RNA–Protein interactions for RNA: ENST00000538573.1

LINC02408-202, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 4 BASIC

Gene LINC02408, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-202ENST00000538573 CYB5R4Q7L1T6 521 aa6.1□□□□□ -1.43
LINC02408-202ENST00000538573 SH3BP5LQ7L8J4 393 aa6.1□□□□□ -1.43
LINC02408-202ENST00000538573 FOXP4Q8IVH2 680 aaPredicted RBP6.1□□□□□ -1.43
LINC02408-202ENST00000538573 MB21D2Q8IYB1 491 aaPredicted RBP6.1□□□□□ -1.43
LINC02408-202ENST00000538573 SLC44A5Q8NCS7 719 aa6.1□□□□□ -1.43
LINC02408-202ENST00000538573 IL27Q8NEV9 243 aa6.1□□□□□ -1.43
LINC02408-202ENST00000538573 FAM151AQ8WW52 585 aa6.1□□□□□ -1.43
LINC02408-202ENST00000538573 ESR2Q92731 530 aa6.1□□□□□ -1.43
LINC02408-202ENST00000538573 SNX21Q969T3 373 aa6.1□□□□□ -1.43
LINC02408-202ENST00000538573 IPO9Q96P70 1041 aaKnown RBP6.1□□□□□ -1.43
LINC02408-202ENST00000538573 PURBQ96QR8 312 aaKnown RBP6.1□□□□□ -1.43
LINC02408-202ENST00000538573 CSRNP1Q96S65 589 aa6.1□□□□□ -1.43
LINC02408-202ENST00000538573 ZKSCAN3Q9BRR0 538 aa6.1□□□□□ -1.43
LINC02408-202ENST00000538573 LRRC2Q9BYS8 371 aa6.1□□□□□ -1.43
LINC02408-202ENST00000538573 ADARB2Q9NS39 739 aaKnown RBP6.1□□□□□ -1.43
LINC02408-202ENST00000538573 ZSWIM5Q9P217 1185 aa6.1□□□□□ -1.43
LINC02408-202ENST00000538573 PI4KBQ9UBF8 816 aa6.1□□□□□ -1.43
LINC02408-202ENST00000538573 SERPINB13Q9UIV8 391 aa6.1□□□□□ -1.43
LINC02408-202ENST00000538573 NAP1L2Q9ULW6 460 aaPredicted RBP6.1□□□□□ -1.43
LINC02408-202ENST00000538573 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.1□□□□□ -1.43
LINC02408-202ENST00000538573 POLR2AP24928 1970 aaKnown RBP6.09□□□□□ -1.43
LINC02408-202ENST00000538573 CNTNAP1P78357 1384 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 DDX60LQ5H9U9 1706 aaKnown RBP6.09□□□□□ -1.43
LINC02408-202ENST00000538573 ERICH2A1L162 156 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 IQCA1LA6NCM1 817 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 TSPY2A6NKD2 308 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 IFIT3O14879 490 aaKnown RBP6.09□□□□□ -1.43
LINC02408-202ENST00000538573 TRIM66O15016 1216 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 ORC4O43929 436 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 UPP2O95045 317 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 HSP90AA1P07900 732 aaKnown RBP6.09□□□□□ -1.43
LINC02408-202ENST00000538573 FGRP09769 529 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 TSPY3P0CV98 308 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 TSPY8P0CW00 308 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 SLURP2P0DP57 97 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 RASA1P20936 1047 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 EPHX2P34913 555 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 GMPRP36959 345 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 MCM2P49736 904 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 ANTXR2P58335 489 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 TOB2Q14106 344 aaPredicted RBP6.09□□□□□ -1.43
LINC02408-202ENST00000538573 SART3Q15020 963 aaKnown RBP6.09□□□□□ -1.43
LINC02408-202ENST00000538573 ANKRD1Q15327 319 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 EAPPQ56P03 285 aaPredicted RBP6.09□□□□□ -1.43
LINC02408-202ENST00000538573 TMEM67Q5HYA8 995 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 PRPF38BQ5VTL8 546 aaKnown RBP6.09□□□□□ -1.43
LINC02408-202ENST00000538573 NFXL1Q6ZNB6 911 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 FAM83AQ86UY5 434 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 BPHLQ86WA6 291 aaPredicted RBP6.09□□□□□ -1.43
LINC02408-202ENST00000538573 APOBEC3FQ8IUX4 373 aaKnown RBP6.09□□□□□ -1.43
LINC02408-202ENST00000538573 PARP9Q8IXQ6 854 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 ARMC2Q8NEN0 867 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 BRF1Q92994 677 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 DCPSQ96C86 337 aaKnown RBP6.09□□□□□ -1.43
LINC02408-202ENST00000538573 TTC14Q96N46 770 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 UBAC1Q9BSL1 405 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 TMEM39BQ9GZU3 492 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 ALDH8A1Q9H2A2 487 aaPredicted RBP6.09□□□□□ -1.43
LINC02408-202ENST00000538573 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.09□□□□□ -1.43
LINC02408-202ENST00000538573 GGA3Q9NZ52 723 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 SWAP70Q9UH65 585 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 LIMCH1Q9UPQ0 1083 aa6.09□□□□□ -1.43
LINC02408-202ENST00000538573 ATRNL1Q5VV63 1379 aa6.08□□□□□ -1.44
LINC02408-202ENST00000538573 ROBO3Q96MS0 1386 aa6.08□□□□□ -1.44
LINC02408-202ENST00000538573 WDR19Q8NEZ3 1342 aa6.08□□□□□ -1.44
LINC02408-202ENST00000538573 FAM196BA6NMK8 535 aa6.08□□□□□ -1.44
LINC02408-202ENST00000538573 CFAP99D6REC4 459 aa6.08□□□□□ -1.44
LINC02408-202ENST00000538573 K7ELQ4 463 aaPredicted RBP6.08□□□□□ -1.44
LINC02408-202ENST00000538573 MPHOSPH10O00566 681 aaKnown RBP6.08□□□□□ -1.44
LINC02408-202ENST00000538573 NMT2O60551 498 aa6.08□□□□□ -1.44
LINC02408-202ENST00000538573 GABPAQ06546 454 aa6.08□□□□□ -1.44
LINC02408-202ENST00000538573 APOBRQ0VD83 1088 aa6.08□□□□□ -1.44
LINC02408-202ENST00000538573 STK3Q13188 491 aa6.08□□□□□ -1.44
LINC02408-202ENST00000538573 WTAPQ15007 396 aa6.08□□□□□ -1.44
LINC02408-202ENST00000538573 PRAMEF18Q5VWM3 479 aa6.08□□□□□ -1.44
LINC02408-202ENST00000538573 USP50Q70EL3 339 aaPredicted RBP6.08□□□□□ -1.44
LINC02408-202ENST00000538573 MIGA2Q7L4E1 593 aa6.08□□□□□ -1.44
LINC02408-202ENST00000538573 IQCA1Q86XH1 822 aa6.08□□□□□ -1.44
LINC02408-202ENST00000538573 IGDCC4Q8TDY8 1250 aa6.08□□□□□ -1.44
LINC02408-202ENST00000538573 ZNF526Q8TF50 670 aaPredicted RBP6.08□□□□□ -1.44
LINC02408-202ENST00000538573 FOXJ1Q92949 421 aa6.08□□□□□ -1.44
LINC02408-202ENST00000538573 TMEM87BQ96K49 555 aa6.08□□□□□ -1.44
LINC02408-202ENST00000538573 ZSCAN31Q96LW9 406 aaPredicted RBP6.08□□□□□ -1.44
LINC02408-202ENST00000538573 ZSCAN10Q96SZ4 725 aaPredicted RBP6.08□□□□□ -1.44
LINC02408-202ENST00000538573 DEFB129Q9H1M3 183 aa6.08□□□□□ -1.44
LINC02408-202ENST00000538573 EHD4Q9H223 541 aa6.08□□□□□ -1.44
LINC02408-202ENST00000538573 TAF1DQ9H5J8 278 aaPredicted RBP6.08□□□□□ -1.44
LINC02408-202ENST00000538573 RRAGCQ9HB90 399 aa6.08□□□□□ -1.44
LINC02408-202ENST00000538573 MAP10Q9P2G4 905 aa6.08□□□□□ -1.44
LINC02408-202ENST00000538573 HERC5Q9UII4 1024 aaKnown RBP6.08□□□□□ -1.44
LINC02408-202ENST00000538573 TPCN1Q9ULQ1 816 aa6.08□□□□□ -1.44
LINC02408-202ENST00000538573 SCN4AP35499 1836 aa6.08□□□□□ -1.44
LINC02408-202ENST00000538573 TNKSO95271 1327 aa6.07□□□□□ -1.44
LINC02408-202ENST00000538573 SIPA1L1O43166 1804 aa6.07□□□□□ -1.44
LINC02408-202ENST00000538573 KLF18A0A0U1RQI7 1052 aa6.07□□□□□ -1.44
LINC02408-202ENST00000538573 CCDC69A6NI79 296 aa6.07□□□□□ -1.44
LINC02408-202ENST00000538573 SH2B2O14492 632 aaPredicted RBP6.07□□□□□ -1.44
LINC02408-202ENST00000538573 MAN1A2O60476 641 aa6.07□□□□□ -1.44
LINC02408-202ENST00000538573 ZIC2O95409 532 aaPredicted RBP6.07□□□□□ -1.44
LINC02408-202ENST00000538573 AKR1B1P15121 316 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms