RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 GMCL1Q96IK5 515 aa12.36□□□□□ -0.43
SOX6-213ENST00000530378 WNK4Q96J92 1243 aa12.36□□□□□ -0.43
SOX6-213ENST00000530378 RPAP3Q9H6T3 665 aaPredicted RBP12.36□□□□□ -0.43
SOX6-213ENST00000530378 V9GY48 417 aaPredicted RBP12.36□□□□□ -0.43
SOX6-213ENST00000530378 PCNTO95613 3336 aa12.35□□□□□ -0.43
SOX6-213ENST00000530378 FMNL1O95466 1100 aaPredicted RBP12.35□□□□□ -0.43
SOX6-213ENST00000530378 USP14P54578 494 aa12.35□□□□□ -0.43
SOX6-213ENST00000530378 PPATQ06203 517 aa12.35□□□□□ -0.43
SOX6-213ENST00000530378 PPIL2Q13356 520 aa12.35□□□□□ -0.43
SOX6-213ENST00000530378 TRIM22Q8IYM9 498 aa12.35□□□□□ -0.43
SOX6-213ENST00000530378 PIGSQ96S52 555 aa12.35□□□□□ -0.43
SOX6-213ENST00000530378 TMOD4Q9NZQ9 345 aa12.35□□□□□ -0.43
SOX6-213ENST00000530378 RLFQ13129 1914 aa12.35□□□□□ -0.43
SOX6-213ENST00000530378 ZNF157P51786 506 aaPredicted RBP12.34□□□□□ -0.43
SOX6-213ENST00000530378 AKAP17AQ02040 695 aaKnown RBP12.34□□□□□ -0.43
SOX6-213ENST00000530378 GPATCH4Q5T3I0 446 aaKnown RBP12.34□□□□□ -0.43
SOX6-213ENST00000530378 ADGRF4Q8IZF3 695 aa12.34□□□□□ -0.43
SOX6-213ENST00000530378 MAP3K14Q99558 947 aa12.34□□□□□ -0.43
SOX6-213ENST00000530378 LLPHQ9BRT6 129 aaKnown RBP12.34□□□□□ -0.43
SOX6-213ENST00000530378 VPS37CA5D8V6 355 aaPredicted RBP12.34□□□□□ -0.43
SOX6-213ENST00000530378 WDR46O15213 610 aaKnown RBP12.34□□□□□ -0.43
SOX6-213ENST00000530378 FLOT1O75955 427 aa12.34□□□□□ -0.43
SOX6-213ENST00000530378 GNAQP50148 359 aa12.34□□□□□ -0.43
SOX6-213ENST00000530378 STAT2P52630 851 aa12.34□□□□□ -0.43
SOX6-213ENST00000530378 SYDE2Q5VT97 1194 aa12.34□□□□□ -0.43
SOX6-213ENST00000530378 SAPCD2Q86UD0 394 aa12.34□□□□□ -0.43
SOX6-213ENST00000530378 JMYQ8N9B5 988 aa12.34□□□□□ -0.43
SOX6-213ENST00000530378 ALG1Q9BT22 464 aa12.34□□□□□ -0.43
SOX6-213ENST00000530378 JMJD4Q9H9V9 463 aa12.34□□□□□ -0.43
SOX6-213ENST00000530378 A0A0G2JLL6 359 aaPredicted RBP12.33□□□□□ -0.44
SOX6-213ENST00000530378 ABCB7O75027 752 aa12.33□□□□□ -0.44
SOX6-213ENST00000530378 HMGN5P82970 282 aaKnown RBP12.33□□□□□ -0.44
SOX6-213ENST00000530378 PPP2R5BQ15173 497 aa12.33□□□□□ -0.44
SOX6-213ENST00000530378 CCDC174Q6PII3 467 aa12.33□□□□□ -0.44
SOX6-213ENST00000530378 HEATR3Q7Z4Q2 680 aa12.33□□□□□ -0.44
SOX6-213ENST00000530378 PRRT2Q7Z6L0 340 aaPredicted RBP12.33□□□□□ -0.44
SOX6-213ENST00000530378 RASAL3Q86YV0 1011 aa12.33□□□□□ -0.44
SOX6-213ENST00000530378 LPAR1Q92633 364 aa12.33□□□□□ -0.44
SOX6-213ENST00000530378 SPZ1Q9BXG8 430 aa12.33□□□□□ -0.44
SOX6-213ENST00000530378 VPS54Q9P1Q0 977 aa12.33□□□□□ -0.44
SOX6-213ENST00000530378 PRR12Q9ULL5 1215 aa12.33□□□□□ -0.44
SOX6-213ENST00000530378 SYNPO2Q9UMS6 1093 aa12.33□□□□□ -0.44
SOX6-213ENST00000530378 TMEM88BA6NKF7 163 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 C19orf81C9J6K1 198 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 PEX10O60683 326 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 DEXIO95424 95 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 SYT1P21579 422 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 PKN1Q16512 942 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 CDC37Q16543 378 aaPredicted RBP12.32□□□□□ -0.44
SOX6-213ENST00000530378 LARP1BQ659C4 914 aaKnown RBP12.32□□□□□ -0.44
SOX6-213ENST00000530378 SHISA4Q96DD7 197 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 RRP36Q96EU6 259 aaKnown RBP12.32□□□□□ -0.44
SOX6-213ENST00000530378 SLF1Q9BQI6 1058 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 LZTS2Q9BRK4 669 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 RNF26Q9BY78 433 aaPredicted RBP12.32□□□□□ -0.44
SOX6-213ENST00000530378 SEC63Q9UGP8 760 aaKnown RBP12.32□□□□□ -0.44
SOX6-213ENST00000530378 KCNH4Q9UQ05 1017 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 STK36Q9NRP7 1315 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 CCL15-CCL14A0A0B4J2E2 113 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 PRPF3O43395 683 aaKnown RBP12.32□□□□□ -0.44
SOX6-213ENST00000530378 PPP1R11O60927 126 aaPredicted RBP12.32□□□□□ -0.44
SOX6-213ENST00000530378 HTRA3P83110 453 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 SNAPC2Q13487 334 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 CCL15Q16663 113 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 FOXD4L6Q3SYB3 417 aaPredicted RBP12.32□□□□□ -0.44
SOX6-213ENST00000530378 USH1GQ495M9 461 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 SPRYD7Q5W111 196 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 WWC2Q6AWC2 1192 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 RGMBQ6NW40 437 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 FOXD4L3Q6VB84 417 aaPredicted RBP12.32□□□□□ -0.44
SOX6-213ENST00000530378 FERMT3Q86UX7 667 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 ATG4CQ96DT6 458 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 C8orf76Q96K31 380 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 C12orf42Q96LP6 360 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 PCDH10Q9P2E7 1040 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 KCNJ14Q9UNX9 436 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 TLL2Q9Y6L7 1015 aa12.32□□□□□ -0.44
SOX6-213ENST00000530378 H3BQV1 296 aa12.31□□□□□ -0.44
SOX6-213ENST00000530378 SCG2P13521 617 aa12.31□□□□□ -0.44
SOX6-213ENST00000530378 DDIT3P35638 169 aa12.31□□□□□ -0.44
SOX6-213ENST00000530378 FSTL1Q12841 308 aa12.31□□□□□ -0.44
SOX6-213ENST00000530378 MOGSQ13724 837 aa12.31□□□□□ -0.44
SOX6-213ENST00000530378 QRICH1Q2TAL8 776 aa12.31□□□□□ -0.44
SOX6-213ENST00000530378 COA7Q96BR5 231 aa12.31□□□□□ -0.44
SOX6-213ENST00000530378 RIOX1Q9H6W3 641 aa12.31□□□□□ -0.44
SOX6-213ENST00000530378 FEM1BQ9UK73 627 aa12.31□□□□□ -0.44
SOX6-213ENST00000530378 CXCL11O14625 94 aa12.3□□□□□ -0.44
SOX6-213ENST00000530378 PFKFB3Q16875 520 aaPredicted RBP12.3□□□□□ -0.44
SOX6-213ENST00000530378 SH3D19Q5HYK7 790 aa12.3□□□□□ -0.44
SOX6-213ENST00000530378 CYP4F22Q6NT55 531 aa12.3□□□□□ -0.44
SOX6-213ENST00000530378 TYW1BQ6NUM6 668 aa12.3□□□□□ -0.44
SOX6-213ENST00000530378 BRI3BPQ8WY22 251 aa12.3□□□□□ -0.44
SOX6-213ENST00000530378 ZBTB5O15062 677 aa12.3□□□□□ -0.44
SOX6-213ENST00000530378 ADAMTS3O15072 1205 aa12.3□□□□□ -0.44
SOX6-213ENST00000530378 STX6O43752 255 aa12.3□□□□□ -0.44
SOX6-213ENST00000530378 MCTP1Q6DN14 999 aa12.3□□□□□ -0.44
SOX6-213ENST00000530378 BTNL9Q6UXG8 535 aa12.3□□□□□ -0.44
SOX6-213ENST00000530378 CPXCR1Q8N123 301 aa12.3□□□□□ -0.44
SOX6-213ENST00000530378 CHURC1Q8WUH1 139 aa12.3□□□□□ -0.44
SOX6-213ENST00000530378 CHAMP1Q96JM3 812 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms