RNA–Protein interactions for RNA: ENST00000523543.1

CDK16-221, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2

Gene CDK16, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-221ENST00000523543 FBXO28Q9NVF7 368 aa13.02□□□□□ -0.33
CDK16-221ENST00000523543 MYPNQ86TC9 1320 aa13.02□□□□□ -0.33
CDK16-221ENST00000523543 CNTNAP5Q8WYK1 1306 aa13.02□□□□□ -0.33
CDK16-221ENST00000523543 CEP350Q5VT06 3117 aa13.02□□□□□ -0.33
CDK16-221ENST00000523543 CPLX1O14810 134 aa13.01□□□□□ -0.33
CDK16-221ENST00000523543 CDKL5O76039 1030 aa13.01□□□□□ -0.33
CDK16-221ENST00000523543 HSPA6P17066 643 aa13.01□□□□□ -0.33
CDK16-221ENST00000523543 INHBEP58166 350 aa13.01□□□□□ -0.33
CDK16-221ENST00000523543 PABPC4Q13310 644 aaKnown RBP eCLIP13.01□□□□□ -0.338e-7■■□□□ 12
CDK16-221ENST00000523543 SYDE2Q5VT97 1194 aa13.01□□□□□ -0.33
CDK16-221ENST00000523543 CPLX2Q6PUV4 134 aaKnown RBP13.01□□□□□ -0.33
CDK16-221ENST00000523543 PAXIP1Q6ZW49 1069 aaPredicted RBP13.01□□□□□ -0.33
CDK16-221ENST00000523543 NSUN7Q8NE18 718 aaKnown RBP13.01□□□□□ -0.33
CDK16-221ENST00000523543 SMARCC2Q8TAQ2 1214 aa13.01□□□□□ -0.33
CDK16-221ENST00000523543 MTMR8Q96EF0 704 aa13.01□□□□□ -0.33
CDK16-221ENST00000523543 PTPN18Q99952 460 aa13.01□□□□□ -0.33
CDK16-221ENST00000523543 SLF1Q9BQI6 1058 aa13.01□□□□□ -0.33
CDK16-221ENST00000523543 UBA5Q9GZZ9 404 aa13.01□□□□□ -0.33
CDK16-221ENST00000523543 CPVLQ9H3G5 476 aa13.01□□□□□ -0.33
CDK16-221ENST00000523543 ZCCHC17Q9NP64 241 aaKnown RBP13.01□□□□□ -0.33
CDK16-221ENST00000523543 PPP1R9AQ9ULJ8 1098 aa13.01□□□□□ -0.33
CDK16-221ENST00000523543 ISY1Q9ULR0 285 aaKnown RBP13.01□□□□□ -0.33
CDK16-221ENST00000523543 STK36Q9NRP7 1315 aa13□□□□□ -0.33
CDK16-221ENST00000523543 FLOT1O75955 427 aa13□□□□□ -0.33
CDK16-221ENST00000523543 DSG3P32926 999 aa13□□□□□ -0.33
CDK16-221ENST00000523543 SLC16A2P36021 539 aa13□□□□□ -0.33
CDK16-221ENST00000523543 TM4SF4P48230 202 aa13□□□□□ -0.33
CDK16-221ENST00000523543 HTRA3P83110 453 aa13□□□□□ -0.33
CDK16-221ENST00000523543 SREBF2Q12772 1141 aa13□□□□□ -0.33
CDK16-221ENST00000523543 LBX2Q6XYB7 198 aa13□□□□□ -0.33
CDK16-221ENST00000523543 ADGRF4Q8IZF3 695 aa13□□□□□ -0.33
CDK16-221ENST00000523543 CMTR1Q8N1G2 835 aaKnown RBP13□□□□□ -0.33
CDK16-221ENST00000523543 FAM43AQ8N2R8 423 aa13□□□□□ -0.33
CDK16-221ENST00000523543 PRPF38AQ8NAV1 312 aaKnown RBP13□□□□□ -0.33
CDK16-221ENST00000523543 INTS4Q96HW7 963 aaKnown RBP13□□□□□ -0.33
CDK16-221ENST00000523543 ZIC5Q96T25 663 aa13□□□□□ -0.33
CDK16-221ENST00000523543 RNF26Q9BY78 433 aaPredicted RBP13□□□□□ -0.33
CDK16-221ENST00000523543 ASCC2Q9H1I8 757 aaPredicted RBP13□□□□□ -0.33
CDK16-221ENST00000523543 JMJD4Q9H9V9 463 aa13□□□□□ -0.33
CDK16-221ENST00000523543 PRR12Q9ULL5 1215 aa13□□□□□ -0.33
CDK16-221ENST00000523543 ADAMTS5Q9UNA0 930 aa13□□□□□ -0.33
CDK16-221ENST00000523543 WDR33Q9C0J8 1336 aaKnown RBP12.99□□□□□ -0.33
CDK16-221ENST00000523543 PTPDC1A2A3K4 754 aa12.99□□□□□ -0.33
CDK16-221ENST00000523543 SPDYE16A6NNV3 312 aaPredicted RBP12.99□□□□□ -0.33
CDK16-221ENST00000523543 IGF2BP3O00425 579 aaKnown RBP eCLIP12.99□□□□□ -0.33
CDK16-221ENST00000523543 JAK2O60674 1132 aa12.99□□□□□ -0.33
CDK16-221ENST00000523543 FMNL1O95466 1100 aaPredicted RBP12.99□□□□□ -0.33
CDK16-221ENST00000523543 IRX3P78415 501 aaPredicted RBP12.99□□□□□ -0.33
CDK16-221ENST00000523543 KIF23Q02241 960 aaPredicted RBP12.99□□□□□ -0.33
CDK16-221ENST00000523543 IKQ13123 557 aaPredicted RBP12.99□□□□□ -0.33
CDK16-221ENST00000523543 COG2Q14746 738 aa12.99□□□□□ -0.33
CDK16-221ENST00000523543 IFNL1Q8IU54 200 aa12.99□□□□□ -0.33
CDK16-221ENST00000523543 REM2Q8IYK8 340 aaPredicted RBP12.99□□□□□ -0.33
CDK16-221ENST00000523543 PHKBQ93100 1093 aa12.99□□□□□ -0.33
CDK16-221ENST00000523543 KIFC2Q96AC6 838 aa12.99□□□□□ -0.33
CDK16-221ENST00000523543 ATG4CQ96DT6 458 aa12.99□□□□□ -0.33
CDK16-221ENST00000523543 RANBP17Q9H2T7 1088 aaKnown RBP12.99□□□□□ -0.33
CDK16-221ENST00000523543 HOXC10Q9NYD6 342 aa12.99□□□□□ -0.33
CDK16-221ENST00000523543 RBM27Q9P2N5 1060 aaKnown RBP12.99□□□□□ -0.33
CDK16-221ENST00000523543 PNMA3Q9UL41 463 aa12.99□□□□□ -0.33
CDK16-221ENST00000523543 PCNTO95613 3336 aa12.99□□□□□ -0.33
CDK16-221ENST00000523543 PDHXO00330 501 aa12.98□□□□□ -0.33
CDK16-221ENST00000523543 VWA5AO00534 786 aa12.98□□□□□ -0.33
CDK16-221ENST00000523543 PRPF3O43395 683 aaKnown RBP12.98□□□□□ -0.33
CDK16-221ENST00000523543 AOC2O75106 756 aa12.98□□□□□ -0.33
CDK16-221ENST00000523543 FDX1P10109 184 aa12.98□□□□□ -0.33
CDK16-221ENST00000523543 OSBPP22059 807 aa12.98□□□□□ -0.33
CDK16-221ENST00000523543 VEGFBP49765 207 aa12.98□□□□□ -0.33
CDK16-221ENST00000523543 HERVK_113P62684 666 aa12.98□□□□□ -0.33
CDK16-221ENST00000523543 HMGN5P82970 282 aaKnown RBP12.98□□□□□ -0.33
CDK16-221ENST00000523543 CCDC82Q8N4S0 544 aa12.98□□□□□ -0.33
CDK16-221ENST00000523543 REPS2Q8NFH8 660 aa12.98□□□□□ -0.33
CDK16-221ENST00000523543 SLC38A10Q9HBR0 1119 aa12.98□□□□□ -0.33
CDK16-221ENST00000523543 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.98□□□□□ -0.33
CDK16-221ENST00000523543 ADGRA2Q96PE1 1338 aa12.97□□□□□ -0.33
CDK16-221ENST00000523543 PNMA6FA0A0J9YX94 578 aa12.97□□□□□ -0.33
CDK16-221ENST00000523543 ZBTB5O15062 677 aa12.97□□□□□ -0.33
CDK16-221ENST00000523543 FDPSP14324 419 aaKnown RBP12.97□□□□□ -0.33
CDK16-221ENST00000523543 MAP2K2P36507 400 aa12.97□□□□□ -0.33
CDK16-221ENST00000523543 SSRP1Q08945 709 aaKnown RBP12.97□□□□□ -0.33
CDK16-221ENST00000523543 GRM1Q13255 1194 aa12.97□□□□□ -0.33
CDK16-221ENST00000523543 PKN1Q16512 942 aa12.97□□□□□ -0.33
CDK16-221ENST00000523543 CDC37Q16543 378 aaPredicted RBP12.97□□□□□ -0.33
CDK16-221ENST00000523543 POTEEQ6S8J3 1075 aa12.97□□□□□ -0.33
CDK16-221ENST00000523543 TRIM22Q8IYM9 498 aa12.97□□□□□ -0.33
CDK16-221ENST00000523543 MB21D1Q8N884 522 aa12.97□□□□□ -0.33
CDK16-221ENST00000523543 GTF3C2Q8WUA4 911 aaPredicted RBP12.97□□□□□ -0.33
CDK16-221ENST00000523543 RRP36Q96EU6 259 aaKnown RBP12.97□□□□□ -0.33
CDK16-221ENST00000523543 PIGSQ96S52 555 aa12.97□□□□□ -0.33
CDK16-221ENST00000523543 PARK7Q99497 189 aaKnown RBP12.97□□□□□ -0.33
CDK16-221ENST00000523543 P2RX7Q99572 595 aaKnown RBP12.97□□□□□ -0.33
CDK16-221ENST00000523543 SLC26A6Q9BXS9 759 aa12.97□□□□□ -0.33
CDK16-221ENST00000523543 ORC3Q9UBD5 711 aaPredicted RBP12.97□□□□□ -0.33
CDK16-221ENST00000523543 V9GY48 417 aaPredicted RBP12.97□□□□□ -0.33
CDK16-221ENST00000523543 THSD7BQ9C0I4 1608 aa12.97□□□□□ -0.33
CDK16-221ENST00000523543 RLFQ13129 1914 aa12.96□□□□□ -0.33
CDK16-221ENST00000523543 ZNF536O15090 1300 aa12.96□□□□□ -0.33
CDK16-221ENST00000523543 ATP2A1O14983 1001 aa12.96□□□□□ -0.33
CDK16-221ENST00000523543 PPFIA3O75145 1194 aa12.96□□□□□ -0.33
CDK16-221ENST00000523543 DEXIO95424 95 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms