RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 GGA1Q9UJY5 639 aa8.3□□□□□ -1.08
VPS13B-211ENST00000522802 EYSQ5T1H1 3165 aa8.3□□□□□ -1.08
VPS13B-211ENST00000522802 NEURL1BA8MQ27 555 aa8.29□□□□□ -1.08
VPS13B-211ENST00000522802 NDUFB5O43674 189 aa8.29□□□□□ -1.08
VPS13B-211ENST00000522802 NFKB1P19838 968 aa8.29□□□□□ -1.08
VPS13B-211ENST00000522802 AIMP1Q12904 312 aaKnown RBP8.29□□□□□ -1.08
VPS13B-211ENST00000522802 CRHR2Q13324 411 aa8.29□□□□□ -1.08
VPS13B-211ENST00000522802 TCIRG1Q13488 830 aa8.29□□□□□ -1.08
VPS13B-211ENST00000522802 GPAT2Q6NUI2 795 aa8.29□□□□□ -1.08
VPS13B-211ENST00000522802 LYPD4Q6UWN0 246 aa8.29□□□□□ -1.08
VPS13B-211ENST00000522802 C1orf229Q6ZS94 237 aaPredicted RBP8.29□□□□□ -1.08
VPS13B-211ENST00000522802 KRT25Q7Z3Z0 450 aa8.29□□□□□ -1.08
VPS13B-211ENST00000522802 FCHSD1Q86WN1 690 aa8.29□□□□□ -1.08
VPS13B-211ENST00000522802 PNISRQ8TF01 805 aaKnown RBP8.29□□□□□ -1.08
VPS13B-211ENST00000522802 XAGE3Q8WTP9 111 aa8.29□□□□□ -1.08
VPS13B-211ENST00000522802 FAM89AQ96GI7 184 aa8.29□□□□□ -1.08
VPS13B-211ENST00000522802 CLMNQ96JQ2 1002 aa8.29□□□□□ -1.08
VPS13B-211ENST00000522802 CFAP53Q96M91 514 aa8.29□□□□□ -1.08
VPS13B-211ENST00000522802 ARHGEF15O94989 841 aa8.28□□□□□ -1.08
VPS13B-211ENST00000522802 CELA2BP08218 269 aaPredicted RBP8.28□□□□□ -1.08
VPS13B-211ENST00000522802 EIF2S2P20042 333 aaKnown RBP8.28□□□□□ -1.08
VPS13B-211ENST00000522802 IRS1P35568 1242 aa8.28□□□□□ -1.08
VPS13B-211ENST00000522802 SF3B3Q15393 1217 aaKnown RBP8.28□□□□□ -1.08
VPS13B-211ENST00000522802 LDLRAD1Q5T700 205 aa8.28□□□□□ -1.08
VPS13B-211ENST00000522802 SLCO4C1Q6ZQN7 724 aa8.28□□□□□ -1.08
VPS13B-211ENST00000522802 COPS6Q7L5N1 327 aa8.28□□□□□ -1.08
VPS13B-211ENST00000522802 TNFRSF25Q93038 417 aa8.28□□□□□ -1.08
VPS13B-211ENST00000522802 ERO1AQ96HE7 468 aa8.28□□□□□ -1.08
VPS13B-211ENST00000522802 RBCK1Q9BYM8 510 aa8.28□□□□□ -1.08
VPS13B-211ENST00000522802 ZC3H12CQ9C0D7 883 aaKnown RBP8.28□□□□□ -1.08
VPS13B-211ENST00000522802 ELP3Q9H9T3 547 aa8.28□□□□□ -1.08
VPS13B-211ENST00000522802 PODXL2Q9NZ53 605 aa8.28□□□□□ -1.08
VPS13B-211ENST00000522802 DCTN4Q9UJW0 460 aa8.28□□□□□ -1.08
VPS13B-211ENST00000522802 ANGEL1Q9UNK9 670 aaKnown RBP8.28□□□□□ -1.08
VPS13B-211ENST00000522802 PTCH2Q9Y6C5 1203 aa8.28□□□□□ -1.08
VPS13B-211ENST00000522802 A6NHS1 94 aa8.27□□□□□ -1.09
VPS13B-211ENST00000522802 MANSC4A6NHS7 340 aaPredicted RBP8.27□□□□□ -1.09
VPS13B-211ENST00000522802 WTIPA6NIX2 430 aaPredicted RBP8.27□□□□□ -1.09
VPS13B-211ENST00000522802 ADARB2-AS1A8MUL3 147 aa8.27□□□□□ -1.09
VPS13B-211ENST00000522802 SOX1O00570 391 aaPredicted RBP8.27□□□□□ -1.09
VPS13B-211ENST00000522802 WNT10BO00744 389 aa8.27□□□□□ -1.09
VPS13B-211ENST00000522802 OIP5O43482 229 aa8.27□□□□□ -1.09
VPS13B-211ENST00000522802 IGHA2P01877 340 aa8.27□□□□□ -1.09
VPS13B-211ENST00000522802 RARAP10276 462 aa8.27□□□□□ -1.09
VPS13B-211ENST00000522802 BCRP11274 1271 aa8.27□□□□□ -1.09
VPS13B-211ENST00000522802 NF2P35240 595 aa8.27□□□□□ -1.09
VPS13B-211ENST00000522802 EHHADHQ08426 723 aa8.27□□□□□ -1.09
VPS13B-211ENST00000522802 TRIM26Q12899 539 aaPredicted RBP8.27□□□□□ -1.09
VPS13B-211ENST00000522802 C8orf34Q49A92 452 aa8.27□□□□□ -1.09
VPS13B-211ENST00000522802 HSP90AB3PQ58FF7 597 aa8.27□□□□□ -1.09
VPS13B-211ENST00000522802 ARMC9Q7Z3E5 817 aa8.27□□□□□ -1.09
VPS13B-211ENST00000522802 SHISA4Q96DD7 197 aa8.27□□□□□ -1.09
VPS13B-211ENST00000522802 WNK4Q96J92 1243 aa8.27□□□□□ -1.09
VPS13B-211ENST00000522802 FAM129BQ96TA1 746 aa8.27□□□□□ -1.09
VPS13B-211ENST00000522802 PRO3102Q9H379 93 aa8.27□□□□□ -1.09
VPS13B-211ENST00000522802 SEC31BQ9NQW1 1179 aa8.27□□□□□ -1.09
VPS13B-211ENST00000522802 NUDCQ9Y266 331 aa8.27□□□□□ -1.09
VPS13B-211ENST00000522802 SPTBN5Q9NRC6 3674 aaKnown RBP8.26□□□□□ -1.09
VPS13B-211ENST00000522802 COL1A1P02452 1464 aaPredicted RBP8.26□□□□□ -1.09
VPS13B-211ENST00000522802 MMP20O60882 483 aa8.26□□□□□ -1.09
VPS13B-211ENST00000522802 EPXP11678 715 aa8.26□□□□□ -1.09
VPS13B-211ENST00000522802 RPS8P62241 208 aaKnown RBP8.26□□□□□ -1.09
VPS13B-211ENST00000522802 SLC9C1Q4G0N8 1177 aa8.26□□□□□ -1.09
VPS13B-211ENST00000522802 DACT2Q5SW24 774 aa8.26□□□□□ -1.09
VPS13B-211ENST00000522802 ZNF438Q7Z4V0 828 aa8.26□□□□□ -1.09
VPS13B-211ENST00000522802 TTC16Q8NEE8 873 aa8.26□□□□□ -1.09
VPS13B-211ENST00000522802 TLR7Q9NYK1 1049 aaKnown RBP8.26□□□□□ -1.09
VPS13B-211ENST00000522802 TMEM63CQ9P1W3 806 aa8.26□□□□□ -1.09
VPS13B-211ENST00000522802 TSPYL4Q9UJ04 414 aa8.26□□□□□ -1.09
VPS13B-211ENST00000522802 LAMA2P24043 3122 aaKnown RBP8.26□□□□□ -1.09
VPS13B-211ENST00000522802 ELOA3CA0A087WX78 387 aaPredicted RBP8.25□□□□□ -1.09
VPS13B-211ENST00000522802 ELOA3DA6NLF2 546 aaPredicted RBP8.25□□□□□ -1.09
VPS13B-211ENST00000522802 ZBTB42B2RXF5 422 aa8.25□□□□□ -1.09
VPS13B-211ENST00000522802 ZBTB48P10074 688 aaPredicted RBP8.25□□□□□ -1.09
VPS13B-211ENST00000522802 PPP2R1AP30153 589 aa8.25□□□□□ -1.09
VPS13B-211ENST00000522802 SP3Q02447 781 aa8.25□□□□□ -1.09
VPS13B-211ENST00000522802 KRT24Q2M2I5 525 aa8.25□□□□□ -1.09
VPS13B-211ENST00000522802 SLC4A8Q2Y0W8 1093 aa8.25□□□□□ -1.09
VPS13B-211ENST00000522802 ELOA3BQ3SY89 546 aa8.25□□□□□ -1.09
VPS13B-211ENST00000522802 DHX32Q7L7V1 743 aaKnown RBP8.25□□□□□ -1.09
VPS13B-211ENST00000522802 GALNT6Q8NCL4 622 aa8.25□□□□□ -1.09
VPS13B-211ENST00000522802 ELOA3Q8NG57 546 aa8.25□□□□□ -1.09
VPS13B-211ENST00000522802 OR13H1Q8NG92 308 aa8.25□□□□□ -1.09
VPS13B-211ENST00000522802 SH3TC2Q8TF17 1288 aa8.25□□□□□ -1.09
VPS13B-211ENST00000522802 EDARADDQ8WWZ3 215 aa8.25□□□□□ -1.09
VPS13B-211ENST00000522802 PTPN18Q99952 460 aa8.25□□□□□ -1.09
VPS13B-211ENST00000522802 ISCA1Q9BUE6 129 aa8.25□□□□□ -1.09
VPS13B-211ENST00000522802 ABI2Q9NYB9 513 aaPredicted RBP8.25□□□□□ -1.09
VPS13B-211ENST00000522802 A0A1B0GUL6 1792 aa8.25□□□□□ -1.09
VPS13B-211ENST00000522802 MYH3P11055 1940 aa8.25□□□□□ -1.09
VPS13B-211ENST00000522802 ALPK3Q96L96 1907 aa8.25□□□□□ -1.09
VPS13B-211ENST00000522802 MED23Q9ULK4 1368 aa8.24□□□□□ -1.09
VPS13B-211ENST00000522802 PRUNE2Q8WUY3 3088 aa8.24□□□□□ -1.09
VPS13B-211ENST00000522802 IRS4O14654 1257 aaPredicted RBP8.24□□□□□ -1.09
VPS13B-211ENST00000522802 HOXD8P13378 290 aaPredicted RBP8.24□□□□□ -1.09
VPS13B-211ENST00000522802 MARSP56192 900 aaKnown RBP8.24□□□□□ -1.09
VPS13B-211ENST00000522802 NFE2L2Q16236 605 aa8.24□□□□□ -1.09
VPS13B-211ENST00000522802 TTC39BQ5VTQ0 682 aaPredicted RBP8.24□□□□□ -1.09
VPS13B-211ENST00000522802 APOBEC3FQ8IUX4 373 aaKnown RBP8.24□□□□□ -1.09
VPS13B-211ENST00000522802 PLEKHF1Q96S99 279 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms