RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 KIF23Q02241 960 aaPredicted RBP8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 SSRP1Q08945 709 aaKnown RBP8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 PRKG1Q13976 671 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 PPP4R3BQ5MIZ7 849 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 FOXD4L5Q5VV16 416 aaPredicted RBP8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 KRT40Q6A162 431 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 WWC2Q6AWC2 1192 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 FAM173BQ6P4H8 233 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 LDHDQ86WU2 507 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 FOXD4L4Q8WXT5 416 aaPredicted RBP8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 TNFRSF25Q93038 417 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 HOOK2Q96ED9 719 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 ALG1Q9BT22 464 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 GPCPD1Q9NPB8 672 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 AFG3L2Q9Y4W6 797 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 SMCHD1A6NHR9 2005 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 LOC285556D6RIA3 1793 aa8.08□□□□□ -1.12
HMGCS2-204ENST00000544913 MYH15Q9Y2K3 1946 aa8.08□□□□□ -1.12
HMGCS2-204ENST00000544913 USP17L10C9JJH3 530 aa8.08□□□□□ -1.12
HMGCS2-204ENST00000544913 STXBP3O00186 592 aa8.08□□□□□ -1.12
HMGCS2-204ENST00000544913 SCG2P13521 617 aa8.08□□□□□ -1.12
HMGCS2-204ENST00000544913 GJA5P36382 358 aa8.08□□□□□ -1.12
HMGCS2-204ENST00000544913 MTMR2Q13614 643 aa8.08□□□□□ -1.12
HMGCS2-204ENST00000544913 MOGSQ13724 837 aa8.08□□□□□ -1.12
HMGCS2-204ENST00000544913 UVSSAQ2YD98 709 aa8.08□□□□□ -1.12
HMGCS2-204ENST00000544913 GPATCH4Q5T3I0 446 aaKnown RBP8.08□□□□□ -1.12
HMGCS2-204ENST00000544913 FERMT3Q86UX7 667 aa8.08□□□□□ -1.12
HMGCS2-204ENST00000544913 OXER1Q8TDS5 423 aa8.08□□□□□ -1.12
HMGCS2-204ENST00000544913 ZNF526Q8TF50 670 aaPredicted RBP8.08□□□□□ -1.12
HMGCS2-204ENST00000544913 GPKOWQ92917 476 aaPredicted RBP eCLIP8.08□□□□□ -1.12
HMGCS2-204ENST00000544913 C12orf42Q96LP6 360 aa8.08□□□□□ -1.12
HMGCS2-204ENST00000544913 PIGSQ96S52 555 aa8.08□□□□□ -1.12
HMGCS2-204ENST00000544913 PHF20Q9BVI0 1012 aa8.08□□□□□ -1.12
HMGCS2-204ENST00000544913 VPS54Q9P1Q0 977 aa8.08□□□□□ -1.12
HMGCS2-204ENST00000544913 VPS37CA5D8V6 355 aaPredicted RBP8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 M0R2N6 131 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 KIF3CO14782 793 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 BMP3P12645 472 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 TAL1P17542 331 aaPredicted RBP8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 SLC1A4P43007 532 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 GNAQP50148 359 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 MAP3K9P80192 1104 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 SPP2Q13103 211 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 ZYXQ15942 572 aaKnown RBP8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 NOM1Q5C9Z4 860 aaKnown RBP8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 EARS2Q5JPH6 523 aaKnown RBP8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 FAM83BQ5T0W9 1011 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 CST9Q5W186 159 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 CPLX2Q6PUV4 134 aaKnown RBP8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 POTEEQ6S8J3 1075 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 ADGRF4Q8IZF3 695 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 C8orf76Q96K31 380 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 LZTS2Q9BRK4 669 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 SCAND2PQ9GZW5 306 aaPredicted RBP8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 ARHGEF10LQ9HCE6 1279 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 FBXO28Q9NVF7 368 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 KCNJ14Q9UNX9 436 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 ELP1O95163 1332 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 SPDYE5A6NIY4 337 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 MMP1P03956 469 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 VCAM1P19320 739 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 U2AF2P26368 475 aaKnown RBP eCLIP8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 BACE1P56817 501 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 KRT85P78386 507 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 CCDC183Q5T5S1 534 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 ATL3Q6DD88 541 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 TRIM22Q8IYM9 498 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 ZNF280CQ8ND82 737 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 PIBF1Q8WXW3 757 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 PANK2Q9BZ23 570 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 ZSCAN16Q9H4T2 348 aaPredicted RBP8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 BARHL2Q9NY43 387 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 TMEM63CQ9P1W3 806 aa8.07□□□□□ -1.12
HMGCS2-204ENST00000544913 PASKQ96RG2 1323 aa8.06□□□□□ -1.12
HMGCS2-204ENST00000544913 FAM205CA6NFA0 338 aa8.06□□□□□ -1.12
HMGCS2-204ENST00000544913 WNT7AO00755 349 aa8.06□□□□□ -1.12
HMGCS2-204ENST00000544913 OPLAHO14841 1288 aa8.06□□□□□ -1.12
HMGCS2-204ENST00000544913 PLA2G6O60733 806 aa8.06□□□□□ -1.12
HMGCS2-204ENST00000544913 CLCN1P35523 988 aa8.06□□□□□ -1.12
HMGCS2-204ENST00000544913 SNAP25P60880 206 aa8.06□□□□□ -1.12
HMGCS2-204ENST00000544913 CCDC96Q2M329 555 aa8.06□□□□□ -1.12
HMGCS2-204ENST00000544913 QRICH1Q2TAL8 776 aa8.06□□□□□ -1.12
HMGCS2-204ENST00000544913 SH3D19Q5HYK7 790 aa8.06□□□□□ -1.12
HMGCS2-204ENST00000544913 LPAR1Q92633 364 aa8.06□□□□□ -1.12
HMGCS2-204ENST00000544913 TSPY26PQ9H489 355 aa8.06□□□□□ -1.12
HMGCS2-204ENST00000544913 GOPCQ9HD26 462 aa8.06□□□□□ -1.12
HMGCS2-204ENST00000544913 PRR12Q9ULL5 1215 aa8.06□□□□□ -1.12
HMGCS2-204ENST00000544913 KCNH4Q9UQ05 1017 aa8.06□□□□□ -1.12
HMGCS2-204ENST00000544913 ZHX2Q9Y6X8 837 aa8.06□□□□□ -1.12
HMGCS2-204ENST00000544913 A0A0G2JMZ2 1700 aa8.06□□□□□ -1.12
HMGCS2-204ENST00000544913 ZNF536O15090 1300 aa8.06□□□□□ -1.12
HMGCS2-204ENST00000544913 TRIM75PA6NK02 468 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 BTBD18B2RXH4 712 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 TMEM232C9JQI7 657 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 IRF6O14896 467 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 PPP1R12BO60237 982 aaPredicted RBP8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 HMGCS2P54868 508 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 NR5A1Q13285 461 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 SYDE2Q5VT97 1194 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 HOMER1Q86YM7 354 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms