RNA–Protein interactions for RNA: ENST00000540280.1

TMEM109-203, Transcript of transmembrane protein 109, humanhuman

TSL 3

Gene TMEM109, Length 724 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM109-203ENST00000540280 SIPA1L1O43166 1804 aa13.34□□□□□ -0.27
TMEM109-203ENST00000540280 LCHNA4D1U4 455 aa13.34□□□□□ -0.27
TMEM109-203ENST00000540280 MOXD2PA6NHM9 499 aa13.34□□□□□ -0.27
TMEM109-203ENST00000540280 ARVCFO00192 962 aa13.34□□□□□ -0.27
TMEM109-203ENST00000540280 TLR3O15455 904 aaKnown RBP13.34□□□□□ -0.27
TMEM109-203ENST00000540280 CD4P01730 458 aa13.34□□□□□ -0.27
TMEM109-203ENST00000540280 MVPQ14764 893 aaKnown RBP13.34□□□□□ -0.27
TMEM109-203ENST00000540280 KLHDC9Q8NEP7 349 aa13.34□□□□□ -0.27
TMEM109-203ENST00000540280 PANK1Q8TE04 598 aa13.34□□□□□ -0.27
TMEM109-203ENST00000540280 SCLYQ96I15 445 aa13.34□□□□□ -0.27
TMEM109-203ENST00000540280 MAML3Q96JK9 1138 aa13.34□□□□□ -0.27
TMEM109-203ENST00000540280 GLT1D1Q96MS3 346 aa13.34□□□□□ -0.27
TMEM109-203ENST00000540280 CHMP4BQ9H444 224 aaKnown RBP13.34□□□□□ -0.27
TMEM109-203ENST00000540280 DDX19BQ9UMR2 479 aa13.34□□□□□ -0.27
TMEM109-203ENST00000540280 MROH5Q6ZUA9 1318 aa13.34□□□□□ -0.27
TMEM109-203ENST00000540280 ROBO3Q96MS0 1386 aa13.33□□□□□ -0.27
TMEM109-203ENST00000540280 SUGCTQ9HAC7 445 aa13.33□□□□□ -0.28
TMEM109-203ENST00000540280 ELP1O95163 1332 aa13.33□□□□□ -0.28
TMEM109-203ENST00000540280 A0A0U1RQG5 324 aaPredicted RBP13.32□□□□□ -0.28
TMEM109-203ENST00000540280 C19orf81C9J6K1 198 aa13.32□□□□□ -0.28
TMEM109-203ENST00000540280 USP17L10C9JJH3 530 aa13.32□□□□□ -0.28
TMEM109-203ENST00000540280 PUM1Q14671 1186 aaKnown RBP eCLIP13.32□□□□□ -0.28
TMEM109-203ENST00000540280 EP400NLQ6ZTU2 488 aa13.32□□□□□ -0.28
TMEM109-203ENST00000540280 HERC6Q8IVU3 1022 aa13.32□□□□□ -0.28
TMEM109-203ENST00000540280 VTI1AQ96AJ9 217 aa13.32□□□□□ -0.28
TMEM109-203ENST00000540280 NOC4LQ9BVI4 516 aaKnown RBP13.32□□□□□ -0.28
TMEM109-203ENST00000540280 COPRSQ9NQ92 184 aa13.32□□□□□ -0.28
TMEM109-203ENST00000540280 FAM50BQ9Y247 325 aa13.32□□□□□ -0.28
TMEM109-203ENST00000540280 COL11A1P12107 1806 aaPredicted RBP13.32□□□□□ -0.28
TMEM109-203ENST00000540280 EYA2O00167 538 aa13.31□□□□□ -0.28
TMEM109-203ENST00000540280 SRGAP3O43295 1099 aa13.31□□□□□ -0.28
TMEM109-203ENST00000540280 GALR2O43603 387 aaPredicted RBP13.31□□□□□ -0.28
TMEM109-203ENST00000540280 CIAO1O76071 339 aa13.31□□□□□ -0.28
TMEM109-203ENST00000540280 ZXDAP98168 799 aa13.31□□□□□ -0.28
TMEM109-203ENST00000540280 RPUSD2Q8IZ73 545 aaKnown RBP13.31□□□□□ -0.28
TMEM109-203ENST00000540280 KLHDC4Q8TBB5 520 aa13.31□□□□□ -0.28
TMEM109-203ENST00000540280 WDR66Q8TBY9 1149 aa13.31□□□□□ -0.28
TMEM109-203ENST00000540280 SLC9A7Q96T83 725 aa13.31□□□□□ -0.28
TMEM109-203ENST00000540280 MOV10L1Q9BXT6 1211 aaKnown RBP13.31□□□□□ -0.28
TMEM109-203ENST00000540280 COG6Q9Y2V7 657 aa13.31□□□□□ -0.28
TMEM109-203ENST00000540280 CDK5RAP2Q96SN8 1893 aa13.31□□□□□ -0.28
TMEM109-203ENST00000540280 LDHBP07195 334 aaKnown RBP13.3□□□□□ -0.28
TMEM109-203ENST00000540280 ASGR1P07306 291 aa13.3□□□□□ -0.28
TMEM109-203ENST00000540280 ZNF865P0CJ78 1059 aaPredicted RBP13.3□□□□□ -0.28
TMEM109-203ENST00000540280 AKR1A1P14550 325 aa13.3□□□□□ -0.28
TMEM109-203ENST00000540280 RRP1P56182 461 aaKnown RBP13.3□□□□□ -0.28
TMEM109-203ENST00000540280 ATP8B2P98198 1209 aa13.3□□□□□ -0.28
TMEM109-203ENST00000540280 LRRC24Q50LG9 513 aa13.3□□□□□ -0.28
TMEM109-203ENST00000540280 ASPMQ8IZT6 3477 aa13.3□□□□□ -0.28
TMEM109-203ENST00000540280 ZFYVE26Q68DK2 2539 aa13.3□□□□□ -0.28
TMEM109-203ENST00000540280 FLNBO75369 2602 aaKnown RBP13.29□□□□□ -0.28
TMEM109-203ENST00000540280 STRNO43815 780 aa13.29□□□□□ -0.28
TMEM109-203ENST00000540280 PDE8BO95263 885 aa13.29□□□□□ -0.28
TMEM109-203ENST00000540280 POLA2Q14181 598 aa13.29□□□□□ -0.28
TMEM109-203ENST00000540280 ZYXQ15942 572 aaKnown RBP13.29□□□□□ -0.28
TMEM109-203ENST00000540280 METTL24Q5JXM2 366 aa13.29□□□□□ -0.28
TMEM109-203ENST00000540280 C20orf194Q5TEA3 1177 aa13.29□□□□□ -0.28
TMEM109-203ENST00000540280 ATG9AQ7Z3C6 839 aa13.29□□□□□ -0.28
TMEM109-203ENST00000540280 DEFB128Q7Z7B8 93 aa13.29□□□□□ -0.28
TMEM109-203ENST00000540280 VGLL2Q8N8G2 317 aa13.29□□□□□ -0.28
TMEM109-203ENST00000540280 SSH3Q8TE77 659 aa13.29□□□□□ -0.28
TMEM109-203ENST00000540280 ASIC4Q96FT7 647 aa13.29□□□□□ -0.28
TMEM109-203ENST00000540280 POP1Q99575 1024 aaKnown RBP13.29□□□□□ -0.28
TMEM109-203ENST00000540280 ZBTB40Q9NUA8 1239 aa13.29□□□□□ -0.28
TMEM109-203ENST00000540280 NRBP1Q9UHY1 535 aa13.29□□□□□ -0.28
TMEM109-203ENST00000540280 MAST4O15021 2626 aa13.29□□□□□ -0.28
TMEM109-203ENST00000540280 PNMA6EA0A0J9YXQ4 647 aa13.28□□□□□ -0.28
TMEM109-203ENST00000540280 SPDYE16A6NNV3 312 aaPredicted RBP13.28□□□□□ -0.28
TMEM109-203ENST00000540280 KIF28PB7ZC32 967 aa13.28□□□□□ -0.28
TMEM109-203ENST00000540280 USP17L15C9J2P7 530 aa13.28□□□□□ -0.28
TMEM109-203ENST00000540280 USP17L13C9JLJ4 530 aa13.28□□□□□ -0.28
TMEM109-203ENST00000540280 USP17L11C9JVI0 530 aa13.28□□□□□ -0.28
TMEM109-203ENST00000540280 USP17L18D6R9N7 530 aa13.28□□□□□ -0.28
TMEM109-203ENST00000540280 USP17L22D6RA61 530 aa13.28□□□□□ -0.28
TMEM109-203ENST00000540280 USP17L17D6RBQ6 530 aa13.28□□□□□ -0.28
TMEM109-203ENST00000540280 USP17L19D6RCP7 530 aa13.28□□□□□ -0.28
TMEM109-203ENST00000540280 USP17L20D6RJB6 530 aa13.28□□□□□ -0.28
TMEM109-203ENST00000540280 PDGFBP01127 241 aaPredicted RBP13.28□□□□□ -0.28
TMEM109-203ENST00000540280 ERCC3P19447 782 aa13.28□□□□□ -0.28
TMEM109-203ENST00000540280 IL15P40933 162 aaPredicted RBP13.28□□□□□ -0.28
TMEM109-203ENST00000540280 USP17L24Q0WX57 530 aa13.28□□□□□ -0.28
TMEM109-203ENST00000540280 CLUL1Q15846 466 aa13.28□□□□□ -0.28
TMEM109-203ENST00000540280 TMCO2Q7Z6W1 182 aaPredicted RBP13.28□□□□□ -0.28
TMEM109-203ENST00000540280 KIAA2013Q8IYS2 634 aa13.28□□□□□ -0.28
TMEM109-203ENST00000540280 SLC5A4Q9NY91 659 aa13.28□□□□□ -0.28
TMEM109-203ENST00000540280 GCN1Q92616 2671 aaKnown RBP13.28□□□□□ -0.28
TMEM109-203ENST00000540280 GDF11O95390 407 aa13.27□□□□□ -0.29
TMEM109-203ENST00000540280 ASNSP08243 561 aa13.27□□□□□ -0.29
TMEM109-203ENST00000540280 C6orf222P0C671 652 aaPredicted RBP13.27□□□□□ -0.29
TMEM109-203ENST00000540280 SMAD2Q15796 467 aaKnown RBP13.27□□□□□ -0.29
TMEM109-203ENST00000540280 CEP85Q6P2H3 762 aa13.27□□□□□ -0.29
TMEM109-203ENST00000540280 USP17L2Q6R6M4 530 aa13.27□□□□□ -0.29
TMEM109-203ENST00000540280 LBX2Q6XYB7 198 aa13.27□□□□□ -0.29
TMEM109-203ENST00000540280 CATSPERGQ6ZRH7 1159 aa13.27□□□□□ -0.29
TMEM109-203ENST00000540280 RPAP2Q8IXW5 612 aaPredicted RBP13.27□□□□□ -0.29
TMEM109-203ENST00000540280 PHOSPHO2Q8TCD6 241 aa13.27□□□□□ -0.29
TMEM109-203ENST00000540280 PABPC5Q96DU9 382 aaKnown RBP13.27□□□□□ -0.29
TMEM109-203ENST00000540280 AGBL1Q96MI9 1066 aa13.27□□□□□ -0.29
TMEM109-203ENST00000540280 TRPV6Q9H1D0 765 aa13.27□□□□□ -0.29
TMEM109-203ENST00000540280 C1orf115Q9H7X2 142 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms