RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 AKR1B15C9JRZ8 316 aaPredicted RBP11.86□□□□□ -0.51
COLCA1-203ENST00000532918 KIF3CO14782 793 aa11.86□□□□□ -0.51
COLCA1-203ENST00000532918 GPBP1Q86WP2 473 aa11.86□□□□□ -0.51
COLCA1-203ENST00000532918 CCT6BQ92526 530 aa11.86□□□□□ -0.51
COLCA1-203ENST00000532918 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.86□□□□□ -0.51
COLCA1-203ENST00000532918 V9GYY5 206 aaPredicted RBP11.86□□□□□ -0.51
COLCA1-203ENST00000532918 TTC31Q49AM3 519 aaPredicted RBP11.86□□□□□ -0.51
COLCA1-203ENST00000532918 COA7Q96BR5 231 aa11.86□□□□□ -0.51
COLCA1-203ENST00000532918 ZNF341Q9BYN7 854 aa11.86□□□□□ -0.51
COLCA1-203ENST00000532918 HESX1Q9UBX0 185 aa11.86□□□□□ -0.51
COLCA1-203ENST00000532918 FAM184BQ9ULE4 1060 aa11.86□□□□□ -0.51
COLCA1-203ENST00000532918 NDUFB9Q9Y6M9 179 aa11.86□□□□□ -0.51
COLCA1-203ENST00000532918 SYNRGQ9UMZ2 1314 aa11.86□□□□□ -0.51
COLCA1-203ENST00000532918 TLR3O15455 904 aaKnown RBP11.86□□□□□ -0.51
COLCA1-203ENST00000532918 CCDC84Q86UT8 332 aaPredicted RBP11.86□□□□□ -0.51
COLCA1-203ENST00000532918 METTL23Q86XA0 190 aa11.86□□□□□ -0.51
COLCA1-203ENST00000532918 NACC1Q96RE7 527 aa11.86□□□□□ -0.51
COLCA1-203ENST00000532918 ANO3Q9BYT9 981 aa11.86□□□□□ -0.51
COLCA1-203ENST00000532918 FBXO40Q9UH90 709 aa11.86□□□□□ -0.51
COLCA1-203ENST00000532918 COL4A3BPQ9Y5P4 624 aa11.86□□□□□ -0.51
COLCA1-203ENST00000532918 ZMYM6O95789 1325 aa11.86□□□□□ -0.51
COLCA1-203ENST00000532918 GOLGA6CA6NDK9 693 aa11.86□□□□□ -0.51
COLCA1-203ENST00000532918 GOLGA6BA6NDN3 693 aa11.86□□□□□ -0.51
COLCA1-203ENST00000532918 ZBTB7AO95365 584 aa11.86□□□□□ -0.51
COLCA1-203ENST00000532918 GOLGA6DP0CG33 693 aa11.86□□□□□ -0.51
COLCA1-203ENST00000532918 STAT2P52630 851 aa11.86□□□□□ -0.51
COLCA1-203ENST00000532918 SLC9C1Q4G0N8 1177 aa11.86□□□□□ -0.51
COLCA1-203ENST00000532918 PODNQ7Z5L7 613 aa11.86□□□□□ -0.51
COLCA1-203ENST00000532918 GOLGA6AQ9NYA3 693 aa11.86□□□□□ -0.51
COLCA1-203ENST00000532918 KCNJ14Q9UNX9 436 aa11.86□□□□□ -0.51
COLCA1-203ENST00000532918 SSH2Q76I76 1423 aa11.85□□□□□ -0.51
COLCA1-203ENST00000532918 OATP04181 439 aa11.85□□□□□ -0.51
COLCA1-203ENST00000532918 ASNSP08243 561 aa11.85□□□□□ -0.51
COLCA1-203ENST00000532918 IGBP1P78318 339 aa11.85□□□□□ -0.51
COLCA1-203ENST00000532918 EAF2Q96CJ1 260 aaPredicted RBP11.85□□□□□ -0.51
COLCA1-203ENST00000532918 NUB1Q9Y5A7 615 aa11.85□□□□□ -0.51
COLCA1-203ENST00000532918 OPA1O60313 960 aa11.85□□□□□ -0.51
COLCA1-203ENST00000532918 OR52Z1P0C646 297 aa11.85□□□□□ -0.51
COLCA1-203ENST00000532918 CPA1P15085 419 aa11.85□□□□□ -0.51
COLCA1-203ENST00000532918 PDZD4Q76G19 769 aaPredicted RBP11.85□□□□□ -0.51
COLCA1-203ENST00000532918 WDR11Q9BZH6 1224 aa11.85□□□□□ -0.51
COLCA1-203ENST00000532918 ZNF277Q9NRM2 450 aaPredicted RBP11.85□□□□□ -0.51
COLCA1-203ENST00000532918 KDM2BQ8NHM5 1336 aa11.85□□□□□ -0.51
COLCA1-203ENST00000532918 TMEM191BP0C7N4 346 aa11.85□□□□□ -0.51
COLCA1-203ENST00000532918 HSPD1P10809 573 aaKnown RBP11.85□□□□□ -0.51
COLCA1-203ENST00000532918 SLC7A3Q8WY07 619 aa11.85□□□□□ -0.51
COLCA1-203ENST00000532918 SEC31BQ9NQW1 1179 aa11.85□□□□□ -0.51
COLCA1-203ENST00000532918 GUCA1BQ9UMX6 200 aa11.85□□□□□ -0.51
COLCA1-203ENST00000532918 TYW5A2RUC4 315 aaKnown RBP11.85□□□□□ -0.51
COLCA1-203ENST00000532918 K7ENM7 598 aa11.85□□□□□ -0.51
COLCA1-203ENST00000532918 POSTNQ15063 836 aa11.85□□□□□ -0.51
COLCA1-203ENST00000532918 TXNRD1Q16881 649 aa11.85□□□□□ -0.51
COLCA1-203ENST00000532918 MAIP1Q8WWC4 291 aa11.85□□□□□ -0.51
COLCA1-203ENST00000532918 OTUD7AQ8TE49 926 aaPredicted RBP11.84□□□□□ -0.51
COLCA1-203ENST00000532918 SUDS3Q9H7L9 328 aaPredicted RBP11.84□□□□□ -0.51
COLCA1-203ENST00000532918 CAPN9O14815 690 aa11.84□□□□□ -0.51
COLCA1-203ENST00000532918 PTPREP23469 700 aa11.84□□□□□ -0.51
COLCA1-203ENST00000532918 AOC3Q16853 763 aa11.84□□□□□ -0.51
COLCA1-203ENST00000532918 IFNKQ9P0W0 207 aa11.84□□□□□ -0.51
COLCA1-203ENST00000532918 AKT3Q9Y243 479 aa11.84□□□□□ -0.51
COLCA1-203ENST00000532918 LAD1O00515 517 aa11.84□□□□□ -0.51
COLCA1-203ENST00000532918 TUBBP07437 444 aa11.84□□□□□ -0.51
COLCA1-203ENST00000532918 POLR2BP30876 1174 aaKnown RBP11.84□□□□□ -0.51
COLCA1-203ENST00000532918 TBC1D31Q96DN5 1066 aa11.84□□□□□ -0.51
COLCA1-203ENST00000532918 PRIMPOLQ96LW4 560 aa11.84□□□□□ -0.51
COLCA1-203ENST00000532918 RSPH14Q9UHP6 348 aa11.84□□□□□ -0.51
COLCA1-203ENST00000532918 LRRIQ4A6NIV6 560 aa11.84□□□□□ -0.51
COLCA1-203ENST00000532918 CRCPO75575 148 aa11.84□□□□□ -0.51
COLCA1-203ENST00000532918 GCFC2P16383 781 aaKnown RBP11.84□□□□□ -0.51
COLCA1-203ENST00000532918 GBP6Q6ZN66 633 aa11.84□□□□□ -0.51
COLCA1-203ENST00000532918 ZNF365Q70YC5 407 aa11.84□□□□□ -0.51
COLCA1-203ENST00000532918 CEP57Q86XR8 500 aa11.84□□□□□ -0.51
COLCA1-203ENST00000532918 NELFCDQ8IXH7 590 aa11.84□□□□□ -0.51
COLCA1-203ENST00000532918 FAM178BQ8IXR5 827 aa11.84□□□□□ -0.51
COLCA1-203ENST00000532918 TBC1D7Q9P0N9 293 aa11.84□□□□□ -0.51
COLCA1-203ENST00000532918 A0A1B0GUA9 196 aa11.83□□□□□ -0.51
COLCA1-203ENST00000532918 KCNQ4P56696 695 aa11.83□□□□□ -0.51
COLCA1-203ENST00000532918 VPS72Q15906 364 aa11.83□□□□□ -0.51
COLCA1-203ENST00000532918 SYDE2Q5VT97 1194 aa11.83□□□□□ -0.51
COLCA1-203ENST00000532918 MYOCDQ8IZQ8 938 aa11.83□□□□□ -0.51
COLCA1-203ENST00000532918 MICALL1Q8N3F8 863 aa11.83□□□□□ -0.51
COLCA1-203ENST00000532918 MMS19Q96T76 1030 aa11.83□□□□□ -0.51
COLCA1-203ENST00000532918 RPAP1Q9BWH6 1393 aaPredicted RBP11.83□□□□□ -0.52
COLCA1-203ENST00000532918 GNAT1P11488 350 aa11.83□□□□□ -0.52
COLCA1-203ENST00000532918 RNASELQ05823 741 aaKnown RBP11.83□□□□□ -0.52
COLCA1-203ENST00000532918 MAP7D1Q3KQU3 841 aa11.83□□□□□ -0.52
COLCA1-203ENST00000532918 KIAA1841Q6NSI8 718 aa11.83□□□□□ -0.52
COLCA1-203ENST00000532918 SEPT14Q6ZU15 432 aa11.83□□□□□ -0.52
COLCA1-203ENST00000532918 CCDC186Q7Z3E2 898 aa11.83□□□□□ -0.52
COLCA1-203ENST00000532918 SYCE1Q8N0S2 351 aa11.83□□□□□ -0.52
COLCA1-203ENST00000532918 ZFP91Q96JP5 570 aaPredicted RBP11.83□□□□□ -0.52
COLCA1-203ENST00000532918 MAGEF1Q9HAY2 307 aa11.83□□□□□ -0.52
COLCA1-203ENST00000532918 C1orf112Q9NSG2 853 aa11.83□□□□□ -0.52
COLCA1-203ENST00000532918 HOXC10Q9NYD6 342 aa11.83□□□□□ -0.52
COLCA1-203ENST00000532918 CTTNBP2NLQ9P2B4 639 aa11.83□□□□□ -0.52
COLCA1-203ENST00000532918 COL15A1P39059 1388 aa11.83□□□□□ -0.52
COLCA1-203ENST00000532918 PRR36Q9H6K5 1346 aa11.83□□□□□ -0.52
COLCA1-203ENST00000532918 GDF11O95390 407 aa11.83□□□□□ -0.52
COLCA1-203ENST00000532918 COPB2P35606 906 aa11.83□□□□□ -0.52
COLCA1-203ENST00000532918 RC3H1Q5TC82 1133 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms