ENST00000550692 CACNB2Q08289 660 aaPredicted RBP13.25□□□□□ -0.29
BRF1-218ENST00000550692 MAP3K21Q5TCX8 1036 aa13.25□□□□□ -0.29
BRF1-218ENST00000550692 CASC1Q6TDU7 716 aa13.25□□□□□ -0.29
BRF1-218ENST00000550692 DPP9Q86TI2 863 aa13.25□□□□□ -0.29
BRF1-218ENST00000550692 TRMT44Q8IYL2 757 aaKnown RBP13.25□□□□□ -0.29
BRF1-218ENST00000550692 CPXCR1Q8N123 301 aa13.25□□□□□ -0.29
BRF1-218ENST00000550692 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.25□□□□□ -0.29
BRF1-218ENST00000550692 PAK6Q9NQU5 681 aaPredicted RBP13.25□□□□□ -0.29
BRF1-218ENST00000550692 RIPK3Q9Y572 518 aa13.25□□□□□ -0.29
BRF1-218ENST00000550692 ZNFX1Q9P2E3 1918 aaKnown RBP13.24□□□□□ -0.29
BRF1-218ENST00000550692 ZBED4O75132 1171 aa13.24□□□□□ -0.29
BRF1-218ENST00000550692 CDC45O75419 566 aa13.24□□□□□ -0.29
BRF1-218ENST00000550692 SLC4A3P48751 1232 aa13.24□□□□□ -0.29
BRF1-218ENST00000550692 STAT2P52630 851 aa13.24□□□□□ -0.29
BRF1-218ENST00000550692 SNRNP48Q6IEG0 339 aaKnown RBP13.24□□□□□ -0.29
BRF1-218ENST00000550692 CHURC1Q8WUH1 139 aa13.24□□□□□ -0.29
BRF1-218ENST00000550692 TTC14Q96N46 770 aa13.24□□□□□ -0.29
BRF1-218ENST00000550692 TEX13BQ9BXU2 312 aa13.24□□□□□ -0.29
BRF1-218ENST00000550692 SLC38A10Q9HBR0 1119 aa13.24□□□□□ -0.29
BRF1-218ENST00000550692 RAVER2Q9HCJ3 691 aaKnown RBP13.24□□□□□ -0.29
BRF1-218ENST00000550692 HMX1Q9NP08 348 aaPredicted RBP13.24□□□□□ -0.29
BRF1-218ENST00000550692 CTDP1Q9Y5B0 961 aaPredicted RBP13.24□□□□□ -0.29
BRF1-218ENST00000550692 ATP2A1O14983 1001 aa13.23□□□□□ -0.29
BRF1-218ENST00000550692 PLA2G6O60733 806 aa13.23□□□□□ -0.29
BRF1-218ENST00000550692 EIF5BO60841 1220 aaKnown RBP13.23□□□□□ -0.29
BRF1-218ENST00000550692 CYP21A2P08686 494 aa13.23□□□□□ -0.29
BRF1-218ENST00000550692 FCER1AP12319 257 aa13.23□□□□□ -0.29
BRF1-218ENST00000550692 IKQ13123 557 aaPredicted RBP13.23□□□□□ -0.29
BRF1-218ENST00000550692 CCDC96Q2M329 555 aa13.23□□□□□ -0.29
BRF1-218ENST00000550692 TTBK2Q6IQ55 1244 aa13.23□□□□□ -0.29
BRF1-218ENST00000550692 FAM160B2Q86V87 743 aa13.23□□□□□ -0.29
BRF1-218ENST00000550692 DGKHQ86XP1 1220 aa13.23□□□□□ -0.29
BRF1-218ENST00000550692 ABRAQ8N0Z2 381 aa13.23□□□□□ -0.29
BRF1-218ENST00000550692 DCAF4Q8WV16 495 aa13.23□□□□□ -0.29
BRF1-218ENST00000550692 MMP19Q99542 508 aa13.23□□□□□ -0.29
BRF1-218ENST00000550692 KRT23Q9C075 422 aa13.23□□□□□ -0.29
BRF1-218ENST00000550692 ZSWIM5Q9P217 1185 aa13.23□□□□□ -0.29
BRF1-218ENST00000550692 TAF6LQ9Y6J9 622 aa13.23□□□□□ -0.29
BRF1-218ENST00000550692 U3KPZ7 1027 aaPredicted RBP13.23□□□□□ -0.29
BRF1-218ENST00000550692 ZNF236Q9UL36 1845 aa13.23□□□□□ -0.29
BRF1-218ENST00000550692 FRMPD2Q68DX3 1309 aaPredicted RBP13.22□□□□□ -0.29
BRF1-218ENST00000550692 IGHA2P01877 340 aa13.22□□□□□ -0.29
BRF1-218ENST00000550692 TFRCP02786 760 aaKnown RBP13.22□□□□□ -0.29
BRF1-218ENST00000550692 PGK2P07205 417 aa13.22□□□□□ -0.29
BRF1-218ENST00000550692 PDHBP11177 359 aa13.22□□□□□ -0.29
BRF1-218ENST00000550692 CCND3P30281 292 aaPredicted RBP13.22□□□□□ -0.29
BRF1-218ENST00000550692 CYP2C19P33261 490 aa13.22□□□□□ -0.29
BRF1-218ENST00000550692 COPB2P35606 906 aa13.22□□□□□ -0.29
BRF1-218ENST00000550692 NT5C2P49902 561 aa13.22□□□□□ -0.29
BRF1-218ENST00000550692 SNAP25P60880 206 aa13.22□□□□□ -0.29
BRF1-218ENST00000550692 MFSD14CQ5VZR4 134 aa13.22□□□□□ -0.29
BRF1-218ENST00000550692 IQCA1Q86XH1 822 aa13.22□□□□□ -0.29
BRF1-218ENST00000550692 MAP4K1Q92918 833 aa13.22□□□□□ -0.29
BRF1-218ENST00000550692 ZSCAN10Q96SZ4 725 aaPredicted RBP13.22□□□□□ -0.29
BRF1-218ENST00000550692 ESYT1Q9BSJ8 1104 aa13.22□□□□□ -0.29
BRF1-218ENST00000550692 CRISPLD2Q9H0B8 497 aa13.22□□□□□ -0.29
BRF1-218ENST00000550692 CNNM2Q9H8M5 875 aa13.22□□□□□ -0.29
BRF1-218ENST00000550692 GPCPD1Q9NPB8 672 aa13.22□□□□□ -0.29
BRF1-218ENST00000550692 PRR12Q9ULL5 1215 aa13.22□□□□□ -0.29
BRF1-218ENST00000550692 ZNF536O15090 1300 aa13.21□□□□□ -0.29
BRF1-218ENST00000550692 FDX1P10109 184 aa13.21□□□□□ -0.29
BRF1-218ENST00000550692 SLC16A2P36021 539 aa13.21□□□□□ -0.29
BRF1-218ENST00000550692 OAZ1P54368 228 aa13.21□□□□□ -0.29
BRF1-218ENST00000550692 KCTD2Q14681 263 aa13.21□□□□□ -0.29
BRF1-218ENST00000550692 CYB5R4Q7L1T6 521 aa13.21□□□□□ -0.29
BRF1-218ENST00000550692 ANKS1AQ92625 1134 aa13.21□□□□□ -0.29
BRF1-218ENST00000550692 AGBL1Q96MI9 1066 aa13.21□□□□□ -0.29
BRF1-218ENST00000550692 SLC5A4Q9NY91 659 aa13.21□□□□□ -0.29
BRF1-218ENST00000550692 RBM8AQ9Y5S9 174 aaKnown RBP13.21□□□□□ -0.29
BRF1-218ENST00000550692 TNKSO95271 1327 aa13.2□□□□□ -0.3
BRF1-218ENST00000550692 FARP2O94887 1054 aaPredicted RBP13.2□□□□□ -0.3
BRF1-218ENST00000550692 SNHG28P0DPA3 235 aa13.2□□□□□ -0.3
BRF1-218ENST00000550692 ZNF543Q08ER8 600 aa13.2□□□□□ -0.3
BRF1-218ENST00000550692 ZNF792Q3KQV3 632 aa13.2□□□□□ -0.3
BRF1-218ENST00000550692 CCDC178Q5BJE1 867 aa13.2□□□□□ -0.3
BRF1-218ENST00000550692 OLFML2BQ68BL8 750 aa13.2□□□□□ -0.3
BRF1-218ENST00000550692 CCDC174Q6PII3 467 aa13.2□□□□□ -0.3
BRF1-218ENST00000550692 BTNL9Q6UXG8 535 aa13.2□□□□□ -0.3
BRF1-218ENST00000550692 KIAA1211Q6ZU35 1233 aa13.2□□□□□ -0.3
BRF1-218ENST00000550692 STOX1Q6ZVD7 989 aa13.2□□□□□ -0.3
BRF1-218ENST00000550692 UBE2Q1Q7Z7E8 422 aa13.2□□□□□ -0.3
BRF1-218ENST00000550692 ENAHQ8N8S7 591 aaPredicted RBP13.2□□□□□ -0.3
BRF1-218ENST00000550692 PNMA1Q8ND90 353 aa13.2□□□□□ -0.3
BRF1-218ENST00000550692 TRPV1Q8NER1 839 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms