RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 QSER1Q2KHR3 1735 aa6.91□□□□□ -1.3
CHKA-208ENST00000533910 RPS6KA4O75676 772 aa6.91□□□□□ -1.3
CHKA-208ENST00000533910 GPTP24298 496 aa6.91□□□□□ -1.3
CHKA-208ENST00000533910 GAS6Q14393 721 aa6.91□□□□□ -1.3
CHKA-208ENST00000533910 TAF1CQ15572 869 aaPredicted RBP6.91□□□□□ -1.3
CHKA-208ENST00000533910 PARP10Q53GL7 1025 aa6.91□□□□□ -1.3
CHKA-208ENST00000533910 TSHZ3Q63HK5 1081 aa6.91□□□□□ -1.3
CHKA-208ENST00000533910 LYPD4Q6UWN0 246 aa6.91□□□□□ -1.3
CHKA-208ENST00000533910 CLEC4GQ6UXB4 293 aa6.91□□□□□ -1.3
CHKA-208ENST00000533910 ATG9AQ7Z3C6 839 aa6.91□□□□□ -1.3
CHKA-208ENST00000533910 KLHDC4Q8TBB5 520 aa6.91□□□□□ -1.3
CHKA-208ENST00000533910 BHMTQ93088 406 aa6.91□□□□□ -1.3
CHKA-208ENST00000533910 HHIPQ96QV1 700 aa6.91□□□□□ -1.3
CHKA-208ENST00000533910 TRIM56Q9BRZ2 755 aaKnown RBP6.91□□□□□ -1.3
CHKA-208ENST00000533910 TGIF2Q9GZN2 237 aa6.91□□□□□ -1.3
CHKA-208ENST00000533910 EHD4Q9H223 541 aa6.91□□□□□ -1.3
CHKA-208ENST00000533910 SRA1Q9HD15 236 aaKnown RBP6.91□□□□□ -1.3
CHKA-208ENST00000533910 GGT7Q9UJ14 662 aa6.91□□□□□ -1.3
CHKA-208ENST00000533910 SALL4Q9UJQ4 1053 aa6.91□□□□□ -1.3
CHKA-208ENST00000533910 ZNF652Q9Y2D9 606 aa6.91□□□□□ -1.3
CHKA-208ENST00000533910 EYA2O00167 538 aa6.9□□□□□ -1.3
CHKA-208ENST00000533910 FBXO24O75426 580 aa6.9□□□□□ -1.3
CHKA-208ENST00000533910 GLRX3O76003 335 aaKnown RBP6.9□□□□□ -1.3
CHKA-208ENST00000533910 NTSR2O95665 410 aa6.9□□□□□ -1.3
CHKA-208ENST00000533910 CELA2BP08218 269 aaPredicted RBP6.9□□□□□ -1.3
CHKA-208ENST00000533910 FAM157BP0CG42 384 aa6.9□□□□□ -1.3
CHKA-208ENST00000533910 IL15P40933 162 aaPredicted RBP6.9□□□□□ -1.3
CHKA-208ENST00000533910 FCGRTP55899 365 aa6.9□□□□□ -1.3
CHKA-208ENST00000533910 CTSWP56202 376 aa6.9□□□□□ -1.3
CHKA-208ENST00000533910 KCNQ4P56696 695 aa6.9□□□□□ -1.3
CHKA-208ENST00000533910 MLLT1Q03111 559 aaPredicted RBP6.9□□□□□ -1.3
CHKA-208ENST00000533910 USP48Q86UV5 1035 aa6.9□□□□□ -1.3
CHKA-208ENST00000533910 AACSQ86V21 672 aa6.9□□□□□ -1.3
CHKA-208ENST00000533910 GTPBP3Q969Y2 492 aaKnown RBP6.9□□□□□ -1.3
CHKA-208ENST00000533910 EAF2Q96CJ1 260 aaPredicted RBP6.9□□□□□ -1.3
CHKA-208ENST00000533910 FAM89AQ96GI7 184 aa6.9□□□□□ -1.3
CHKA-208ENST00000533910 GPATCH3Q96I76 525 aa6.9□□□□□ -1.3
CHKA-208ENST00000533910 NSUN5Q96P11 429 aaKnown RBP6.9□□□□□ -1.3
CHKA-208ENST00000533910 SIL1Q9H173 461 aa6.9□□□□□ -1.3
CHKA-208ENST00000533910 SUV39H2Q9H5I1 410 aa6.9□□□□□ -1.3
CHKA-208ENST00000533910 GPR108Q9NPR9 543 aa6.9□□□□□ -1.3
CHKA-208ENST00000533910 ECHDC1Q9NTX5 307 aa6.9□□□□□ -1.3
CHKA-208ENST00000533910 FAM8A1Q9UBU6 413 aa6.9□□□□□ -1.3
CHKA-208ENST00000533910 NARFQ9UHQ1 456 aa6.9□□□□□ -1.3
CHKA-208ENST00000533910 TRMT112Q9UI30 125 aaKnown RBP6.9□□□□□ -1.3
CHKA-208ENST00000533910 DDX41Q9UJV9 622 aaKnown RBP6.9□□□□□ -1.3
CHKA-208ENST00000533910 NSFL1CQ9UNZ2 370 aaKnown RBP6.9□□□□□ -1.3
CHKA-208ENST00000533910 SH3TC1Q8TE82 1336 aa6.9□□□□□ -1.3
CHKA-208ENST00000533910 RFX7Q2KHR2 1363 aa6.9□□□□□ -1.31
CHKA-208ENST00000533910 COL4A1P02462 1669 aa6.9□□□□□ -1.31
CHKA-208ENST00000533910 MYH7P12883 1935 aa6.89□□□□□ -1.31
CHKA-208ENST00000533910 METTL12A8MUP2 240 aa6.89□□□□□ -1.31
CHKA-208ENST00000533910 GPR25O00155 361 aa6.89□□□□□ -1.31
CHKA-208ENST00000533910 IRS4O14654 1257 aaPredicted RBP6.89□□□□□ -1.31
CHKA-208ENST00000533910 ERC2O15083 957 aa6.89□□□□□ -1.31
CHKA-208ENST00000533910 PDE8AO60658 829 aa6.89□□□□□ -1.31
CHKA-208ENST00000533910 IGHA1P01876 353 aa6.89□□□□□ -1.31
CHKA-208ENST00000533910 IFIT2P09913 472 aaKnown RBP6.89□□□□□ -1.31
CHKA-208ENST00000533910 SPEM2Q0P670 501 aa6.89□□□□□ -1.31
CHKA-208ENST00000533910 TFCP2Q12800 502 aa6.89□□□□□ -1.31
CHKA-208ENST00000533910 TNNI3KQ59H18 835 aa6.89□□□□□ -1.31
CHKA-208ENST00000533910 SUSD4Q5VX71 490 aa6.89□□□□□ -1.31
CHKA-208ENST00000533910 CASC1Q6TDU7 716 aa6.89□□□□□ -1.31
CHKA-208ENST00000533910 HFE2Q6ZVN8 426 aa6.89□□□□□ -1.31
CHKA-208ENST00000533910 OR13H1Q8NG92 308 aa6.89□□□□□ -1.31
CHKA-208ENST00000533910 TTLL11Q8NHH1 800 aa6.89□□□□□ -1.31
CHKA-208ENST00000533910 DHX38Q92620 1227 aaKnown RBP6.89□□□□□ -1.31
CHKA-208ENST00000533910 PNMA5Q96PV4 448 aa6.89□□□□□ -1.31
CHKA-208ENST00000533910 UTP14AQ9BVJ6 771 aaKnown RBP6.89□□□□□ -1.31
CHKA-208ENST00000533910 C22orf23Q9BZE7 217 aa6.89□□□□□ -1.31
CHKA-208ENST00000533910 IGFLR1Q9H665 355 aa6.89□□□□□ -1.31
CHKA-208ENST00000533910 TLR7Q9NYK1 1049 aaKnown RBP6.89□□□□□ -1.31
CHKA-208ENST00000533910 DBNLQ9UJU6 430 aaKnown RBP6.89□□□□□ -1.31
CHKA-208ENST00000533910 FPGT-TNNI3KV9GXZ4 949 aa6.89□□□□□ -1.31
CHKA-208ENST00000533910 ABCC12Q96J65 1359 aa6.89□□□□□ -1.31
CHKA-208ENST00000533910 NRXN2Q9P2S2 1712 aa6.89□□□□□ -1.31
CHKA-208ENST00000533910 AKAP11Q9UKA4 1901 aa6.89□□□□□ -1.31
CHKA-208ENST00000533910 DOCK2Q92608 1830 aa6.88□□□□□ -1.31
CHKA-208ENST00000533910 PHF20L1A8MW92 1017 aa6.88□□□□□ -1.31
CHKA-208ENST00000533910 J3QW42 95 aa6.88□□□□□ -1.31
CHKA-208ENST00000533910 CHMLP26374 656 aa6.88□□□□□ -1.31
CHKA-208ENST00000533910 HMGB2P26583 209 aaKnown RBP6.88□□□□□ -1.31
CHKA-208ENST00000533910 IFIT5Q13325 482 aaKnown RBP6.88□□□□□ -1.31
CHKA-208ENST00000533910 SUZ12Q15022 739 aaKnown RBP6.88□□□□□ -1.31
CHKA-208ENST00000533910 MAP3K11Q16584 847 aa6.88□□□□□ -1.31
CHKA-208ENST00000533910 CCDC57Q2TAC2 916 aa6.88□□□□□ -1.31
CHKA-208ENST00000533910 KIAA0319Q5VV43 1072 aa6.88□□□□□ -1.31
CHKA-208ENST00000533910 AMIGO3Q86WK7 504 aa6.88□□□□□ -1.31
CHKA-208ENST00000533910 NCAPG2Q86XI2 1143 aa6.88□□□□□ -1.31
CHKA-208ENST00000533910 CERS3Q8IU89 383 aa6.88□□□□□ -1.31
CHKA-208ENST00000533910 CNTROBQ8N137 903 aa6.88□□□□□ -1.31
CHKA-208ENST00000533910 SYNE4Q8N205 404 aa6.88□□□□□ -1.31
CHKA-208ENST00000533910 C3orf58Q8NDZ4 430 aa6.88□□□□□ -1.31
CHKA-208ENST00000533910 ZKSCAN3Q9BRR0 538 aa6.88□□□□□ -1.31
CHKA-208ENST00000533910 TANGO6Q9C0B7 1094 aa6.88□□□□□ -1.31
CHKA-208ENST00000533910 GREM2Q9H772 168 aa6.88□□□□□ -1.31
CHKA-208ENST00000533910 CWC22Q9HCG8 908 aaKnown RBP6.88□□□□□ -1.31
CHKA-208ENST00000533910 LRRC4BQ9NT99 713 aa6.88□□□□□ -1.31
CHKA-208ENST00000533910 NDFIP2Q9NV92 336 aa6.88□□□□□ -1.31
CHKA-208ENST00000533910 MARK1Q9P0L2 795 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms