RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 NOC4LQ9BVI4 516 aaKnown RBP5.42□□□□□ -1.54
ECHDC1-219ENST00000526299 MINPP1Q9UNW1 487 aa5.42□□□□□ -1.54
ECHDC1-219ENST00000526299 PCDHA5Q9Y5H7 936 aa5.42□□□□□ -1.54
ECHDC1-219ENST00000526299 FADS2P1A8MWK0 482 aa5.41□□□□□ -1.54
ECHDC1-219ENST00000526299 NUDT19A8MXV4 375 aa5.41□□□□□ -1.54
ECHDC1-219ENST00000526299 PUM1Q14671 1186 aaKnown RBP eCLIP5.41□□□□□ -1.54
ECHDC1-219ENST00000526299 TAF1CQ15572 869 aaPredicted RBP5.41□□□□□ -1.54
ECHDC1-219ENST00000526299 GALNT18Q6P9A2 607 aa5.41□□□□□ -1.54
ECHDC1-219ENST00000526299 GPR55Q9Y2T6 319 aaPredicted RBP5.41□□□□□ -1.54
ECHDC1-219ENST00000526299 FFAR3O14843 346 aa5.4□□□□□ -1.54
ECHDC1-219ENST00000526299 RGS13O14921 159 aa5.4□□□□□ -1.54
ECHDC1-219ENST00000526299 UBOX5O94941 541 aa5.4□□□□□ -1.54
ECHDC1-219ENST00000526299 NBPF9Q3BBW0 867 aa5.4□□□□□ -1.54
ECHDC1-219ENST00000526299 FCRL2Q96LA5 508 aaPredicted RBP5.4□□□□□ -1.54
ECHDC1-219ENST00000526299 TNFRSF10DQ9UBN6 386 aa5.4□□□□□ -1.54
ECHDC1-219ENST00000526299 TAF6LQ9Y6J9 622 aa5.4□□□□□ -1.54
ECHDC1-219ENST00000526299 WTIPA6NIX2 430 aaPredicted RBP5.39□□□□□ -1.55
ECHDC1-219ENST00000526299 PRAMEF1O95521 474 aa5.39□□□□□ -1.55
ECHDC1-219ENST00000526299 PRKCAP17252 672 aa5.39□□□□□ -1.55
ECHDC1-219ENST00000526299 ARL4AP40617 200 aa5.39□□□□□ -1.55
ECHDC1-219ENST00000526299 LIMS1P48059 325 aa5.39□□□□□ -1.55
ECHDC1-219ENST00000526299 KCNC1P48547 511 aa5.39□□□□□ -1.55
ECHDC1-219ENST00000526299 RNF4P78317 190 aa5.39□□□□□ -1.55
ECHDC1-219ENST00000526299 CEBPAP49715 358 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-219ENST00000526299 ST13P50502 369 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-219ENST00000526299 SLURP1P55000 103 aa5.38□□□□□ -1.55
ECHDC1-219ENST00000526299 CYP4F8P98187 520 aa5.38□□□□□ -1.55
ECHDC1-219ENST00000526299 FAM160A1Q05DH4 1040 aa5.38□□□□□ -1.55
ECHDC1-219ENST00000526299 LAPTM5Q13571 262 aa5.38□□□□□ -1.55
ECHDC1-219ENST00000526299 ARSHQ5FYA8 562 aa5.38□□□□□ -1.55
ECHDC1-219ENST00000526299 NBPF12Q5TAG4 269 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-219ENST00000526299 HHIPL2Q6UWX4 724 aa5.38□□□□□ -1.55
ECHDC1-219ENST00000526299 RPTNQ6XPR3 784 aa5.38□□□□□ -1.55
ECHDC1-219ENST00000526299 SLCO6A1Q86UG4 719 aa5.38□□□□□ -1.55
ECHDC1-219ENST00000526299 ADGRG2Q8IZP9 1017 aa5.38□□□□□ -1.55
ECHDC1-219ENST00000526299 NUP43Q8NFH3 380 aa5.38□□□□□ -1.55
ECHDC1-219ENST00000526299 FBXO27Q8NI29 283 aa5.38□□□□□ -1.55
ECHDC1-219ENST00000526299 RHOVQ96L33 236 aa5.38□□□□□ -1.55
ECHDC1-219ENST00000526299 TNFRSF12AQ9NP84 129 aa5.38□□□□□ -1.55
ECHDC1-219ENST00000526299 ERVK13-1Q9NX77 482 aa5.38□□□□□ -1.55
ECHDC1-219ENST00000526299 SIGLEC6O43699 453 aa5.37□□□□□ -1.55
ECHDC1-219ENST00000526299 CTSHP09668 335 aa5.37□□□□□ -1.55
ECHDC1-219ENST00000526299 RAG1P15918 1043 aa5.37□□□□□ -1.55
ECHDC1-219ENST00000526299 POLR2BP30876 1174 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-219ENST00000526299 TMEM62Q0P6H9 643 aa5.37□□□□□ -1.55
ECHDC1-219ENST00000526299 REC114Q7Z4M0 266 aa5.37□□□□□ -1.55
ECHDC1-219ENST00000526299 GPR20Q99678 358 aa5.37□□□□□ -1.55
ECHDC1-219ENST00000526299 PRDM14Q9GZV8 571 aa5.37□□□□□ -1.55
ECHDC1-219ENST00000526299 PARP2Q9UGN5 583 aa5.37□□□□□ -1.55
ECHDC1-219ENST00000526299 ACSL6Q9UKU0 697 aa5.37□□□□□ -1.55
ECHDC1-219ENST00000526299 USP31Q70CQ4 1352 aa5.37□□□□□ -1.55
ECHDC1-219ENST00000526299 A0A1B0GTL3 188 aa5.36□□□□□ -1.55
ECHDC1-219ENST00000526299 MEIS1O00470 390 aa5.36□□□□□ -1.55
ECHDC1-219ENST00000526299 IGFBP6P24592 240 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-219ENST00000526299 GBP2P32456 591 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-219ENST00000526299 ZNF200P98182 395 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-219ENST00000526299 CBX2Q14781 532 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-219ENST00000526299 PLEKHN1Q494U1 663 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-219ENST00000526299 ZNF512BQ96KM6 892 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-219ENST00000526299 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.36□□□□□ -1.55
ECHDC1-219ENST00000526299 IMPACTQ9P2X3 320 aa5.36□□□□□ -1.55
ECHDC1-219ENST00000526299 MYRFQ9Y2G1 1151 aa5.36□□□□□ -1.55
ECHDC1-219ENST00000526299 IRS2Q9Y4H2 1338 aa5.36□□□□□ -1.55
ECHDC1-219ENST00000526299 K7ESM1 405 aa5.35□□□□□ -1.55
ECHDC1-219ENST00000526299 CAP1Q01518 475 aa5.35□□□□□ -1.55
ECHDC1-219ENST00000526299 MPP2Q14168 576 aa5.35□□□□□ -1.55
ECHDC1-219ENST00000526299 VWA3BQ502W6 1294 aa5.35□□□□□ -1.55
ECHDC1-219ENST00000526299 EAPPQ56P03 285 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-219ENST00000526299 SNAP47Q5SQN1 464 aa5.35□□□□□ -1.55
ECHDC1-219ENST00000526299 ZFYVE27Q5T4F4 411 aa5.35□□□□□ -1.55
ECHDC1-219ENST00000526299 FERMT3Q86UX7 667 aa5.35□□□□□ -1.55
ECHDC1-219ENST00000526299 LSRQ86X29 649 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-219ENST00000526299 RELL1Q8IUW5 271 aa5.35□□□□□ -1.55
ECHDC1-219ENST00000526299 GOLM1Q8NBJ4 401 aa5.35□□□□□ -1.55
ECHDC1-219ENST00000526299 TMEM74Q96NL1 305 aa5.35□□□□□ -1.55
ECHDC1-219ENST00000526299 JMJD8Q96S16 334 aa5.35□□□□□ -1.55
ECHDC1-219ENST00000526299 CDADC1Q9BWV3 514 aa5.35□□□□□ -1.55
ECHDC1-219ENST00000526299 CHST7Q9NS84 486 aa5.35□□□□□ -1.55
ECHDC1-219ENST00000526299 A0A1W2PQ45 241 aaPredicted RBP5.34□□□□□ -1.55
ECHDC1-219ENST00000526299 A0A1W2PQY0 241 aa5.34□□□□□ -1.55
ECHDC1-219ENST00000526299 MINDY4BA8MYZ0 360 aa5.34□□□□□ -1.55
ECHDC1-219ENST00000526299 TLR3O15455 904 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-219ENST00000526299 PLA2G1BP04054 148 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-219ENST00000526299 KCNA1Q09470 495 aa5.34□□□□□ -1.55
ECHDC1-219ENST00000526299 PSMD2Q13200 908 aa5.34□□□□□ -1.55
ECHDC1-219ENST00000526299 UBXN11Q5T124 520 aa5.34□□□□□ -1.55
ECHDC1-219ENST00000526299 NT5DC1Q5TFE4 455 aa5.34□□□□□ -1.55
ECHDC1-219ENST00000526299 ZC3H14Q6PJT7 736 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-219ENST00000526299 NLGN1Q8N2Q7 840 aa5.34□□□□□ -1.55
ECHDC1-219ENST00000526299 TMEM52Q8NDY8 209 aa5.34□□□□□ -1.55
ECHDC1-219ENST00000526299 FAM161BQ96MY7 647 aa5.34□□□□□ -1.55
ECHDC1-219ENST00000526299 SPATA25Q9BR10 227 aa5.34□□□□□ -1.55
ECHDC1-219ENST00000526299 AP5S1Q9NUS5 200 aa5.34□□□□□ -1.55
ECHDC1-219ENST00000526299 SUSD2Q9UGT4 822 aa5.34□□□□□ -1.55
ECHDC1-219ENST00000526299 PLA2G2DQ9UNK4 145 aa5.34□□□□□ -1.55
ECHDC1-219ENST00000526299 HCFC2Q9Y5Z7 792 aa5.34□□□□□ -1.55
ECHDC1-219ENST00000526299 ZNF205O95201 554 aa5.33□□□□□ -1.56
ECHDC1-219ENST00000526299 MSL3P1P0C860 447 aa5.33□□□□□ -1.56
ECHDC1-219ENST00000526299 PFKLP17858 780 aa5.33□□□□□ -1.56
ECHDC1-219ENST00000526299 GARTP22102 1010 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms