RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 KRTAP19-1Q8IUB9 90 aa8.23□□□□□ -1.09
PRKDC-205ENST00000535375 GP6Q9HCN6 339 aa8.23□□□□□ -1.09
PRKDC-205ENST00000535375 FAM53CQ9NYF3 392 aa8.23□□□□□ -1.09
PRKDC-205ENST00000535375 PCDHB10Q9UN67 800 aa8.23□□□□□ -1.09
PRKDC-205ENST00000535375 MRVI1Q9Y6F6 885 aa8.23□□□□□ -1.09
PRKDC-205ENST00000535375 HPXP02790 462 aa8.22□□□□□ -1.09
PRKDC-205ENST00000535375 GLI1P08151 1106 aa8.22□□□□□ -1.09
PRKDC-205ENST00000535375 DNAJA1P31689 397 aaKnown RBP8.22□□□□□ -1.09
PRKDC-205ENST00000535375 BMP8BP34820 402 aa8.22□□□□□ -1.09
PRKDC-205ENST00000535375 ADAT2Q7Z6V5 191 aaKnown RBP8.22□□□□□ -1.09
PRKDC-205ENST00000535375 BRF1Q92994 677 aa8.22□□□□□ -1.09
PRKDC-205ENST00000535375 GBP3Q9H0R5 595 aa8.22□□□□□ -1.09
PRKDC-205ENST00000535375 SF3B6Q9Y3B4 125 aaKnown RBP8.22□□□□□ -1.09
PRKDC-205ENST00000535375 ZNF451Q9Y4E5 1061 aa8.22□□□□□ -1.09
PRKDC-205ENST00000535375 SHOXO15266 292 aa8.21□□□□□ -1.1
PRKDC-205ENST00000535375 YBX3P16989 372 aaKnown RBP eCLIP8.21□□□□□ -1.16e-10■□□□□ 9.6
PRKDC-205ENST00000535375 ZNF445P59923 1031 aa8.21□□□□□ -1.1
PRKDC-205ENST00000535375 CRTC3Q6UUV7 619 aa8.21□□□□□ -1.1
PRKDC-205ENST00000535375 LILRA2Q8N149 483 aa8.21□□□□□ -1.1
PRKDC-205ENST00000535375 FAM169BQ8N8A8 192 aa8.21□□□□□ -1.1
PRKDC-205ENST00000535375 ANKS4BQ8N8V4 417 aa8.21□□□□□ -1.1
PRKDC-205ENST00000535375 HAUS7Q99871 368 aa8.21□□□□□ -1.1
PRKDC-205ENST00000535375 TINF2Q9BSI4 451 aa8.21□□□□□ -1.1
PRKDC-205ENST00000535375 CDADC1Q9BWV3 514 aa8.21□□□□□ -1.1
PRKDC-205ENST00000535375 FHOD1Q9Y613 1164 aa8.21□□□□□ -1.1
PRKDC-205ENST00000535375 LRRC10BA6NIK2 292 aa8.2□□□□□ -1.1
PRKDC-205ENST00000535375 VAV1P15498 845 aa8.2□□□□□ -1.1
PRKDC-205ENST00000535375 TRHRP34981 398 aaPredicted RBP8.2□□□□□ -1.1
PRKDC-205ENST00000535375 CTSKP43235 329 aa8.2□□□□□ -1.1
PRKDC-205ENST00000535375 NOP2P46087 812 aaKnown RBP8.2□□□□□ -1.1
PRKDC-205ENST00000535375 SLC14A2Q15849 920 aa8.2□□□□□ -1.1
PRKDC-205ENST00000535375 TNNI3KQ59H18 835 aa8.2□□□□□ -1.1
PRKDC-205ENST00000535375 VHLLQ6RSH7 139 aa8.2□□□□□ -1.1
PRKDC-205ENST00000535375 FIBCD1Q8N539 461 aa8.2□□□□□ -1.1
PRKDC-205ENST00000535375 C19orf44Q9H6X5 657 aa8.2□□□□□ -1.1
PRKDC-205ENST00000535375 IGSF5Q9NSI5 407 aa8.2□□□□□ -1.1
PRKDC-205ENST00000535375 WHRNQ9P202 907 aa8.2□□□□□ -1.1
PRKDC-205ENST00000535375 A0A087WZG4 1122 aa8.19□□□□□ -1.1
PRKDC-205ENST00000535375 TMEM82A0PJX8 343 aa8.19□□□□□ -1.1
PRKDC-205ENST00000535375 SMAD7O15105 426 aaKnown RBP8.19□□□□□ -1.1
PRKDC-205ENST00000535375 PPM1BO75688 479 aa8.19□□□□□ -1.1
PRKDC-205ENST00000535375 KIAA1211LQ6NV74 962 aa8.19□□□□□ -1.1
PRKDC-205ENST00000535375 SLC43A3Q8NBI5 491 aa8.19□□□□□ -1.1
PRKDC-205ENST00000535375 LINC01599Q8WXQ3 324 aa8.19□□□□□ -1.1
PRKDC-205ENST00000535375 LIN37Q96GY3 246 aaPredicted RBP8.19□□□□□ -1.1
PRKDC-205ENST00000535375 NOL6Q9H6R4 1146 aaKnown RBP8.19□□□□□ -1.1
PRKDC-205ENST00000535375 DIS3Q9Y2L1 958 aaKnown RBP8.19□□□□□ -1.1
PRKDC-205ENST00000535375 ZNF281Q9Y2X9 895 aa8.19□□□□□ -1.1
PRKDC-205ENST00000535375 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.19□□□□□ -1.1
PRKDC-205ENST00000535375 ZNF205O95201 554 aa8.18□□□□□ -1.1
PRKDC-205ENST00000535375 PPP2R5DQ14738 602 aa8.18□□□□□ -1.1
PRKDC-205ENST00000535375 NR0B2Q15466 257 aa8.18□□□□□ -1.1
PRKDC-205ENST00000535375 OGFOD2Q6N063 350 aa8.18□□□□□ -1.1
PRKDC-205ENST00000535375 MAP6Q96JE9 813 aa8.18□□□□□ -1.1
PRKDC-205ENST00000535375 ACTR10Q9NZ32 417 aa8.18□□□□□ -1.1
PRKDC-205ENST00000535375 GPR160Q9UJ42 338 aa8.18□□□□□ -1.1
PRKDC-205ENST00000535375 SUGT1Q9Y2Z0 365 aa8.18□□□□□ -1.1
PRKDC-205ENST00000535375 R3HCC1Q9Y3T6 440 aaKnown RBP8.18□□□□□ -1.1
PRKDC-205ENST00000535375 ZNF503-AS2A6NEH8 195 aa8.17□□□□□ -1.1
PRKDC-205ENST00000535375 H0Y8X5 98 aa8.17□□□□□ -1.1
PRKDC-205ENST00000535375 CBFA2T2O43439 604 aa8.17□□□□□ -1.1
PRKDC-205ENST00000535375 EPHX1P07099 455 aa8.17□□□□□ -1.1
PRKDC-205ENST00000535375 GSTM1P09488 218 aa8.17□□□□□ -1.1
PRKDC-205ENST00000535375 NAT2P11245 290 aa8.17□□□□□ -1.1
PRKDC-205ENST00000535375 KIR2DL1P43626 348 aaPredicted RBP8.17□□□□□ -1.1
PRKDC-205ENST00000535375 KIR2DL2P43627 348 aaPredicted RBP8.17□□□□□ -1.1
PRKDC-205ENST00000535375 POU4F1Q01851 419 aa8.17□□□□□ -1.1
PRKDC-205ENST00000535375 NCAPHQ15003 741 aa8.17□□□□□ -1.1
PRKDC-205ENST00000535375 MLANAQ16655 118 aa8.17□□□□□ -1.1
PRKDC-205ENST00000535375 ZPBP2Q6X784 338 aa8.17□□□□□ -1.1
PRKDC-205ENST00000535375 CEP128Q6ZU80 1094 aa8.17□□□□□ -1.1
PRKDC-205ENST00000535375 NAT16Q8N8M0 369 aa8.17□□□□□ -1.1
PRKDC-205ENST00000535375 ADCY4Q8NFM4 1077 aa8.17□□□□□ -1.1
PRKDC-205ENST00000535375 FCRL2Q96LA5 508 aaPredicted RBP8.17□□□□□ -1.1
PRKDC-205ENST00000535375 FGD4Q96M96 766 aa8.17□□□□□ -1.1
PRKDC-205ENST00000535375 ZDHHC15Q96MV8 337 aa8.17□□□□□ -1.1
PRKDC-205ENST00000535375 G6PC3Q9BUM1 346 aa8.17□□□□□ -1.1
PRKDC-205ENST00000535375 TNFRSF10DQ9UBN6 386 aa8.17□□□□□ -1.1
PRKDC-205ENST00000535375 PRKAG3Q9UGI9 489 aa8.17□□□□□ -1.1
PRKDC-205ENST00000535375 USP2O75604 605 aaPredicted RBP8.16□□□□□ -1.1
PRKDC-205ENST00000535375 ETFBP38117 255 aa8.16□□□□□ -1.1
PRKDC-205ENST00000535375 ZC3H6P61129 1189 aaKnown RBP8.16□□□□□ -1.1
PRKDC-205ENST00000535375 LARP1BQ659C4 914 aaKnown RBP8.16□□□□□ -1.1
PRKDC-205ENST00000535375 MCF2L2Q86YR7 1114 aa8.16□□□□□ -1.1
PRKDC-205ENST00000535375 KLHL6Q8WZ60 621 aa8.16□□□□□ -1.1
PRKDC-205ENST00000535375 APBA2Q99767 749 aa8.16□□□□□ -1.1
PRKDC-205ENST00000535375 RNF32Q9H0A6 362 aa8.16□□□□□ -1.1
PRKDC-205ENST00000535375 KLHL25Q9H0H3 589 aa8.16□□□□□ -1.1
PRKDC-205ENST00000535375 CWC22Q9HCG8 908 aaKnown RBP8.16□□□□□ -1.1
PRKDC-205ENST00000535375 AP5S1Q9NUS5 200 aa8.16□□□□□ -1.1
PRKDC-205ENST00000535375 EBF1Q9UH73 591 aa8.16□□□□□ -1.1
PRKDC-205ENST00000535375 ANKRD34BA5PLL1 514 aa8.15□□□□□ -1.1
PRKDC-205ENST00000535375 FARP2O94887 1054 aaPredicted RBP8.15□□□□□ -1.1
PRKDC-205ENST00000535375 FGRP09769 529 aa8.15□□□□□ -1.1
PRKDC-205ENST00000535375 RTP1P59025 263 aa8.15□□□□□ -1.1
PRKDC-205ENST00000535375 SNX17Q15036 470 aa8.15□□□□□ -1.1
PRKDC-205ENST00000535375 HHIPL1Q96JK4 782 aa8.15□□□□□ -1.1
PRKDC-205ENST00000535375 SLC12A9Q9BXP2 914 aa8.15□□□□□ -1.1
PRKDC-205ENST00000535375 ZNF408Q9H9D4 720 aa8.15□□□□□ -1.1
PRKDC-205ENST00000535375 CD3EP07766 207 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms