RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 CTSKP43235 329 aa6.02□□□□□ -1.45
PTCH1-216ENST00000548379 POMZP3Q6PJE2 187 aa6.02□□□□□ -1.45
PTCH1-216ENST00000548379 ADAT2Q7Z6V5 191 aaKnown RBP6.02□□□□□ -1.45
PTCH1-216ENST00000548379 ZDHHC13Q8IUH4 622 aa6.02□□□□□ -1.45
PTCH1-216ENST00000548379 SPACA3Q8IXA5 215 aa6.02□□□□□ -1.45
PTCH1-216ENST00000548379 FIBCD1Q8N539 461 aa6.02□□□□□ -1.45
PTCH1-216ENST00000548379 DAGLBQ8NCG7 672 aa6.02□□□□□ -1.45
PTCH1-216ENST00000548379 ADCY4Q8NFM4 1077 aa6.02□□□□□ -1.45
PTCH1-216ENST00000548379 BRF1Q92994 677 aa6.02□□□□□ -1.45
PTCH1-216ENST00000548379 EXOC2Q96KP1 924 aa6.02□□□□□ -1.45
PTCH1-216ENST00000548379 SPOCK3Q9BQ16 436 aa6.02□□□□□ -1.45
PTCH1-216ENST00000548379 AARSD1Q9BTE6 412 aaKnown RBP6.02□□□□□ -1.45
PTCH1-216ENST00000548379 CHST7Q9NS84 486 aa6.02□□□□□ -1.45
PTCH1-216ENST00000548379 PLAGL2Q9UPG8 496 aa6.02□□□□□ -1.45
PTCH1-216ENST00000548379 AKT3Q9Y243 479 aa6.02□□□□□ -1.45
PTCH1-216ENST00000548379 GNAT3A8MTJ3 354 aa6.01□□□□□ -1.45
PTCH1-216ENST00000548379 NOP56O00567 594 aaKnown RBP6.01□□□□□ -1.45
PTCH1-216ENST00000548379 DYRK3O43781 588 aa6.01□□□□□ -1.45
PTCH1-216ENST00000548379 GRIA2P42262 883 aa6.01□□□□□ -1.45
PTCH1-216ENST00000548379 CYP4F3Q08477 520 aa6.01□□□□□ -1.45
PTCH1-216ENST00000548379 TKFCQ3LXA3 575 aa6.01□□□□□ -1.45
PTCH1-216ENST00000548379 NOL9Q5SY16 702 aaKnown RBP6.01□□□□□ -1.45
PTCH1-216ENST00000548379 CRACR2BQ8N4Y2 399 aaPredicted RBP6.01□□□□□ -1.45
PTCH1-216ENST00000548379 OSBP2Q969R2 916 aa6.01□□□□□ -1.45
PTCH1-216ENST00000548379 OSBPL1AQ9BXW6 950 aa6.01□□□□□ -1.45
PTCH1-216ENST00000548379 NOL6Q9H6R4 1146 aaKnown RBP6.01□□□□□ -1.45
PTCH1-216ENST00000548379 ATG3Q9NT62 314 aa6.01□□□□□ -1.45
PTCH1-216ENST00000548379 SUGT1Q9Y2Z0 365 aa6.01□□□□□ -1.45
PTCH1-216ENST00000548379 SCG5P05408 212 aa6□□□□□ -1.45
PTCH1-216ENST00000548379 CEACAM5P06731 702 aa6□□□□□ -1.45
PTCH1-216ENST00000548379 CLCN7P51798 805 aa6□□□□□ -1.45
PTCH1-216ENST00000548379 GAB4Q2WGN9 574 aa6□□□□□ -1.45
PTCH1-216ENST00000548379 FAM209AQ5JX71 171 aa6□□□□□ -1.45
PTCH1-216ENST00000548379 YOD1Q5VVQ6 348 aaPredicted RBP6□□□□□ -1.45
PTCH1-216ENST00000548379 GTF2IRD2BQ6EKJ0 949 aa6□□□□□ -1.45
PTCH1-216ENST00000548379 GTF2IRD2Q86UP8 949 aa6□□□□□ -1.45
PTCH1-216ENST00000548379 SCUBE1Q8IWY4 988 aa6□□□□□ -1.45
PTCH1-216ENST00000548379 ZNF655Q8N720 491 aaPredicted RBP6□□□□□ -1.45
PTCH1-216ENST00000548379 FAM181AQ8N9Y4 354 aa6□□□□□ -1.45
PTCH1-216ENST00000548379 FEZ1Q99689 392 aa6□□□□□ -1.45
PTCH1-216ENST00000548379 NKX2-4Q9H2Z4 354 aa6□□□□□ -1.45
PTCH1-216ENST00000548379 SEMA3GQ9NS98 782 aa6□□□□□ -1.45
PTCH1-216ENST00000548379 LRP2BPQ9P2M1 347 aa6□□□□□ -1.45
PTCH1-216ENST00000548379 MINPP1Q9UNW1 487 aa6□□□□□ -1.45
PTCH1-216ENST00000548379 SF3B6Q9Y3B4 125 aaKnown RBP6□□□□□ -1.45
PTCH1-216ENST00000548379 TRBV23-1A0A0A0MS06 115 aa5.99□□□□□ -1.45
PTCH1-216ENST00000548379 H0Y8X5 98 aa5.99□□□□□ -1.45
PTCH1-216ENST00000548379 GSNP06396 782 aa5.99□□□□□ -1.45
PTCH1-216ENST00000548379 PABPC1P11940 636 aaKnown RBP5.99□□□□□ -1.45
PTCH1-216ENST00000548379 GFRA1P56159 465 aa5.99□□□□□ -1.45
PTCH1-216ENST00000548379 TCEA2Q15560 299 aa5.99□□□□□ -1.45
PTCH1-216ENST00000548379 THAP5Q7Z6K1 395 aa5.99□□□□□ -1.45
PTCH1-216ENST00000548379 TSPYL5Q86VY4 417 aaPredicted RBP5.99□□□□□ -1.45
PTCH1-216ENST00000548379 BTN2A2Q8WVV5 523 aa5.99□□□□□ -1.45
PTCH1-216ENST00000548379 TCTN2Q96GX1 697 aa5.99□□□□□ -1.45
PTCH1-216ENST00000548379 C1orf159Q96HA4 380 aa5.99□□□□□ -1.45
PTCH1-216ENST00000548379 MCMBPQ9BTE3 642 aa5.99□□□□□ -1.45
PTCH1-216ENST00000548379 DHRS4Q9BTZ2 278 aa5.99□□□□□ -1.45
PTCH1-216ENST00000548379 CYP26B1Q9NR63 512 aa5.99□□□□□ -1.45
PTCH1-216ENST00000548379 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.99□□□□□ -1.45
PTCH1-216ENST00000548379 MRPS23Q9Y3D9 190 aaKnown RBP5.99□□□□□ -1.45
PTCH1-216ENST00000548379 DNAJC25-GNG10A0A024R161 153 aa5.98□□□□□ -1.45
PTCH1-216ENST00000548379 FAM155AB1AL88 458 aaPredicted RBP5.98□□□□□ -1.45
PTCH1-216ENST00000548379 MSTNO14793 375 aa5.98□□□□□ -1.45
PTCH1-216ENST00000548379 PPP1R12AO14974 1030 aaPredicted RBP5.98□□□□□ -1.45
PTCH1-216ENST00000548379 KCNQ2O43526 872 aa5.98□□□□□ -1.45
PTCH1-216ENST00000548379 DLX3O60479 287 aa5.98□□□□□ -1.45
PTCH1-216ENST00000548379 RFPL3O75679 317 aa5.98□□□□□ -1.45
PTCH1-216ENST00000548379 CLSTN1O94985 981 aa5.98□□□□□ -1.45
PTCH1-216ENST00000548379 KCNH1O95259 989 aa5.98□□□□□ -1.45
PTCH1-216ENST00000548379 FOSL1P15407 271 aa5.98□□□□□ -1.45
PTCH1-216ENST00000548379 L1CAMP32004 1257 aa5.98□□□□□ -1.45
PTCH1-216ENST00000548379 BMP8BP34820 402 aa5.98□□□□□ -1.45
PTCH1-216ENST00000548379 MAP4K2Q12851 820 aa5.98□□□□□ -1.45
PTCH1-216ENST00000548379 PPP2R5DQ14738 602 aa5.98□□□□□ -1.45
PTCH1-216ENST00000548379 PPP1R14AQ96A00 147 aa5.98□□□□□ -1.45
PTCH1-216ENST00000548379 CCDC140Q96MF4 163 aa5.98□□□□□ -1.45
PTCH1-216ENST00000548379 ZDHHC15Q96MV8 337 aa5.98□□□□□ -1.45
PTCH1-216ENST00000548379 DSCC1Q9BVC3 393 aa5.98□□□□□ -1.45
PTCH1-216ENST00000548379 ASCC2Q9H1I8 757 aaPredicted RBP5.98□□□□□ -1.45
PTCH1-216ENST00000548379 TRIT1Q9H3H1 467 aaKnown RBP5.98□□□□□ -1.45
PTCH1-216ENST00000548379 PIM2Q9P1W9 311 aa5.98□□□□□ -1.45
PTCH1-216ENST00000548379 SNX11Q9Y5W9 270 aa5.98□□□□□ -1.45
PTCH1-216ENST00000548379 ANKRD62A6NC57 917 aa5.97□□□□□ -1.45
PTCH1-216ENST00000548379 PLD2O14939 933 aa5.97□□□□□ -1.45
PTCH1-216ENST00000548379 CYP26A1O43174 497 aa5.97□□□□□ -1.45
PTCH1-216ENST00000548379 PRODHO43272 600 aa5.97□□□□□ -1.45
PTCH1-216ENST00000548379 VAMP4O75379 141 aa5.97□□□□□ -1.45
PTCH1-216ENST00000548379 ASMTLO95671 621 aa5.97□□□□□ -1.45
PTCH1-216ENST00000548379 C6orf222P0C671 652 aaPredicted RBP5.97□□□□□ -1.45
PTCH1-216ENST00000548379 ITIH2P19823 946 aa5.97□□□□□ -1.45
PTCH1-216ENST00000548379 HOXC12P31275 282 aa5.97□□□□□ -1.45
PTCH1-216ENST00000548379 AMPD2Q01433 879 aa5.97□□□□□ -1.45
PTCH1-216ENST00000548379 POU4F1Q01851 419 aa5.97□□□□□ -1.45
PTCH1-216ENST00000548379 TESK1Q15569 626 aa5.97□□□□□ -1.45
PTCH1-216ENST00000548379 SF1Q15637 639 aaKnown RBP5.97□□□□□ -1.45
PTCH1-216ENST00000548379 IFI16Q16666 785 aaKnown RBP5.97□□□□□ -1.45
PTCH1-216ENST00000548379 TRIM61Q5EBN2 209 aa5.97□□□□□ -1.45
PTCH1-216ENST00000548379 SLC35F1Q5T1Q4 408 aa5.97□□□□□ -1.45
PTCH1-216ENST00000548379 CRTC3Q6UUV7 619 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms