RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 CWC22Q9HCG8 908 aaKnown RBP12.58□□□□□ -0.4
UBE3B-205ENST00000535900 CIZ1Q9ULV3 898 aaPredicted RBP12.58□□□□□ -0.4
UBE3B-205ENST00000535900 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.58□□□□□ -0.4
UBE3B-205ENST00000535900 SLC12A7Q9Y666 1083 aa12.58□□□□□ -0.4
UBE3B-205ENST00000535900 PLXNB2O15031 1838 aa12.58□□□□□ -0.4
UBE3B-205ENST00000535900 NID2Q14112 1375 aa12.57□□□□□ -0.4
UBE3B-205ENST00000535900 C19orf81C9J6K1 198 aa12.57□□□□□ -0.4
UBE3B-205ENST00000535900 PFKFB2O60825 505 aa12.57□□□□□ -0.4
UBE3B-205ENST00000535900 TTLL1O95922 423 aa12.57□□□□□ -0.4
UBE3B-205ENST00000535900 GH2P01242 217 aa12.57□□□□□ -0.4
UBE3B-205ENST00000535900 TFRCP02786 760 aaKnown RBP12.57□□□□□ -0.4
UBE3B-205ENST00000535900 HSP90AA1P07900 732 aaKnown RBP12.57□□□□□ -0.4
UBE3B-205ENST00000535900 TOP1P11387 765 aaKnown RBP12.57□□□□□ -0.4
UBE3B-205ENST00000535900 FXR1P51114 621 aaKnown RBP eCLIP12.57□□□□□ -0.4
UBE3B-205ENST00000535900 HERVK_113P62684 666 aa12.57□□□□□ -0.4
UBE3B-205ENST00000535900 JAG1P78504 1218 aa12.57□□□□□ -0.4
UBE3B-205ENST00000535900 ZYXQ15942 572 aaKnown RBP12.57□□□□□ -0.4
UBE3B-205ENST00000535900 FAM47AQ5JRC9 791 aa12.57□□□□□ -0.4
UBE3B-205ENST00000535900 APOA5Q6Q788 366 aa12.57□□□□□ -0.4
UBE3B-205ENST00000535900 CHST3Q7LGC8 479 aa12.57□□□□□ -0.4
UBE3B-205ENST00000535900 UBE2Q1Q7Z7E8 422 aa12.57□□□□□ -0.4
UBE3B-205ENST00000535900 CCAR1Q8IX12 1150 aaKnown RBP12.57□□□□□ -0.4
UBE3B-205ENST00000535900 GTF3C2Q8WUA4 911 aaPredicted RBP12.57□□□□□ -0.4
UBE3B-205ENST00000535900 LLPHQ9BRT6 129 aaKnown RBP12.57□□□□□ -0.4
UBE3B-205ENST00000535900 PAGR1Q9BTK6 254 aa12.57□□□□□ -0.4
UBE3B-205ENST00000535900 LRRC2Q9BYS8 371 aa12.57□□□□□ -0.4
UBE3B-205ENST00000535900 SLKQ9H2G2 1235 aaPredicted RBP12.57□□□□□ -0.4
UBE3B-205ENST00000535900 PAK6Q9NQU5 681 aaPredicted RBP12.57□□□□□ -0.4
UBE3B-205ENST00000535900 MTMR4Q9NYA4 1195 aa12.57□□□□□ -0.4
UBE3B-205ENST00000535900 NYAP2Q9P242 653 aa12.57□□□□□ -0.4
UBE3B-205ENST00000535900 MORF4L1Q9UBU8 362 aa12.57□□□□□ -0.4
UBE3B-205ENST00000535900 TPCN1Q9ULQ1 816 aa12.57□□□□□ -0.4
UBE3B-205ENST00000535900 NR2E3Q9Y5X4 410 aa12.57□□□□□ -0.4
UBE3B-205ENST00000535900 GREB1LQ9C091 1923 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-205ENST00000535900 DOCK3Q8IZD9 2030 aa12.56□□□□□ -0.4
UBE3B-205ENST00000535900 KLF18A0A0U1RQI7 1052 aa12.56□□□□□ -0.4
UBE3B-205ENST00000535900 ZBTB43O43298 467 aa12.56□□□□□ -0.4
UBE3B-205ENST00000535900 AKR1B1P15121 316 aa12.56□□□□□ -0.4
UBE3B-205ENST00000535900 PDIA3P30101 505 aaKnown RBP12.56□□□□□ -0.4
UBE3B-205ENST00000535900 APOBRQ0VD83 1088 aa12.56□□□□□ -0.4
UBE3B-205ENST00000535900 COL9A3Q14050 684 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-205ENST00000535900 RAB3GAP1Q15042 981 aa12.56□□□□□ -0.4
UBE3B-205ENST00000535900 ME3Q16798 604 aa12.56□□□□□ -0.4
UBE3B-205ENST00000535900 CPLX2Q6PUV4 134 aaKnown RBP12.56□□□□□ -0.4
UBE3B-205ENST00000535900 GPRC5AQ8NFJ5 357 aa12.56□□□□□ -0.4
UBE3B-205ENST00000535900 SOCS4Q8WXH5 440 aa12.56□□□□□ -0.4
UBE3B-205ENST00000535900 GTF3C6Q969F1 213 aa12.56□□□□□ -0.4
UBE3B-205ENST00000535900 MKL1Q969V6 931 aa12.56□□□□□ -0.4
UBE3B-205ENST00000535900 KAT14Q9H8E8 782 aa12.56□□□□□ -0.4
UBE3B-205ENST00000535900 IL17RBQ9NRM6 502 aa12.56□□□□□ -0.4
UBE3B-205ENST00000535900 GOLGA8BA8MQT2 603 aa12.55□□□□□ -0.4
UBE3B-205ENST00000535900 MPHOSPH10O00566 681 aaKnown RBP12.55□□□□□ -0.4
UBE3B-205ENST00000535900 CDKL5O76039 1030 aa12.55□□□□□ -0.4
UBE3B-205ENST00000535900 CAPN2P17655 700 aa12.55□□□□□ -0.4
UBE3B-205ENST00000535900 CYP2B6P20813 491 aa12.55□□□□□ -0.4
UBE3B-205ENST00000535900 MAPK4P31152 587 aa12.55□□□□□ -0.4
UBE3B-205ENST00000535900 HOXA7P31268 230 aaPredicted RBP12.55□□□□□ -0.4
UBE3B-205ENST00000535900 KIF5BP33176 963 aa12.55□□□□□ -0.4
UBE3B-205ENST00000535900 GNAQP50148 359 aa12.55□□□□□ -0.4
UBE3B-205ENST00000535900 RCSD1Q6JBY9 416 aa12.55□□□□□ -0.4
UBE3B-205ENST00000535900 USP17L2Q6R6M4 530 aa12.55□□□□□ -0.4
UBE3B-205ENST00000535900 ZNF654Q8IZM8 581 aa12.55□□□□□ -0.4
UBE3B-205ENST00000535900 CEP95Q96GE4 821 aa12.55□□□□□ -0.4
UBE3B-205ENST00000535900 P2RX7Q99572 595 aaKnown RBP12.55□□□□□ -0.4
UBE3B-205ENST00000535900 NUDT12Q9BQG2 462 aa12.55□□□□□ -0.4
UBE3B-205ENST00000535900 ZKSCAN3Q9BRR0 538 aa12.55□□□□□ -0.4
UBE3B-205ENST00000535900 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.55□□□□□ -0.4
UBE3B-205ENST00000535900 SH2D4AQ9H788 454 aa12.55□□□□□ -0.4
UBE3B-205ENST00000535900 HMX1Q9NP08 348 aaPredicted RBP12.55□□□□□ -0.4
UBE3B-205ENST00000535900 RBM28Q9NW13 759 aaKnown RBP12.55□□□□□ -0.4
UBE3B-205ENST00000535900 STX8Q9UNK0 236 aa12.55□□□□□ -0.4
UBE3B-205ENST00000535900 KIF3AQ9Y496 699 aa12.55□□□□□ -0.4
UBE3B-205ENST00000535900 ALPK3Q96L96 1907 aa12.54□□□□□ -0.4
UBE3B-205ENST00000535900 EVI5O60447 810 aa12.54□□□□□ -0.4
UBE3B-205ENST00000535900 PEX10O60683 326 aa12.54□□□□□ -0.4
UBE3B-205ENST00000535900 METAP2P50579 478 aaKnown RBP eCLIP12.54□□□□□ -0.4
UBE3B-205ENST00000535900 USP14P54578 494 aa12.54□□□□□ -0.4
UBE3B-205ENST00000535900 ERVK-9P63128 1117 aa12.54□□□□□ -0.4
UBE3B-205ENST00000535900 ERVK-24P63145 666 aa12.54□□□□□ -0.4
UBE3B-205ENST00000535900 PNMA1Q8ND90 353 aa12.54□□□□□ -0.4
UBE3B-205ENST00000535900 RGS22Q8NE09 1264 aa12.54□□□□□ -0.4
UBE3B-205ENST00000535900 TRIB2Q92519 343 aa12.54□□□□□ -0.4
UBE3B-205ENST00000535900 TMEM47Q9BQJ4 181 aa12.54□□□□□ -0.4
UBE3B-205ENST00000535900 LZTS2Q9BRK4 669 aa12.54□□□□□ -0.4
UBE3B-205ENST00000535900 ARHGEF10LQ9HCE6 1279 aa12.54□□□□□ -0.4
UBE3B-205ENST00000535900 TXNRD2Q9NNW7 524 aa12.54□□□□□ -0.4
UBE3B-205ENST00000535900 BRPF3Q9ULD4 1205 aa12.54□□□□□ -0.4
UBE3B-205ENST00000535900 RPTORQ8N122 1335 aa12.54□□□□□ -0.4
UBE3B-205ENST00000535900 CPLX1O14810 134 aa12.53□□□□□ -0.4
UBE3B-205ENST00000535900 NMT2O60551 498 aa12.53□□□□□ -0.4
UBE3B-205ENST00000535900 PRKAR2AP13861 404 aaKnown RBP12.53□□□□□ -0.4
UBE3B-205ENST00000535900 SMARCA1P28370 1054 aa12.53□□□□□ -0.4
UBE3B-205ENST00000535900 DDIT3P35638 169 aa12.53□□□□□ -0.4
UBE3B-205ENST00000535900 SLC4A3P48751 1232 aa12.53□□□□□ -0.4
UBE3B-205ENST00000535900 HMGN5P82970 282 aaKnown RBP12.53□□□□□ -0.4
UBE3B-205ENST00000535900 ICA1Q05084 483 aa12.53□□□□□ -0.4
UBE3B-205ENST00000535900 TROAPQ12815 778 aa12.53□□□□□ -0.4
UBE3B-205ENST00000535900 TRIM32Q13049 653 aa12.53□□□□□ -0.4
UBE3B-205ENST00000535900 WDR78Q5VTH9 848 aa12.53□□□□□ -0.4
UBE3B-205ENST00000535900 NOL8Q76FK4 1167 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms