RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 CDCP2Q5VXM1 449 aa7.63□□□□□ -1.19
CCDC38-208ENST00000549876 FBXL19Q6PCT2 694 aa7.63□□□□□ -1.19
CCDC38-208ENST00000549876 TMEFF1Q8IYR6 380 aa7.63□□□□□ -1.19
CCDC38-208ENST00000549876 CXorf38Q8TB03 319 aa7.63□□□□□ -1.19
CCDC38-208ENST00000549876 JAG2Q9Y219 1238 aa7.63□□□□□ -1.19
CCDC38-208ENST00000549876 SSU72P8A0A1W2PR75 194 aa7.62□□□□□ -1.19
CCDC38-208ENST00000549876 FADS2P1A8MWK0 482 aa7.62□□□□□ -1.19
CCDC38-208ENST00000549876 SIGLEC6O43699 453 aa7.62□□□□□ -1.19
CCDC38-208ENST00000549876 FKTNO75072 461 aa7.62□□□□□ -1.19
CCDC38-208ENST00000549876 CDR1P51861 262 aa7.62□□□□□ -1.19
CCDC38-208ENST00000549876 RTP1P59025 263 aa7.62□□□□□ -1.19
CCDC38-208ENST00000549876 CCDC27Q2M243 656 aa7.62□□□□□ -1.19
CCDC38-208ENST00000549876 CWF19L2Q2TBE0 894 aaKnown RBP7.62□□□□□ -1.19
CCDC38-208ENST00000549876 ERMP1Q7Z2K6 904 aa7.62□□□□□ -1.19
CCDC38-208ENST00000549876 FCRL2Q96LA5 508 aaPredicted RBP7.62□□□□□ -1.19
CCDC38-208ENST00000549876 BRMS1Q9HCU9 246 aa7.62□□□□□ -1.19
CCDC38-208ENST00000549876 KBTBD4Q9NVX7 518 aa7.62□□□□□ -1.19
CCDC38-208ENST00000549876 TNFRSF10DQ9UBN6 386 aa7.62□□□□□ -1.19
CCDC38-208ENST00000549876 PCDHB14Q9Y5E9 798 aa7.62□□□□□ -1.19
CCDC38-208ENST00000549876 OTOL1A6NHN0 477 aaPredicted RBP7.61□□□□□ -1.19
CCDC38-208ENST00000549876 ABLIM1O14639 778 aa7.61□□□□□ -1.19
CCDC38-208ENST00000549876 GREM1O60565 184 aa7.61□□□□□ -1.19
CCDC38-208ENST00000549876 POLR2BP30876 1174 aaKnown RBP7.61□□□□□ -1.19
CCDC38-208ENST00000549876 CEBPAP49715 358 aaPredicted RBP7.61□□□□□ -1.19
CCDC38-208ENST00000549876 RAD51AP2Q09MP3 1159 aa7.61□□□□□ -1.19
CCDC38-208ENST00000549876 KIR3DS1Q14943 382 aa7.61□□□□□ -1.19
CCDC38-208ENST00000549876 OVOS1Q6IE37 1185 aa7.61□□□□□ -1.19
CCDC38-208ENST00000549876 MZB1Q8WU39 189 aa7.61□□□□□ -1.19
CCDC38-208ENST00000549876 PRDM14Q9GZV8 571 aa7.61□□□□□ -1.19
CCDC38-208ENST00000549876 CNNM2Q9H8M5 875 aa7.61□□□□□ -1.19
CCDC38-208ENST00000549876 KLHL14Q9P2G3 628 aa7.61□□□□□ -1.19
CCDC38-208ENST00000549876 MINPP1Q9UNW1 487 aa7.61□□□□□ -1.19
CCDC38-208ENST00000549876 SASH1O94885 1247 aa7.6□□□□□ -1.19
CCDC38-208ENST00000549876 ERCC3P19447 782 aa7.6□□□□□ -1.19
CCDC38-208ENST00000549876 HSF5Q4G112 596 aaPredicted RBP7.6□□□□□ -1.19
CCDC38-208ENST00000549876 GALNT18Q6P9A2 607 aa7.6□□□□□ -1.19
CCDC38-208ENST00000549876 EHMT1Q9H9B1 1298 aa7.6□□□□□ -1.19
CCDC38-208ENST00000549876 COPRSQ9NQ92 184 aa7.6□□□□□ -1.19
CCDC38-208ENST00000549876 VTI1BQ9UEU0 232 aa7.6□□□□□ -1.19
CCDC38-208ENST00000549876 KRTAP10-2P60368 255 aa7.59□□□□□ -1.19
CCDC38-208ENST00000549876 SKOR2Q2VWA4 1001 aaPredicted RBP7.59□□□□□ -1.19
CCDC38-208ENST00000549876 OLFML2BQ68BL8 750 aa7.59□□□□□ -1.19
CCDC38-208ENST00000549876 FAM129CQ86XR2 697 aa7.59□□□□□ -1.19
CCDC38-208ENST00000549876 IGDCC3Q8IVU1 814 aa7.59□□□□□ -1.19
CCDC38-208ENST00000549876 ATG4CQ96DT6 458 aa7.59□□□□□ -1.19
CCDC38-208ENST00000549876 WTIPA6NIX2 430 aaPredicted RBP7.58□□□□□ -1.2
CCDC38-208ENST00000549876 MPOP05164 745 aa7.58□□□□□ -1.2
CCDC38-208ENST00000549876 CCNFP41002 786 aa7.58□□□□□ -1.2
CCDC38-208ENST00000549876 SLCO6A1Q86UG4 719 aa7.58□□□□□ -1.2
CCDC38-208ENST00000549876 MRS2Q9HD23 443 aa7.58□□□□□ -1.2
CCDC38-208ENST00000549876 CHST7Q9NS84 486 aa7.58□□□□□ -1.2
CCDC38-208ENST00000549876 ERVK13-1Q9NX77 482 aa7.58□□□□□ -1.2
CCDC38-208ENST00000549876 GPR55Q9Y2T6 319 aaPredicted RBP7.58□□□□□ -1.2
CCDC38-208ENST00000549876 SUPT16HQ9Y5B9 1047 aaKnown RBP7.58□□□□□ -1.2
CCDC38-208ENST00000549876 CLEC3AO75596 197 aa7.57□□□□□ -1.2
CCDC38-208ENST00000549876 ZNF205O95201 554 aa7.57□□□□□ -1.2
CCDC38-208ENST00000549876 EIF4A3P38919 411 aaKnown RBP7.57□□□□□ -1.2
CCDC38-208ENST00000549876 CTSKP43235 329 aa7.57□□□□□ -1.2
CCDC38-208ENST00000549876 CRKP46108 304 aa7.57□□□□□ -1.2
CCDC38-208ENST00000549876 LAPTM5Q13571 262 aa7.57□□□□□ -1.2
CCDC38-208ENST00000549876 VMACQ2NL98 169 aa7.57□□□□□ -1.2
CCDC38-208ENST00000549876 CNKSR3Q6P9H4 555 aa7.57□□□□□ -1.2
CCDC38-208ENST00000549876 LDHDQ86WU2 507 aa7.57□□□□□ -1.2
CCDC38-208ENST00000549876 FEZF2Q8TBJ5 459 aa7.57□□□□□ -1.2
CCDC38-208ENST00000549876 ZNF512BQ96KM6 892 aaPredicted RBP7.57□□□□□ -1.2
CCDC38-208ENST00000549876 ACSL6Q9UKU0 697 aa7.57□□□□□ -1.2
CCDC38-208ENST00000549876 TAF6LQ9Y6J9 622 aa7.57□□□□□ -1.2
CCDC38-208ENST00000549876 ENDOUP21128 410 aaKnown RBP7.56□□□□□ -1.2
CCDC38-208ENST00000549876 ARL4AP40617 200 aa7.56□□□□□ -1.2
CCDC38-208ENST00000549876 CBX2Q14781 532 aaPredicted RBP7.56□□□□□ -1.2
CCDC38-208ENST00000549876 NLRC3Q7RTR2 1065 aa7.56□□□□□ -1.2
CCDC38-208ENST00000549876 TMEM192Q8IY95 271 aa7.56□□□□□ -1.2
CCDC38-208ENST00000549876 TNFRSF12AQ9NP84 129 aa7.56□□□□□ -1.2
CCDC38-208ENST00000549876 PCDHA5Q9Y5H7 936 aa7.56□□□□□ -1.2
CCDC38-208ENST00000549876 A0A1W2PQ45 241 aaPredicted RBP7.55□□□□□ -1.2
CCDC38-208ENST00000549876 A0A1W2PQY0 241 aa7.55□□□□□ -1.2
CCDC38-208ENST00000549876 PRKCAP17252 672 aa7.55□□□□□ -1.2
CCDC38-208ENST00000549876 BMP8BP34820 402 aa7.55□□□□□ -1.2
CCDC38-208ENST00000549876 CLCQ05315 142 aa7.55□□□□□ -1.2
CCDC38-208ENST00000549876 TMC6Q7Z403 805 aa7.55□□□□□ -1.2
CCDC38-208ENST00000549876 ZNF296Q8WUU4 475 aaPredicted RBP7.55□□□□□ -1.2
CCDC38-208ENST00000549876 CYP4F8P98187 520 aa7.54□□□□□ -1.2
CCDC38-208ENST00000549876 TMEM62Q0P6H9 643 aa7.54□□□□□ -1.2
CCDC38-208ENST00000549876 RAB3GAP1Q15042 981 aa7.54□□□□□ -1.2
CCDC38-208ENST00000549876 SP8Q8IXZ3 490 aa7.54□□□□□ -1.2
CCDC38-208ENST00000549876 REXO1Q8N1G1 1221 aaKnown RBP7.54□□□□□ -1.2
CCDC38-208ENST00000549876 LINC01356Q8N9X3 169 aa7.54□□□□□ -1.2
CCDC38-208ENST00000549876 TP53I13Q8NBR0 393 aaPredicted RBP7.54□□□□□ -1.2
CCDC38-208ENST00000549876 SYT8Q8NBV8 401 aa7.54□□□□□ -1.2
CCDC38-208ENST00000549876 TMEM52Q8NDY8 209 aa7.54□□□□□ -1.2
CCDC38-208ENST00000549876 LUC7LQ9NQ29 371 aaKnown RBP7.54□□□□□ -1.2
CCDC38-208ENST00000549876 GFOD1Q9NXC2 390 aa7.54□□□□□ -1.2
CCDC38-208ENST00000549876 MEIS3P2A8K0S8 358 aa7.53□□□□□ -1.2
CCDC38-208ENST00000549876 TNFRSF10CO14798 259 aa7.53□□□□□ -1.2
CCDC38-208ENST00000549876 VAV1P15498 845 aa7.53□□□□□ -1.2
CCDC38-208ENST00000549876 NME1P15531 152 aaKnown RBP7.53□□□□□ -1.2
CCDC38-208ENST00000549876 NFKB2Q00653 900 aa7.53□□□□□ -1.2
CCDC38-208ENST00000549876 DBX2Q6ZNG2 339 aa7.53□□□□□ -1.2
CCDC38-208ENST00000549876 ANTXR1Q9H6X2 564 aa7.53□□□□□ -1.2
CCDC38-208ENST00000549876 PRR13Q9NZ81 148 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms