RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 GPKOWQ92917 476 aaPredicted RBP eCLIP25.35■■□□□ 1.65
PACSIN3-209ENST00000532457 GMCL1Q96IK5 515 aa25.35■■□□□ 1.65
PACSIN3-209ENST00000532457 PIGSQ96S52 555 aa25.35■■□□□ 1.65
PACSIN3-209ENST00000532457 TFIP11Q9UBB9 837 aaKnown RBP25.35■■□□□ 1.65
PACSIN3-209ENST00000532457 MMP1P03956 469 aa25.35■■□□□ 1.65
PACSIN3-209ENST00000532457 NPY5RQ15761 445 aa25.35■■□□□ 1.65
PACSIN3-209ENST00000532457 GPATCH4Q5T3I0 446 aaKnown RBP25.35■■□□□ 1.65
PACSIN3-209ENST00000532457 TYW1BQ6NUM6 668 aa25.35■■□□□ 1.65
PACSIN3-209ENST00000532457 ADGRF4Q8IZF3 695 aa25.35■■□□□ 1.65
PACSIN3-209ENST00000532457 PHF20Q9BVI0 1012 aa25.35■■□□□ 1.65
PACSIN3-209ENST00000532457 JMJD4Q9H9V9 463 aa25.35■■□□□ 1.65
PACSIN3-209ENST00000532457 SYNPO2Q9UMS6 1093 aa25.35■■□□□ 1.65
PACSIN3-209ENST00000532457 TRIM29Q14134 588 aa25.34■■□□□ 1.65
PACSIN3-209ENST00000532457 ZYXQ15942 572 aaKnown RBP25.34■■□□□ 1.65
PACSIN3-209ENST00000532457 OXER1Q8TDS5 423 aa25.34■■□□□ 1.65
PACSIN3-209ENST00000532457 ATP6V1DQ9Y5K8 247 aa25.34■■□□□ 1.65
PACSIN3-209ENST00000532457 BTBD18B2RXH4 712 aa25.33■■□□□ 1.65
PACSIN3-209ENST00000532457 LMBRD1Q9NUN5 540 aa25.33■■□□□ 1.65
PACSIN3-209ENST00000532457 USP17L10C9JJH3 530 aa25.33■■□□□ 1.64
PACSIN3-209ENST00000532457 HSPA6P17066 643 aa25.33■■□□□ 1.64
PACSIN3-209ENST00000532457 U2AF2P26368 475 aaKnown RBP eCLIP25.33■■□□□ 1.64
PACSIN3-209ENST00000532457 WWC2Q6AWC2 1192 aa25.33■■□□□ 1.64
PACSIN3-209ENST00000532457 RGMBQ6NW40 437 aa25.33■■□□□ 1.64
PACSIN3-209ENST00000532457 HOMER1Q86YM7 354 aa25.33■■□□□ 1.64
PACSIN3-209ENST00000532457 CLMNQ96JQ2 1002 aa25.33■■□□□ 1.64
PACSIN3-209ENST00000532457 SNCAIPQ9Y6H5 919 aa25.33■■□□□ 1.64
PACSIN3-209ENST00000532457 OTOFQ9HC10 1997 aa25.32■■□□□ 1.64
PACSIN3-209ENST00000532457 PRPF40AO75400 957 aaKnown RBP25.32■■□□□ 1.64
PACSIN3-209ENST00000532457 PTPRAP18433 802 aa25.32■■□□□ 1.64
PACSIN3-209ENST00000532457 ZNF157P51786 506 aaPredicted RBP25.32■■□□□ 1.64
PACSIN3-209ENST00000532457 DGKZQ13574 1117 aa25.32■■□□□ 1.64
PACSIN3-209ENST00000532457 ERO1BQ86YB8 467 aa25.32■■□□□ 1.64
PACSIN3-209ENST00000532457 RRP36Q96EU6 259 aaKnown RBP25.32■■□□□ 1.64
PACSIN3-209ENST00000532457 VCPKMTQ9H867 229 aa25.32■■□□□ 1.64
PACSIN3-209ENST00000532457 ELP3Q9H9T3 547 aa25.32■■□□□ 1.64
PACSIN3-209ENST00000532457 RBM27Q9P2N5 1060 aaKnown RBP25.32■■□□□ 1.64
PACSIN3-209ENST00000532457 BMP3P12645 472 aa25.31■■□□□ 1.64
PACSIN3-209ENST00000532457 DIS3L2Q8IYB7 885 aaKnown RBP25.31■■□□□ 1.64
PACSIN3-209ENST00000532457 MTMR8Q96EF0 704 aa25.31■■□□□ 1.64
PACSIN3-209ENST00000532457 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.31■■□□□ 1.64
PACSIN3-209ENST00000532457 DOCK1Q14185 1865 aa25.31■■□□□ 1.64
PACSIN3-209ENST00000532457 NR5A1Q13285 461 aa25.3■■□□□ 1.64
PACSIN3-209ENST00000532457 DEFB115Q30KQ5 88 aa25.3■■□□□ 1.64
PACSIN3-209ENST00000532457 CCDC102AQ96A19 550 aa25.3■■□□□ 1.64
PACSIN3-209ENST00000532457 FTOQ9C0B1 505 aaKnown RBP eCLIP25.3■■□□□ 1.64
PACSIN3-209ENST00000532457 GOPCQ9HD26 462 aa25.3■■□□□ 1.64
PACSIN3-209ENST00000532457 ISY1Q9ULR0 285 aaKnown RBP25.3■■□□□ 1.64
PACSIN3-209ENST00000532457 RASSF10A6NK89 507 aa25.3■■□□□ 1.64
PACSIN3-209ENST00000532457 TMEM232C9JQI7 657 aa25.3■■□□□ 1.64
PACSIN3-209ENST00000532457 STXBP3O00186 592 aa25.3■■□□□ 1.64
PACSIN3-209ENST00000532457 PPP1R11O60927 126 aaPredicted RBP25.3■■□□□ 1.64
PACSIN3-209ENST00000532457 NCLP19338 710 aaKnown RBP25.3■■□□□ 1.64
PACSIN3-209ENST00000532457 PPATQ06203 517 aa25.3■■□□□ 1.64
PACSIN3-209ENST00000532457 FAM83BQ5T0W9 1011 aa25.3■■□□□ 1.64
PACSIN3-209ENST00000532457 AS3MTQ9HBK9 375 aa25.3■■□□□ 1.64
PACSIN3-209ENST00000532457 SPDYE5A6NIY4 337 aa25.29■■□□□ 1.64
PACSIN3-209ENST00000532457 HEATR3Q7Z4Q2 680 aa25.29■■□□□ 1.64
PACSIN3-209ENST00000532457 BARHL2Q9NY43 387 aa25.29■■□□□ 1.64
PACSIN3-209ENST00000532457 SNAP25P60880 206 aa25.28■■□□□ 1.64
PACSIN3-209ENST00000532457 BTNL9Q6UXG8 535 aa25.28■■□□□ 1.64
PACSIN3-209ENST00000532457 PAXIP1Q6ZW49 1069 aaPredicted RBP25.28■■□□□ 1.64
PACSIN3-209ENST00000532457 KIAA1683Q9H0B3 1180 aa25.28■■□□□ 1.64
PACSIN3-209ENST00000532457 SH3GLB2Q9NR46 395 aa25.28■■□□□ 1.64
PACSIN3-209ENST00000532457 ZHX2Q9Y6X8 837 aa25.28■■□□□ 1.64
PACSIN3-209ENST00000532457 DDX11L8A8MPP1 907 aa25.28■■□□□ 1.64
PACSIN3-209ENST00000532457 XBP1P17861 261 aa25.28■■□□□ 1.64
PACSIN3-209ENST00000532457 SPP2Q13103 211 aa25.28■■□□□ 1.64
PACSIN3-209ENST00000532457 NOM1Q5C9Z4 860 aaKnown RBP25.28■■□□□ 1.64
PACSIN3-209ENST00000532457 EARS2Q5JPH6 523 aaKnown RBP25.28■■□□□ 1.64
PACSIN3-209ENST00000532457 OPTNQ96CV9 577 aa25.28■■□□□ 1.64
PACSIN3-209ENST00000532457 WDR18Q9BV38 432 aa25.28■■□□□ 1.64
PACSIN3-209ENST00000532457 FIBPO43427 364 aa25.27■■□□□ 1.64
PACSIN3-209ENST00000532457 ZBTB48P10074 688 aaPredicted RBP25.27■■□□□ 1.64
PACSIN3-209ENST00000532457 NLRP5P59047 1200 aa25.27■■□□□ 1.64
PACSIN3-209ENST00000532457 MYSM1Q5VVJ2 828 aa25.27■■□□□ 1.64
PACSIN3-209ENST00000532457 BRAPQ7Z569 592 aa25.27■■□□□ 1.64
PACSIN3-209ENST00000532457 COA7Q96BR5 231 aa25.27■■□□□ 1.64
PACSIN3-209ENST00000532457 OTUD5Q96G74 571 aa25.27■■□□□ 1.64
PACSIN3-209ENST00000532457 USP28Q96RU2 1077 aa25.27■■□□□ 1.64
PACSIN3-209ENST00000532457 FOXP1Q9H334 677 aaPredicted RBP25.27■■□□□ 1.64
PACSIN3-209ENST00000532457 EMILIN3Q9NT22 766 aa25.27■■□□□ 1.64
PACSIN3-209ENST00000532457 PNMA6FA0A0J9YX94 578 aa25.26■■□□□ 1.63
PACSIN3-209ENST00000532457 GADD45BO75293 160 aaPredicted RBP25.26■■□□□ 1.63
PACSIN3-209ENST00000532457 SAFBQ15424 915 aaKnown RBP eCLIP25.26■■□□□ 1.63
PACSIN3-209ENST00000532457 TNFRSF25Q93038 417 aa25.26■■□□□ 1.63
PACSIN3-209ENST00000532457 FEZ1Q99689 392 aa25.26■■□□□ 1.63
PACSIN3-209ENST00000532457 SH2D4AQ9H788 454 aa25.26■■□□□ 1.63
PACSIN3-209ENST00000532457 FAM205CA6NFA0 338 aa25.26■■□□□ 1.63
PACSIN3-209ENST00000532457 KRT85P78386 507 aa25.26■■□□□ 1.63
PACSIN3-209ENST00000532457 CEBPZQ03701 1054 aaKnown RBP25.26■■□□□ 1.63
PACSIN3-209ENST00000532457 PPIL2Q13356 520 aa25.26■■□□□ 1.63
PACSIN3-209ENST00000532457 MTMR2Q13614 643 aa25.26■■□□□ 1.63
PACSIN3-209ENST00000532457 NOSTRINQ8IVI9 506 aa25.26■■□□□ 1.63
PACSIN3-209ENST00000532457 WNK4Q96J92 1243 aa25.26■■□□□ 1.63
PACSIN3-209ENST00000532457 SEC63Q9UGP8 760 aaKnown RBP25.26■■□□□ 1.63
PACSIN3-209ENST00000532457 PHIPQ8WWQ0 1821 aa25.25■■□□□ 1.63
PACSIN3-209ENST00000532457 GOLGA6L22H0YM25 854 aa25.25■■□□□ 1.63
PACSIN3-209ENST00000532457 SYDE2Q5VT97 1194 aa25.25■■□□□ 1.63
PACSIN3-209ENST00000532457 TMEM87AQ8NBN3 555 aa25.25■■□□□ 1.63
PACSIN3-209ENST00000532457 ZNF280CQ8ND82 737 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms