RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 NAA25Q14CX7 972 aa19.99■□□□□ 0.79
SFSWAP-203ENST00000535236 CMTR1Q8N1G2 835 aaKnown RBP19.99■□□□□ 0.79
SFSWAP-203ENST00000535236 PANK4Q9NVE7 773 aa19.99■□□□□ 0.79
SFSWAP-203ENST00000535236 MIS12Q9H081 205 aa19.99■□□□□ 0.79
SFSWAP-203ENST00000535236 MUM1L1Q5H9M0 696 aa19.99■□□□□ 0.79
SFSWAP-203ENST00000535236 HAUS1Q96CS2 278 aa19.99■□□□□ 0.79
SFSWAP-203ENST00000535236 KRT12Q99456 494 aa19.99■□□□□ 0.79
SFSWAP-203ENST00000535236 DDX25Q9UHL0 483 aaKnown RBP19.99■□□□□ 0.79
SFSWAP-203ENST00000535236 IFNB1P01574 187 aa19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 FAM160B1Q5W0V3 765 aa19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 KRT26Q7Z3Y9 468 aa19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 NEK8Q86SG6 692 aa19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 PLA2G4DQ86XP0 818 aa19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 SDR42E1Q8WUS8 393 aa19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 RIC8AQ9NPQ8 531 aa19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 KLRF2D3W0D1 207 aa19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 TMEM191BP0C7N4 346 aa19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 BCAMP50895 628 aa19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 MYSM1Q5VVJ2 828 aa19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 RTEL1Q9NZ71 1219 aa19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 THRAP3Q9Y2W1 955 aaKnown RBP19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 KDRP35968 1356 aa19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 KCNJ18B7U540 433 aa19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 KCNJ12Q14500 433 aa19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 RPS6KA2Q15349 733 aa19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 NOSTRINQ8IVI9 506 aa19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 RILPQ96NA2 401 aa19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 NOC2LQ9Y3T9 749 aaKnown RBP19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 OR52Z1P0C646 297 aa19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 PDE6CP51160 858 aa19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 DMP1Q13316 513 aaPredicted RBP19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 FAM178BQ8IXR5 827 aa19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 ZBTB38Q8NAP3 1195 aaPredicted RBP19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 ZNF274Q96GC6 653 aaPredicted RBP19.98■□□□□ 0.79
SFSWAP-203ENST00000535236 POLGP54098 1239 aaPredicted RBP19.97■□□□□ 0.79
SFSWAP-203ENST00000535236 GBP6Q6ZN66 633 aa19.97■□□□□ 0.79
SFSWAP-203ENST00000535236 ARMCX3Q9UH62 379 aaPredicted RBP19.97■□□□□ 0.79
SFSWAP-203ENST00000535236 ANKRD20A3Q5VUR7 823 aa19.97■□□□□ 0.79
SFSWAP-203ENST00000535236 LMNTD2Q8IXW0 634 aa19.97■□□□□ 0.79
SFSWAP-203ENST00000535236 GRK7Q8WTQ7 553 aa19.97■□□□□ 0.79
SFSWAP-203ENST00000535236 CCDC51Q96ER9 411 aa19.97■□□□□ 0.79
SFSWAP-203ENST00000535236 TTC36A6NLP5 189 aa19.97■□□□□ 0.79
SFSWAP-203ENST00000535236 GOLGA8HP0CJ92 632 aa19.97■□□□□ 0.79
SFSWAP-203ENST00000535236 SLFN13Q68D06 897 aa19.97■□□□□ 0.79
SFSWAP-203ENST00000535236 FANCBQ8NB91 859 aa19.97■□□□□ 0.79
SFSWAP-203ENST00000535236 TM6SF1Q9BZW5 370 aa19.97■□□□□ 0.79
SFSWAP-203ENST00000535236 PDE6AP16499 860 aa19.97■□□□□ 0.79
SFSWAP-203ENST00000535236 C10orf67Q8IYJ2 551 aa19.97■□□□□ 0.79
SFSWAP-203ENST00000535236 CCPG1Q9ULG6 757 aa19.97■□□□□ 0.79
SFSWAP-203ENST00000535236 TNKSO95271 1327 aa19.97■□□□□ 0.79
SFSWAP-203ENST00000535236 TMEM232C9JQI7 657 aa19.97■□□□□ 0.79
SFSWAP-203ENST00000535236 WDR46O15213 610 aaKnown RBP19.97■□□□□ 0.79
SFSWAP-203ENST00000535236 IGBP1P78318 339 aa19.97■□□□□ 0.79
SFSWAP-203ENST00000535236 GALNT17Q6IS24 598 aa19.97■□□□□ 0.79
SFSWAP-203ENST00000535236 EDC3Q96F86 508 aaKnown RBP19.97■□□□□ 0.79
SFSWAP-203ENST00000535236 PHBP35232 272 aa19.96■□□□□ 0.79
SFSWAP-203ENST00000535236 POLA2Q14181 598 aa19.96■□□□□ 0.79
SFSWAP-203ENST00000535236 KRBA2Q6ZNG9 492 aa19.96■□□□□ 0.79
SFSWAP-203ENST00000535236 SEPT10Q9P0V9 454 aa19.96■□□□□ 0.79
SFSWAP-203ENST00000535236 MORC3Q14149 939 aa19.96■□□□□ 0.79
SFSWAP-203ENST00000535236 KRT71Q3SY84 523 aa19.96■□□□□ 0.79
SFSWAP-203ENST00000535236 PFDN6O15212 129 aa19.96■□□□□ 0.79
SFSWAP-203ENST00000535236 PHKG2P15735 406 aa19.96■□□□□ 0.79
SFSWAP-203ENST00000535236 ARMCX5Q6P1M9 558 aa19.96■□□□□ 0.79
SFSWAP-203ENST00000535236 LRRIQ4A6NIV6 560 aa19.96■□□□□ 0.79
SFSWAP-203ENST00000535236 DLATP10515 647 aaKnown RBP19.96■□□□□ 0.79
SFSWAP-203ENST00000535236 SCG2P13521 617 aa19.96■□□□□ 0.79
SFSWAP-203ENST00000535236 LARSQ9P2J5 1176 aaKnown RBP19.96■□□□□ 0.79
SFSWAP-203ENST00000535236 COL4A3BPQ9Y5P4 624 aa19.96■□□□□ 0.79
SFSWAP-203ENST00000535236 GADD45BO75293 160 aaPredicted RBP19.95■□□□□ 0.78
SFSWAP-203ENST00000535236 PFKFB1P16118 471 aa19.95■□□□□ 0.78
SFSWAP-203ENST00000535236 PPARDQ03181 441 aa19.95■□□□□ 0.78
SFSWAP-203ENST00000535236 CHRNDQ07001 517 aa19.95■□□□□ 0.78
SFSWAP-203ENST00000535236 ABCB5Q2M3G0 1257 aa19.95■□□□□ 0.78
SFSWAP-203ENST00000535236 ADALQ6DHV7 355 aa19.95■□□□□ 0.78
SFSWAP-203ENST00000535236 ZMYM6O95789 1325 aa19.95■□□□□ 0.78
SFSWAP-203ENST00000535236 DDAH1O94760 285 aa19.95■□□□□ 0.78
SFSWAP-203ENST00000535236 DTNBO60941 627 aa19.95■□□□□ 0.78
SFSWAP-203ENST00000535236 PPP4R1Q8TF05 950 aa19.95■□□□□ 0.78
SFSWAP-203ENST00000535236 GPKOWQ92917 476 aaPredicted RBP eCLIP19.95■□□□□ 0.788e-8■■■■■ 30.4
SFSWAP-203ENST00000535236 CABS1Q96KC9 395 aa19.95■□□□□ 0.78
SFSWAP-203ENST00000535236 KCTD2Q14681 263 aa19.94■□□□□ 0.78
SFSWAP-203ENST00000535236 RPS6KC1Q96S38 1066 aa19.94■□□□□ 0.78
SFSWAP-203ENST00000535236 PCCAP05165 728 aaPredicted RBP19.94■□□□□ 0.78
SFSWAP-203ENST00000535236 ADCY8P40145 1251 aa19.94■□□□□ 0.78
SFSWAP-203ENST00000535236 C4orf50Q6ZRC1 276 aa19.94■□□□□ 0.78
SFSWAP-203ENST00000535236 CEP120Q8N960 986 aa19.94■□□□□ 0.78
SFSWAP-203ENST00000535236 PPFIA1Q13136 1202 aa19.94■□□□□ 0.78
SFSWAP-203ENST00000535236 TFDP1Q14186 410 aa19.94■□□□□ 0.78
SFSWAP-203ENST00000535236 ME3Q16798 604 aa19.94■□□□□ 0.78
SFSWAP-203ENST00000535236 NLGN1Q8N2Q7 840 aa19.94■□□□□ 0.78
SFSWAP-203ENST00000535236 ANKRD42Q8N9B4 389 aa19.94■□□□□ 0.78
SFSWAP-203ENST00000535236 MIPOL1Q8TD10 442 aa19.94■□□□□ 0.78
SFSWAP-203ENST00000535236 ANKFY1Q9P2R3 1169 aa19.94■□□□□ 0.78
SFSWAP-203ENST00000535236 ESYT2A0FGR8 921 aa19.94■□□□□ 0.78
SFSWAP-203ENST00000535236 POLR2BP30876 1174 aaKnown RBP19.94■□□□□ 0.78
SFSWAP-203ENST00000535236 INPP5BP32019 993 aa19.94■□□□□ 0.78
SFSWAP-203ENST00000535236 TRIM58Q8NG06 486 aa19.94■□□□□ 0.78
SFSWAP-203ENST00000535236 OR8K1Q8NGG5 319 aa19.94■□□□□ 0.78
SFSWAP-203ENST00000535236 KIAA0232Q92628 1395 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms