RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ZBED4O75132 1171 aa14.03□□□□□ -0.16
SSBP3-214ENST00000533209 GOLGA8HP0CJ92 632 aa14.03□□□□□ -0.16
SSBP3-214ENST00000533209 MAPK4P31152 587 aa14.03□□□□□ -0.16
SSBP3-214ENST00000533209 SLC16A2P36021 539 aa14.03□□□□□ -0.16
SSBP3-214ENST00000533209 IKQ13123 557 aaPredicted RBP14.03□□□□□ -0.16
SSBP3-214ENST00000533209 PKN2Q16513 984 aaKnown RBP14.03□□□□□ -0.16
SSBP3-214ENST00000533209 GPATCH4Q5T3I0 446 aaKnown RBP14.03□□□□□ -0.16
SSBP3-214ENST00000533209 DHX32Q7L7V1 743 aaKnown RBP14.03□□□□□ -0.16
SSBP3-214ENST00000533209 JAKMIP1Q96N16 626 aaKnown RBP14.03□□□□□ -0.16
SSBP3-214ENST00000533209 LRRC2Q9BYS8 371 aa14.03□□□□□ -0.16
SSBP3-214ENST00000533209 PRR12Q9ULL5 1215 aa14.03□□□□□ -0.16
SSBP3-214ENST00000533209 PARP14Q460N5 1801 aa14.03□□□□□ -0.16
SSBP3-214ENST00000533209 ATP2A1O14983 1001 aa14.02□□□□□ -0.17
SSBP3-214ENST00000533209 HMGB1P09429 215 aaKnown RBP14.02□□□□□ -0.17
SSBP3-214ENST00000533209 FDX1P10109 184 aa14.02□□□□□ -0.17
SSBP3-214ENST00000533209 CPA1P15085 419 aa14.02□□□□□ -0.17
SSBP3-214ENST00000533209 HOXD10P28358 340 aa14.02□□□□□ -0.17
SSBP3-214ENST00000533209 STAT3P40763 770 aa14.02□□□□□ -0.17
SSBP3-214ENST00000533209 LIFRP42702 1097 aa14.02□□□□□ -0.17
SSBP3-214ENST00000533209 PRMT2P55345 433 aa14.02□□□□□ -0.17
SSBP3-214ENST00000533209 PRKCZQ05513 592 aa14.02□□□□□ -0.17
SSBP3-214ENST00000533209 TROAPQ12815 778 aa14.02□□□□□ -0.17
SSBP3-214ENST00000533209 PLS1Q14651 629 aa14.02□□□□□ -0.17
SSBP3-214ENST00000533209 SYDE2Q5VT97 1194 aa14.02□□□□□ -0.17
SSBP3-214ENST00000533209 FBXO46Q6PJ61 603 aaPredicted RBP14.02□□□□□ -0.17
SSBP3-214ENST00000533209 GPR142Q7Z601 462 aa14.02□□□□□ -0.17
SSBP3-214ENST00000533209 PLEKHH3Q7Z736 793 aa14.02□□□□□ -0.17
SSBP3-214ENST00000533209 RIOX2Q8IUF8 465 aa14.02□□□□□ -0.17
SSBP3-214ENST00000533209 TNS4Q8IZW8 715 aa14.02□□□□□ -0.17
SSBP3-214ENST00000533209 SHCBP1Q8NEM2 672 aa14.02□□□□□ -0.17
SSBP3-214ENST00000533209 COA7Q96BR5 231 aa14.02□□□□□ -0.17
SSBP3-214ENST00000533209 TCEANC2Q96MN5 208 aa14.02□□□□□ -0.17
SSBP3-214ENST00000533209 GJD2Q9UKL4 321 aa14.02□□□□□ -0.17
SSBP3-214ENST00000533209 GABRQQ9UN88 632 aa14.02□□□□□ -0.17
SSBP3-214ENST00000533209 PTCH2Q9Y6C5 1203 aa14.02□□□□□ -0.17
SSBP3-214ENST00000533209 ZNF536O15090 1300 aa14.01□□□□□ -0.17
SSBP3-214ENST00000533209 EIF5BO60841 1220 aaKnown RBP14.01□□□□□ -0.17
SSBP3-214ENST00000533209 PARP1P09874 1014 aaKnown RBP14.01□□□□□ -0.17
SSBP3-214ENST00000533209 ERCC3P19447 782 aa14.01□□□□□ -0.17
SSBP3-214ENST00000533209 SNAP25P60880 206 aa14.01□□□□□ -0.17
SSBP3-214ENST00000533209 ASPRV1Q53RT3 343 aa14.01□□□□□ -0.17
SSBP3-214ENST00000533209 BLOC1S2Q6QNY1 142 aa14.01□□□□□ -0.17
SSBP3-214ENST00000533209 CCAR1Q8IX12 1150 aaKnown RBP14.01□□□□□ -0.17
SSBP3-214ENST00000533209 ZNF654Q8IZM8 581 aa14.01□□□□□ -0.17
SSBP3-214ENST00000533209 TMTC2Q8N394 836 aa14.01□□□□□ -0.17
SSBP3-214ENST00000533209 UBA5Q9GZZ9 404 aa14.01□□□□□ -0.17
SSBP3-214ENST00000533209 CPVLQ9H3G5 476 aa14.01□□□□□ -0.17
SSBP3-214ENST00000533209 RAVER2Q9HCJ3 691 aaKnown RBP14.01□□□□□ -0.17
SSBP3-214ENST00000533209 MAD2L2Q9UI95 211 aa14.01□□□□□ -0.17
SSBP3-214ENST00000533209 PALM3A6NDB9 673 aaPredicted RBP14□□□□□ -0.17
SSBP3-214ENST00000533209 SLC25A27O95847 323 aa14□□□□□ -0.17
SSBP3-214ENST00000533209 CASTP20810 708 aaKnown RBP14□□□□□ -0.17
SSBP3-214ENST00000533209 PSMA5P28066 241 aa14□□□□□ -0.17
SSBP3-214ENST00000533209 FLT3LGP49771 235 aa14□□□□□ -0.17
SSBP3-214ENST00000533209 OAZ1P54368 228 aa14□□□□□ -0.17
SSBP3-214ENST00000533209 GRM4Q14833 912 aa14□□□□□ -0.17
SSBP3-214ENST00000533209 MORN1Q5T089 497 aa14□□□□□ -0.17
SSBP3-214ENST00000533209 WDR78Q5VTH9 848 aa14□□□□□ -0.17
SSBP3-214ENST00000533209 SNRNP48Q6IEG0 339 aaKnown RBP14□□□□□ -0.17
SSBP3-214ENST00000533209 NFXL1Q6ZNB6 911 aa14□□□□□ -0.17
SSBP3-214ENST00000533209 CATIPQ7Z7H3 387 aa14□□□□□ -0.17
SSBP3-214ENST00000533209 SGMS1Q86VZ5 419 aa14□□□□□ -0.17
SSBP3-214ENST00000533209 NCAPG2Q86XI2 1143 aa14□□□□□ -0.17
SSBP3-214ENST00000533209 CPXCR1Q8N123 301 aa14□□□□□ -0.17
SSBP3-214ENST00000533209 STAG2Q8N3U4 1231 aa14□□□□□ -0.17
SSBP3-214ENST00000533209 USP6NLQ92738 828 aa14□□□□□ -0.17
SSBP3-214ENST00000533209 MYL10Q9BUA6 226 aa14□□□□□ -0.17
SSBP3-214ENST00000533209 TEX13BQ9BXU2 312 aa14□□□□□ -0.17
SSBP3-214ENST00000533209 RANBP17Q9H2T7 1088 aaKnown RBP14□□□□□ -0.17
SSBP3-214ENST00000533209 MROH8Q9H579 483 aa14□□□□□ -0.17
SSBP3-214ENST00000533209 ZSWIM6Q9HCJ5 1215 aa14□□□□□ -0.17
SSBP3-214ENST00000533209 RIPK3Q9Y572 518 aa14□□□□□ -0.17
SSBP3-214ENST00000533209 CTDP1Q9Y5B0 961 aaPredicted RBP14□□□□□ -0.17
SSBP3-214ENST00000533209 CCDC69A6NI79 296 aa13.99□□□□□ -0.17
SSBP3-214ENST00000533209 SLC15A5A6NIM6 579 aa13.99□□□□□ -0.17
SSBP3-214ENST00000533209 DDAH1O94760 285 aa13.99□□□□□ -0.17
SSBP3-214ENST00000533209 RPS6KB1P23443 525 aa13.99□□□□□ -0.17
SSBP3-214ENST00000533209 PTPREP23469 700 aa13.99□□□□□ -0.17
SSBP3-214ENST00000533209 AGBL1Q96MI9 1066 aa13.99□□□□□ -0.17
SSBP3-214ENST00000533209 MAP3K14Q99558 947 aa13.99□□□□□ -0.17
SSBP3-214ENST00000533209 TM6SF1Q9BZW5 370 aa13.99□□□□□ -0.17
SSBP3-214ENST00000533209 CWC22Q9HCG8 908 aaKnown RBP13.99□□□□□ -0.17
SSBP3-214ENST00000533209 MGAMO43451 1857 aa13.98□□□□□ -0.17
SSBP3-214ENST00000533209 KLRF2D3W0D1 207 aa13.98□□□□□ -0.17
SSBP3-214ENST00000533209 STRNO43815 780 aa13.98□□□□□ -0.17
SSBP3-214ENST00000533209 COPB2P35606 906 aa13.98□□□□□ -0.17
SSBP3-214ENST00000533209 ANAPC15P60006 121 aa13.98□□□□□ -0.17
SSBP3-214ENST00000533209 IRF5Q13568 498 aa13.98□□□□□ -0.17
SSBP3-214ENST00000533209 GRB14Q14449 540 aa13.98□□□□□ -0.17
SSBP3-214ENST00000533209 SLC35G1Q2M3R5 365 aa13.98□□□□□ -0.17
SSBP3-214ENST00000533209 CCDC174Q6PII3 467 aa13.98□□□□□ -0.17
SSBP3-214ENST00000533209 Q6ZUG5 572 aa13.98□□□□□ -0.17
SSBP3-214ENST00000533209 RUFY3Q7L099 469 aa13.98□□□□□ -0.17
SSBP3-214ENST00000533209 ADGRF4Q8IZF3 695 aa13.98□□□□□ -0.17
SSBP3-214ENST00000533209 RAET1EQ8TD07 263 aa13.98□□□□□ -0.17
SSBP3-214ENST00000533209 NUP133Q8WUM0 1156 aa13.98□□□□□ -0.17
SSBP3-214ENST00000533209 SOCS4Q8WXH5 440 aa13.98□□□□□ -0.17
SSBP3-214ENST00000533209 IL17RAQ96F46 866 aa13.98□□□□□ -0.17
SSBP3-214ENST00000533209 NUDT12Q9BQG2 462 aa13.98□□□□□ -0.17
SSBP3-214ENST00000533209 AGXT2Q9BYV1 514 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms