RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 TROAPQ12815 778 aa9.38□□□□□ -0.91
TRIM49-202ENST00000532501 WTAPQ15007 396 aa9.38□□□□□ -0.91
TRIM49-202ENST00000532501 IFIT1BQ5T764 474 aaKnown RBP9.38□□□□□ -0.91
TRIM49-202ENST00000532501 RUFY3Q7L099 469 aa9.38□□□□□ -0.91
TRIM49-202ENST00000532501 IQCA1Q86XH1 822 aa9.38□□□□□ -0.91
TRIM49-202ENST00000532501 DGKHQ86XP1 1220 aa9.38□□□□□ -0.91
TRIM49-202ENST00000532501 CCDC144CPQ8IYA2 1237 aa9.38□□□□□ -0.91
TRIM49-202ENST00000532501 ZNF654Q8IZM8 581 aa9.38□□□□□ -0.91
TRIM49-202ENST00000532501 ATG4CQ96DT6 458 aa9.38□□□□□ -0.91
TRIM49-202ENST00000532501 ASCC2Q9H1I8 757 aaPredicted RBP9.38□□□□□ -0.91
TRIM49-202ENST00000532501 TXNRD2Q9NNW7 524 aa9.38□□□□□ -0.91
TRIM49-202ENST00000532501 AGTPBP1Q9UPW5 1226 aa9.38□□□□□ -0.91
TRIM49-202ENST00000532501 PDHXO00330 501 aa9.37□□□□□ -0.91
TRIM49-202ENST00000532501 PPFIA3O75145 1194 aa9.37□□□□□ -0.91
TRIM49-202ENST00000532501 CNMDO75829 334 aa9.37□□□□□ -0.91
TRIM49-202ENST00000532501 PLEKHA8P1O95397 391 aa9.37□□□□□ -0.91
TRIM49-202ENST00000532501 CETPP11597 493 aa9.37□□□□□ -0.91
TRIM49-202ENST00000532501 CDC27P30260 824 aa9.37□□□□□ -0.91
TRIM49-202ENST00000532501 AK2P54819 239 aa9.37□□□□□ -0.91
TRIM49-202ENST00000532501 ZNF543Q08ER8 600 aa9.37□□□□□ -0.91
TRIM49-202ENST00000532501 APOA5Q6Q788 366 aa9.37□□□□□ -0.91
TRIM49-202ENST00000532501 SGMS1Q86VZ5 419 aa9.37□□□□□ -0.91
TRIM49-202ENST00000532501 CMTR1Q8N1G2 835 aaKnown RBP9.37□□□□□ -0.91
TRIM49-202ENST00000532501 PROCA1Q8NCQ7 364 aaPredicted RBP9.37□□□□□ -0.91
TRIM49-202ENST00000532501 GMCL1P1Q8NEA9 526 aa9.37□□□□□ -0.91
TRIM49-202ENST00000532501 TMEM87BQ96K49 555 aa9.37□□□□□ -0.91
TRIM49-202ENST00000532501 P2RX7Q99572 595 aaKnown RBP9.37□□□□□ -0.91
TRIM49-202ENST00000532501 GPCPD1Q9NPB8 672 aa9.37□□□□□ -0.91
TRIM49-202ENST00000532501 PDRG1Q9NUG6 133 aa9.37□□□□□ -0.91
TRIM49-202ENST00000532501 LHX6Q9UPM6 363 aa9.37□□□□□ -0.91
TRIM49-202ENST00000532501 WDR19Q8NEZ3 1342 aa9.37□□□□□ -0.91
TRIM49-202ENST00000532501 RLFQ13129 1914 aa9.36□□□□□ -0.91
TRIM49-202ENST00000532501 KLF18A0A0U1RQI7 1052 aa9.36□□□□□ -0.91
TRIM49-202ENST00000532501 SPDYE16A6NNV3 312 aaPredicted RBP9.36□□□□□ -0.91
TRIM49-202ENST00000532501 C19orf81C9J6K1 198 aa9.36□□□□□ -0.91
TRIM49-202ENST00000532501 WDR46O15213 610 aaKnown RBP9.36□□□□□ -0.91
TRIM49-202ENST00000532501 CYTH3O43739 400 aa9.36□□□□□ -0.91
TRIM49-202ENST00000532501 TBC1D8O95759 1140 aa9.36□□□□□ -0.91
TRIM49-202ENST00000532501 LIFRP42702 1097 aa9.36□□□□□ -0.91
TRIM49-202ENST00000532501 NEK4P51957 841 aa9.36□□□□□ -0.91
TRIM49-202ENST00000532501 CRHR2Q13324 411 aa9.36□□□□□ -0.91
TRIM49-202ENST00000532501 CCDC96Q2M329 555 aa9.36□□□□□ -0.91
TRIM49-202ENST00000532501 CATSPERGQ6ZRH7 1159 aa9.36□□□□□ -0.91
TRIM49-202ENST00000532501 ANKRD23Q86SG2 305 aa9.36□□□□□ -0.91
TRIM49-202ENST00000532501 MICU3Q86XE3 530 aa9.36□□□□□ -0.91
TRIM49-202ENST00000532501 REPS2Q8NFH8 660 aa9.36□□□□□ -0.91
TRIM49-202ENST00000532501 GMCL1Q96IK5 515 aa9.36□□□□□ -0.91
TRIM49-202ENST00000532501 TBC1D2Q9BYX2 928 aa9.36□□□□□ -0.91
TRIM49-202ENST00000532501 UBA5Q9GZZ9 404 aa9.36□□□□□ -0.91
TRIM49-202ENST00000532501 KAT14Q9H8E8 782 aa9.36□□□□□ -0.91
TRIM49-202ENST00000532501 NCOA5Q9HCD5 579 aaKnown RBP9.36□□□□□ -0.91
TRIM49-202ENST00000532501 RNF186Q9NXI6 227 aa9.36□□□□□ -0.91
TRIM49-202ENST00000532501 TMOD4Q9NZQ9 345 aa9.36□□□□□ -0.91
TRIM49-202ENST00000532501 BTBD7Q9P203 1132 aa9.36□□□□□ -0.91
TRIM49-202ENST00000532501 MAD2L2Q9UI95 211 aa9.36□□□□□ -0.91
TRIM49-202ENST00000532501 TPCN1Q9ULQ1 816 aa9.36□□□□□ -0.91
TRIM49-202ENST00000532501 CYP46A1Q9Y6A2 500 aa9.36□□□□□ -0.91
TRIM49-202ENST00000532501 MYH4Q9Y623 1939 aa9.35□□□□□ -0.91
TRIM49-202ENST00000532501 GOLGA8BA8MQT2 603 aa9.35□□□□□ -0.91
TRIM49-202ENST00000532501 TMEM232C9JQI7 657 aa9.35□□□□□ -0.91
TRIM49-202ENST00000532501 TRPA1O75762 1119 aa9.35□□□□□ -0.91
TRIM49-202ENST00000532501 ECM2O94769 699 aaPredicted RBP9.35□□□□□ -0.91
TRIM49-202ENST00000532501 BMP3P12645 472 aa9.35□□□□□ -0.91
TRIM49-202ENST00000532501 PSMA5P28066 241 aa9.35□□□□□ -0.91
TRIM49-202ENST00000532501 CTGFP29279 349 aa9.35□□□□□ -0.91
TRIM49-202ENST00000532501 HOXA7P31268 230 aaPredicted RBP9.35□□□□□ -0.91
TRIM49-202ENST00000532501 MAP2K2P36507 400 aa9.35□□□□□ -0.91
TRIM49-202ENST00000532501 SLC1A4P43007 532 aa9.35□□□□□ -0.91
TRIM49-202ENST00000532501 NT5C2P49902 561 aa9.35□□□□□ -0.91
TRIM49-202ENST00000532501 USP14P54578 494 aa9.35□□□□□ -0.91
TRIM49-202ENST00000532501 FUT2Q10981 343 aa9.35□□□□□ -0.91
TRIM49-202ENST00000532501 GRM4Q14833 912 aa9.35□□□□□ -0.91
TRIM49-202ENST00000532501 NUP133Q8WUM0 1156 aa9.35□□□□□ -0.91
TRIM49-202ENST00000532501 LPAR1Q92633 364 aa9.35□□□□□ -0.91
TRIM49-202ENST00000532501 TANGO6Q9C0B7 1094 aa9.35□□□□□ -0.91
TRIM49-202ENST00000532501 WBP1LQ9NX94 342 aa9.35□□□□□ -0.91
TRIM49-202ENST00000532501 CPA4Q9UI42 421 aa9.35□□□□□ -0.91
TRIM49-202ENST00000532501 HTTP42858 3142 aa9.35□□□□□ -0.91
TRIM49-202ENST00000532501 hCG_1642624A0A1W2PR95 340 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 PALM3A6NDB9 673 aaPredicted RBP9.34□□□□□ -0.91
TRIM49-202ENST00000532501 USP17L15C9J2P7 530 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 USP17L13C9JLJ4 530 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 USP17L11C9JVI0 530 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 USP17L18D6R9N7 530 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 USP17L22D6RA61 530 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 USP17L17D6RBQ6 530 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 USP17L19D6RCP7 530 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 USP17L20D6RJB6 530 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 ARHGAP33O14559 1287 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 PPP1R11O60927 126 aaPredicted RBP9.34□□□□□ -0.91
TRIM49-202ENST00000532501 FLOT1O75955 427 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 HSPA1AP0DMV8 641 aaKnown RBP9.34□□□□□ -0.91
TRIM49-202ENST00000532501 HSPA1BP0DMV9 641 aaKnown RBP9.34□□□□□ -0.91
TRIM49-202ENST00000532501 PDIA3P30101 505 aaKnown RBP9.34□□□□□ -0.91
TRIM49-202ENST00000532501 ADD1P35611 737 aaKnown RBP9.34□□□□□ -0.91
TRIM49-202ENST00000532501 EVCP57679 992 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 HERVK_113P62684 666 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 CCT2P78371 535 aaKnown RBP9.34□□□□□ -0.91
TRIM49-202ENST00000532501 USP17L24Q0WX57 530 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 SREBF2Q12772 1141 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms