RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 NOX5Q96PH1 765 aa7.96□□□□□ -1.13
CTNND1-229ENST00000531014 DACT1Q9NYF0 836 aa7.96□□□□□ -1.13
CTNND1-229ENST00000531014 TSKSQ9UJT2 592 aa7.96□□□□□ -1.13
CTNND1-229ENST00000531014 IGSF1Q8N6C5 1336 aa7.96□□□□□ -1.13
CTNND1-229ENST00000531014 ASXL1Q8IXJ9 1541 aa7.96□□□□□ -1.13
CTNND1-229ENST00000531014 STX10O60499 249 aa7.96□□□□□ -1.13
CTNND1-229ENST00000531014 CA8P35219 290 aa7.96□□□□□ -1.13
CTNND1-229ENST00000531014 CNPY4Q8N129 248 aa7.96□□□□□ -1.13
CTNND1-229ENST00000531014 PIP4K2CQ8TBX8 421 aa7.96□□□□□ -1.13
CTNND1-229ENST00000531014 VPS37BQ9H9H4 285 aa7.96□□□□□ -1.13
CTNND1-229ENST00000531014 GGA1Q9UJY5 639 aa7.96□□□□□ -1.13
CTNND1-229ENST00000531014 A0A087WUV0 522 aaPredicted RBP7.96□□□□□ -1.14
CTNND1-229ENST00000531014 SUN1O94901 812 aa7.96□□□□□ -1.14
CTNND1-229ENST00000531014 TRPC1P48995 793 aa7.96□□□□□ -1.14
CTNND1-229ENST00000531014 METAP2P50579 478 aaKnown RBP eCLIP7.96□□□□□ -1.14
CTNND1-229ENST00000531014 MRPL28Q13084 256 aaKnown RBP7.96□□□□□ -1.14
CTNND1-229ENST00000531014 PPP2R5DQ14738 602 aa7.96□□□□□ -1.14
CTNND1-229ENST00000531014 NONOQ15233 471 aaKnown RBP eCLIP7.96□□□□□ -1.14
CTNND1-229ENST00000531014 TMTC4Q5T4D3 741 aa7.96□□□□□ -1.14
CTNND1-229ENST00000531014 LIN9Q5TKA1 542 aa7.96□□□□□ -1.14
CTNND1-229ENST00000531014 FLCNQ8NFG4 579 aa7.96□□□□□ -1.14
CTNND1-229ENST00000531014 MRPS26Q9BYN8 205 aaKnown RBP7.96□□□□□ -1.14
CTNND1-229ENST00000531014 HELLSQ9NRZ9 838 aa7.96□□□□□ -1.14
CTNND1-229ENST00000531014 HAUS2Q9NVX0 235 aa7.96□□□□□ -1.14
CTNND1-229ENST00000531014 ANGPTL2Q9UKU9 493 aa7.96□□□□□ -1.14
CTNND1-229ENST00000531014 MED1Q15648 1581 aaPredicted RBP7.96□□□□□ -1.14
CTNND1-229ENST00000531014 MCF2LO15068 1137 aa7.96□□□□□ -1.14
CTNND1-229ENST00000531014 HSPA8P11142 646 aaKnown RBP7.96□□□□□ -1.14
CTNND1-229ENST00000531014 TRAF1Q13077 416 aa7.96□□□□□ -1.14
CTNND1-229ENST00000531014 SNX1Q13596 522 aa7.96□□□□□ -1.14
CTNND1-229ENST00000531014 TAF12Q16514 161 aa7.96□□□□□ -1.14
CTNND1-229ENST00000531014 GLE1Q53GS7 698 aaKnown RBP7.96□□□□□ -1.14
CTNND1-229ENST00000531014 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.96□□□□□ -1.14
CTNND1-229ENST00000531014 MAIP1Q8WWC4 291 aa7.96□□□□□ -1.14
CTNND1-229ENST00000531014 ZNF428Q96B54 188 aa7.96□□□□□ -1.14
CTNND1-229ENST00000531014 JPH2Q9BR39 696 aaPredicted RBP7.96□□□□□ -1.14
CTNND1-229ENST00000531014 RAB17Q9H0T7 212 aa7.96□□□□□ -1.14
CTNND1-229ENST00000531014 CLSTN2Q9H4D0 955 aa7.96□□□□□ -1.14
CTNND1-229ENST00000531014 RRP15Q9Y3B9 282 aaKnown RBP7.96□□□□□ -1.14
CTNND1-229ENST00000531014 NOC2LQ9Y3T9 749 aaKnown RBP7.96□□□□□ -1.14
CTNND1-229ENST00000531014 MAD1L1Q9Y6D9 718 aa7.96□□□□□ -1.14
CTNND1-229ENST00000531014 VWDEQ8N2E2 1590 aa7.96□□□□□ -1.14
CTNND1-229ENST00000531014 FLOT1O75955 427 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 DAB2P98082 770 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 GABPAQ06546 454 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 NBPF20Q3BBV1 942 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 TMEM67Q5HYA8 995 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 CIAPIN1Q6FI81 312 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 ENAHQ8N8S7 591 aaPredicted RBP7.95□□□□□ -1.14
CTNND1-229ENST00000531014 C3P01024 1663 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 GPC4O75487 556 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 MYCNP04198 464 aaPredicted RBP7.95□□□□□ -1.14
CTNND1-229ENST00000531014 SLC5A1P13866 664 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 TNFAIP3P21580 790 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 NCBP1Q09161 790 aaKnown RBP7.95□□□□□ -1.14
CTNND1-229ENST00000531014 RAD51AP2Q09MP3 1159 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 ASPHQ12797 758 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 BRDTQ58F21 947 aaPredicted RBP7.95□□□□□ -1.14
CTNND1-229ENST00000531014 MCTP2Q6DN12 878 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 CASC4Q6P4E1 433 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 SECISBP2LQ93073 1101 aaKnown RBP7.95□□□□□ -1.14
CTNND1-229ENST00000531014 DTNBP1Q96EV8 351 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 SLC26A6Q9BXS9 759 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 SLC24A3Q9HC58 644 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 TSC22D4Q9Y3Q8 395 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 DYTNA2CJ06 578 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 CTNNA1P35221 906 aaKnown RBP7.95□□□□□ -1.14
CTNND1-229ENST00000531014 UBXN2AP68543 259 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 BASP1P80723 227 aaKnown RBP7.95□□□□□ -1.14
CTNND1-229ENST00000531014 IFIT5Q13325 482 aaKnown RBP7.95□□□□□ -1.14
CTNND1-229ENST00000531014 RAPGEF1Q13905 1077 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 CFAP221Q4G0U5 840 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 METTL24Q5JXM2 366 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 CYP26C1Q6V0L0 522 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 SCYL3Q8IZE3 742 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 DACH2Q96NX9 599 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 ARHGAP23Q9P227 1491 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 DAPK3O43293 454 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 GSTA1P08263 222 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 GSTA2P09210 222 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 RPL13P26373 211 aaKnown RBP7.95□□□□□ -1.14
CTNND1-229ENST00000531014 IREB2P48200 963 aaKnown RBP7.95□□□□□ -1.14
CTNND1-229ENST00000531014 CTCFP49711 727 aaPredicted RBP7.95□□□□□ -1.14
CTNND1-229ENST00000531014 C9orf131Q5VYM1 1079 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 VTI1AQ96AJ9 217 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 SLC38A10Q9HBR0 1119 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 IVNS1ABPQ9Y6Y0 642 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 CDC42BPAQ5VT25 1732 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 KIF1BO60333 1816 aa7.95□□□□□ -1.14
CTNND1-229ENST00000531014 TBC1D8O95759 1140 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 SLC8A3P57103 927 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 FSTL1Q12841 308 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 SLC9C1Q4G0N8 1177 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 ZC3H12BQ5HYM0 836 aaKnown RBP7.94□□□□□ -1.14
CTNND1-229ENST00000531014 CCDC197Q8NCU1 140 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 KAT14Q9H8E8 782 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 NSFL1CQ9UNZ2 370 aaKnown RBP7.94□□□□□ -1.14
CTNND1-229ENST00000531014 DEPDC5O75140 1603 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 TMEM232C9JQI7 657 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 PPP1R2P41236 205 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms