RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 FGRP09769 529 aa23.62■■□□□ 1.37
GCN1-207ENST00000550471 STAT2P52630 851 aa23.61■■□□□ 1.37
GCN1-207ENST00000550471 SNRNP48Q6IEG0 339 aaKnown RBP23.61■■□□□ 1.37
GCN1-207ENST00000550471 CHST13Q8NET6 341 aa23.61■■□□□ 1.37
GCN1-207ENST00000550471 SLC38A10Q9HBR0 1119 aa23.61■■□□□ 1.37
GCN1-207ENST00000550471 SLC1A4P43007 532 aa23.6■■□□□ 1.37
GCN1-207ENST00000550471 FAM47AQ5JRC9 791 aa23.6■■□□□ 1.37
GCN1-207ENST00000550471 CCDC129Q6ZRS4 1044 aa23.6■■□□□ 1.37
GCN1-207ENST00000550471 RILPL2Q969X0 211 aa23.6■■□□□ 1.37
GCN1-207ENST00000550471 DDX11Q96FC9 970 aa23.6■■□□□ 1.37
GCN1-207ENST00000550471 NUP88Q99567 741 aaPredicted RBP23.6■■□□□ 1.37
GCN1-207ENST00000550471 STX8Q9UNK0 236 aa23.6■■□□□ 1.37
GCN1-207ENST00000550471 CCDC171Q6TFL3 1326 aa23.59■■□□□ 1.37
GCN1-207ENST00000550471 HSPD1P10809 573 aaKnown RBP23.59■■□□□ 1.37
GCN1-207ENST00000550471 ZNF792Q3KQV3 632 aa23.59■■□□□ 1.37
GCN1-207ENST00000550471 TKFCQ3LXA3 575 aa23.59■■□□□ 1.37
GCN1-207ENST00000550471 RCSD1Q6JBY9 416 aa23.59■■□□□ 1.37
GCN1-207ENST00000550471 B4GALNT3Q6L9W6 998 aa23.59■■□□□ 1.37
GCN1-207ENST00000550471 PLEKHM2Q8IWE5 1019 aa23.59■■□□□ 1.37
GCN1-207ENST00000550471 EXOC6Q8TAG9 804 aa23.59■■□□□ 1.37
GCN1-207ENST00000550471 STAG1Q8WVM7 1258 aa23.59■■□□□ 1.37
GCN1-207ENST00000550471 KIFC2Q96AC6 838 aa23.59■■□□□ 1.37
GCN1-207ENST00000550471 TINF2Q9BSI4 451 aa23.59■■□□□ 1.37
GCN1-207ENST00000550471 RNF41Q9H4P4 317 aaPredicted RBP23.59■■□□□ 1.37
GCN1-207ENST00000550471 MYH4Q9Y623 1939 aa23.59■■□□□ 1.37
GCN1-207ENST00000550471 KBTBD13C9JR72 458 aa23.58■■□□□ 1.37
GCN1-207ENST00000550471 FOXP2O15409 715 aa23.58■■□□□ 1.37
GCN1-207ENST00000550471 RANBP6O60518 1105 aaKnown RBP23.58■■□□□ 1.37
GCN1-207ENST00000550471 FGAP02671 866 aa23.58■■□□□ 1.37
GCN1-207ENST00000550471 BMP8BP34820 402 aa23.58■■□□□ 1.37
GCN1-207ENST00000550471 NOVP48745 357 aa23.58■■□□□ 1.37
GCN1-207ENST00000550471 ZNF467Q7Z7K2 595 aaPredicted RBP23.58■■□□□ 1.37
GCN1-207ENST00000550471 LRRC47Q8N1G4 583 aaKnown RBP23.58■■□□□ 1.37
GCN1-207ENST00000550471 PRO3102Q9H379 93 aa23.58■■□□□ 1.37
GCN1-207ENST00000550471 TCP11L1Q9NUJ3 509 aa23.58■■□□□ 1.37
GCN1-207ENST00000550471 PNMA2Q9UL42 364 aa23.58■■□□□ 1.37
GCN1-207ENST00000550471 CNPY2Q9Y2B0 182 aa23.58■■□□□ 1.37
GCN1-207ENST00000550471 PFASO15067 1338 aa23.58■■□□□ 1.36
GCN1-207ENST00000550471 A0A0D9SFI3 127 aa23.57■■□□□ 1.36
GCN1-207ENST00000550471 SDSP20132 328 aa23.57■■□□□ 1.36
GCN1-207ENST00000550471 FXR1P51114 621 aaKnown RBP eCLIP23.57■■□□□ 1.36
GCN1-207ENST00000550471 CTDSPL2Q05D32 466 aa23.57■■□□□ 1.36
GCN1-207ENST00000550471 C7orf61Q8IZ16 206 aa23.57■■□□□ 1.36
GCN1-207ENST00000550471 FAM227BQ96M60 508 aa23.57■■□□□ 1.36
GCN1-207ENST00000550471 RBM27Q9P2N5 1060 aaKnown RBP23.57■■□□□ 1.36
GCN1-207ENST00000550471 SYNGAP1Q96PV0 1343 aa23.57■■□□□ 1.36
GCN1-207ENST00000550471 TMEM232C9JQI7 657 aa23.56■■□□□ 1.36
GCN1-207ENST00000550471 IGHDP01880 384 aa23.56■■□□□ 1.36
GCN1-207ENST00000550471 IKQ13123 557 aaPredicted RBP23.56■■□□□ 1.36
GCN1-207ENST00000550471 NMIQ13287 307 aaPredicted RBP23.56■■□□□ 1.36
GCN1-207ENST00000550471 VPS53Q5VIR6 699 aa23.56■■□□□ 1.36
GCN1-207ENST00000550471 TRPV1Q8NER1 839 aa23.56■■□□□ 1.36
GCN1-207ENST00000550471 TTC14Q96N46 770 aa23.56■■□□□ 1.36
GCN1-207ENST00000550471 DIAPH3Q9NSV4 1193 aa23.56■■□□□ 1.36
GCN1-207ENST00000550471 COL11A1P12107 1806 aaPredicted RBP23.55■■□□□ 1.36
GCN1-207ENST00000550471 RARBP10826 455 aa23.55■■□□□ 1.36
GCN1-207ENST00000550471 CCDC178Q5BJE1 867 aa23.55■■□□□ 1.36
GCN1-207ENST00000550471 MAMDC4Q6UXC1 1216 aa23.55■■□□□ 1.36
GCN1-207ENST00000550471 CPXCR1Q8N123 301 aa23.55■■□□□ 1.36
GCN1-207ENST00000550471 DCAF4Q8WV16 495 aa23.55■■□□□ 1.36
GCN1-207ENST00000550471 TOMM22Q9NS69 142 aa23.55■■□□□ 1.36
GCN1-207ENST00000550471 ISY1Q9ULR0 285 aaKnown RBP23.55■■□□□ 1.36
GCN1-207ENST00000550471 DNAJC25-GNG10A0A024R161 153 aa23.54■■□□□ 1.36
GCN1-207ENST00000550471 PGK2P07205 417 aa23.54■■□□□ 1.36
GCN1-207ENST00000550471 TOP1P11387 765 aaKnown RBP23.54■■□□□ 1.36
GCN1-207ENST00000550471 AKR1A1P14550 325 aa23.54■■□□□ 1.36
GCN1-207ENST00000550471 MFSD6Q6ZSS7 791 aa23.54■■□□□ 1.36
GCN1-207ENST00000550471 ANKRD35Q8N283 1001 aa23.54■■□□□ 1.36
GCN1-207ENST00000550471 SENP6Q9GZR1 1112 aaPredicted RBP23.54■■□□□ 1.36
GCN1-207ENST00000550471 IL17RBQ9NRM6 502 aa23.54■■□□□ 1.36
GCN1-207ENST00000550471 SUPT16HQ9Y5B9 1047 aaKnown RBP23.54■■□□□ 1.36
GCN1-207ENST00000550471 MCCP23508 829 aa23.53■■□□□ 1.36
GCN1-207ENST00000550471 AKNAD1Q5T1N1 836 aa23.53■■□□□ 1.36
GCN1-207ENST00000550471 RNF180Q86T96 592 aa23.53■■□□□ 1.36
GCN1-207ENST00000550471 ACAD9Q9H845 621 aa23.53■■□□□ 1.36
GCN1-207ENST00000550471 RAVER2Q9HCJ3 691 aaKnown RBP23.53■■□□□ 1.36
GCN1-207ENST00000550471 CTNNA3Q9UI47 895 aa23.53■■□□□ 1.36
GCN1-207ENST00000550471 ZNFX1Q9P2E3 1918 aaKnown RBP23.53■■□□□ 1.36
GCN1-207ENST00000550471 ESR2Q92731 530 aa23.52■■□□□ 1.36
GCN1-207ENST00000550471 GDF15Q99988 308 aa23.52■■□□□ 1.36
GCN1-207ENST00000550471 ZNF213O14771 459 aa23.51■■□□□ 1.35
GCN1-207ENST00000550471 C1orf53Q5VUE5 145 aa23.51■■□□□ 1.35
GCN1-207ENST00000550471 ZNF589Q86UQ0 364 aaPredicted RBP23.51■■□□□ 1.35
GCN1-207ENST00000550471 PRKAG2Q9UGJ0 569 aa23.51■■□□□ 1.35
GCN1-207ENST00000550471 FAM184BQ9ULE4 1060 aa23.51■■□□□ 1.35
GCN1-207ENST00000550471 RIPK3Q9Y572 518 aa23.51■■□□□ 1.35
GCN1-207ENST00000550471 TRIOBPQ9H2D6 2365 aa23.5■■□□□ 1.35
GCN1-207ENST00000550471 FRMPD3Q5JV73 1810 aa23.5■■□□□ 1.35
GCN1-207ENST00000550471 LRRC26Q2I0M4 334 aa23.5■■□□□ 1.35
GCN1-207ENST00000550471 RRP12Q5JTH9 1297 aaKnown RBP23.5■■□□□ 1.35
GCN1-207ENST00000550471 DSCC1Q9BVC3 393 aa23.5■■□□□ 1.35
GCN1-207ENST00000550471 ABHD16BQ9H3Z7 469 aa23.5■■□□□ 1.35
GCN1-207ENST00000550471 XPNPEP3Q9NQH7 507 aa23.5■■□□□ 1.35
GCN1-207ENST00000550471 ZNF865P0CJ78 1059 aaPredicted RBP23.49■■□□□ 1.35
GCN1-207ENST00000550471 LRRC41Q15345 812 aa23.49■■□□□ 1.35
GCN1-207ENST00000550471 PRAMEF19Q5SWL8 479 aa23.49■■□□□ 1.35
GCN1-207ENST00000550471 BTNL9Q6UXG8 535 aa23.49■■□□□ 1.35
GCN1-207ENST00000550471 TSEN34Q9BSV6 310 aaKnown RBP23.49■■□□□ 1.35
GCN1-207ENST00000550471 ZMYND8Q9ULU4 1186 aaPredicted RBP23.49■■□□□ 1.35
GCN1-207ENST00000550471 SLC4A3P48751 1232 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms