RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 U3KQE9 123 aa9.72□□□□□ -0.85
NUDCD1-204ENST00000521439 A0A1W2PQU0 124 aa9.71□□□□□ -0.86
NUDCD1-204ENST00000521439 SIGLEC6O43699 453 aa9.71□□□□□ -0.86
NUDCD1-204ENST00000521439 CEACAM5P06731 702 aa9.71□□□□□ -0.86
NUDCD1-204ENST00000521439 NMIQ13287 307 aaPredicted RBP9.71□□□□□ -0.86
NUDCD1-204ENST00000521439 STK11IPQ8N1F8 1099 aa9.71□□□□□ -0.86
NUDCD1-204ENST00000521439 ARHGEF39Q8N4T4 335 aa9.71□□□□□ -0.86
NUDCD1-204ENST00000521439 ADCY4Q8NFM4 1077 aa9.71□□□□□ -0.86
NUDCD1-204ENST00000521439 ENOX1Q8TC92 643 aaKnown RBP9.71□□□□□ -0.86
NUDCD1-204ENST00000521439 MISP3Q96FF7 219 aa9.71□□□□□ -0.86
NUDCD1-204ENST00000521439 GPR62Q9BZJ7 368 aa9.71□□□□□ -0.86
NUDCD1-204ENST00000521439 KANSL2Q9H9L4 492 aa9.71□□□□□ -0.86
NUDCD1-204ENST00000521439 AKT3Q9Y243 479 aa9.71□□□□□ -0.86
NUDCD1-204ENST00000521439 NOP56O00567 594 aaKnown RBP9.7□□□□□ -0.86
NUDCD1-204ENST00000521439 ITGAVP06756 1048 aa9.7□□□□□ -0.86
NUDCD1-204ENST00000521439 ITIH2P19823 946 aa9.7□□□□□ -0.86
NUDCD1-204ENST00000521439 CANXP27824 592 aaKnown RBP9.7□□□□□ -0.86
NUDCD1-204ENST00000521439 NKPD1Q17RQ9 610 aa9.7□□□□□ -0.86
NUDCD1-204ENST00000521439 LONRF2Q1L5Z9 754 aa9.7□□□□□ -0.86
NUDCD1-204ENST00000521439 ZNF227Q86WZ6 799 aa9.7□□□□□ -0.86
NUDCD1-204ENST00000521439 PLD6Q8N2A8 252 aaKnown RBP9.7□□□□□ -0.86
NUDCD1-204ENST00000521439 FIBCD1Q8N539 461 aa9.7□□□□□ -0.86
NUDCD1-204ENST00000521439 ZBTB38Q8NAP3 1195 aaPredicted RBP9.7□□□□□ -0.86
NUDCD1-204ENST00000521439 NOL6Q9H6R4 1146 aaKnown RBP9.7□□□□□ -0.86
NUDCD1-204ENST00000521439 CHST7Q9NS84 486 aa9.7□□□□□ -0.86
NUDCD1-204ENST00000521439 ST14Q9Y5Y6 855 aa9.7□□□□□ -0.86
NUDCD1-204ENST00000521439 OAS3Q9Y6K5 1087 aaKnown RBP9.7□□□□□ -0.86
NUDCD1-204ENST00000521439 SHISA3A0PJX4 238 aa9.69□□□□□ -0.86
NUDCD1-204ENST00000521439 ENPP3O14638 875 aa9.69□□□□□ -0.86
NUDCD1-204ENST00000521439 ADCY3O60266 1144 aa9.69□□□□□ -0.86
NUDCD1-204ENST00000521439 PRAMEF1O95521 474 aa9.69□□□□□ -0.86
NUDCD1-204ENST00000521439 FAM153BP0C7A2 387 aa9.69□□□□□ -0.86
NUDCD1-204ENST00000521439 SRFP11831 508 aa9.69□□□□□ -0.86
NUDCD1-204ENST00000521439 IFI16Q16666 785 aaKnown RBP9.69□□□□□ -0.86
NUDCD1-204ENST00000521439 CLEC16AQ2KHT3 1053 aa9.69□□□□□ -0.86
NUDCD1-204ENST00000521439 POMZP3Q6PJE2 187 aa9.69□□□□□ -0.86
NUDCD1-204ENST00000521439 CRACR2BQ8N4Y2 399 aaPredicted RBP9.69□□□□□ -0.86
NUDCD1-204ENST00000521439 FLCNQ8NFG4 579 aa9.69□□□□□ -0.86
NUDCD1-204ENST00000521439 DSCC1Q9BVC3 393 aa9.69□□□□□ -0.86
NUDCD1-204ENST00000521439 DUSP15Q9H1R2 295 aaPredicted RBP9.69□□□□□ -0.86
NUDCD1-204ENST00000521439 CGGBP1Q9UFW8 167 aaPredicted RBP9.69□□□□□ -0.86
NUDCD1-204ENST00000521439 SLC5A6Q9Y289 635 aa9.69□□□□□ -0.86
NUDCD1-204ENST00000521439 EMC9Q9Y3B6 208 aa9.69□□□□□ -0.86
NUDCD1-204ENST00000521439 HSD3B2P26439 372 aa9.68□□□□□ -0.86
NUDCD1-204ENST00000521439 SQSTM1Q13501 440 aa9.68□□□□□ -0.86
NUDCD1-204ENST00000521439 HSP90AA2PQ14568 343 aaPredicted RBP9.68□□□□□ -0.86
NUDCD1-204ENST00000521439 SPACA3Q8IXA5 215 aa9.68□□□□□ -0.86
NUDCD1-204ENST00000521439 DAGLBQ8NCG7 672 aa9.68□□□□□ -0.86
NUDCD1-204ENST00000521439 BCL7CQ8WUZ0 217 aaPredicted RBP9.68□□□□□ -0.86
NUDCD1-204ENST00000521439 MRGPRX3Q96LB0 322 aa9.68□□□□□ -0.86
NUDCD1-204ENST00000521439 LGR4Q9BXB1 951 aa9.68□□□□□ -0.86
NUDCD1-204ENST00000521439 HDAC8Q9BY41 377 aa9.68□□□□□ -0.86
NUDCD1-204ENST00000521439 TRIT1Q9H3H1 467 aaKnown RBP9.68□□□□□ -0.86
NUDCD1-204ENST00000521439 GPATCH2Q9NW75 528 aa9.68□□□□□ -0.86
NUDCD1-204ENST00000521439 TMEM260Q9NX78 707 aa9.68□□□□□ -0.86
NUDCD1-204ENST00000521439 PLAGL2Q9UPG8 496 aa9.68□□□□□ -0.86
NUDCD1-204ENST00000521439 SF3B6Q9Y3B4 125 aaKnown RBP9.68□□□□□ -0.86
NUDCD1-204ENST00000521439 TMEM265A0A087WTH1 108 aa9.67□□□□□ -0.86
NUDCD1-204ENST00000521439 ESYT3A0FGR9 886 aa9.67□□□□□ -0.86
NUDCD1-204ENST00000521439 PPP2R2AP63151 447 aa9.67□□□□□ -0.86
NUDCD1-204ENST00000521439 PPP2R5DQ14738 602 aa9.67□□□□□ -0.86
NUDCD1-204ENST00000521439 ZC3H12BQ5HYM0 836 aaKnown RBP9.67□□□□□ -0.86
NUDCD1-204ENST00000521439 CDKAL1Q5VV42 579 aa9.67□□□□□ -0.86
NUDCD1-204ENST00000521439 NFXL1Q6ZNB6 911 aa9.67□□□□□ -0.86
NUDCD1-204ENST00000521439 TRIM59Q8IWR1 403 aa9.67□□□□□ -0.86
NUDCD1-204ENST00000521439 TP53INP2Q8IXH6 220 aa9.67□□□□□ -0.86
NUDCD1-204ENST00000521439 ARHGEF4Q9NR80 690 aa9.67□□□□□ -0.86
NUDCD1-204ENST00000521439 FANCLQ9NW38 375 aa9.67□□□□□ -0.86
NUDCD1-204ENST00000521439 MINPP1Q9UNW1 487 aa9.67□□□□□ -0.86
NUDCD1-204ENST00000521439 PTCH2Q9Y6C5 1203 aa9.67□□□□□ -0.86
NUDCD1-204ENST00000521439 CLCN7P51798 805 aa9.66□□□□□ -0.86
NUDCD1-204ENST00000521439 PRKCQQ04759 706 aa9.66□□□□□ -0.86
NUDCD1-204ENST00000521439 EGFLAMQ63HQ2 1017 aa9.66□□□□□ -0.86
NUDCD1-204ENST00000521439 HOMER1Q86YM7 354 aa9.66□□□□□ -0.86
NUDCD1-204ENST00000521439 ZNF655Q8N720 491 aaPredicted RBP9.66□□□□□ -0.86
NUDCD1-204ENST00000521439 AGBL5Q8NDL9 886 aa9.66□□□□□ -0.86
NUDCD1-204ENST00000521439 ZSWIM2Q8NEG5 633 aa9.66□□□□□ -0.86
NUDCD1-204ENST00000521439 APPBP2Q92624 585 aa9.66□□□□□ -0.86
NUDCD1-204ENST00000521439 HSPA12BQ96MM6 686 aa9.66□□□□□ -0.86
NUDCD1-204ENST00000521439 SLC26A8Q96RN1 970 aa9.66□□□□□ -0.86
NUDCD1-204ENST00000521439 AARSD1Q9BTE6 412 aaKnown RBP9.66□□□□□ -0.86
NUDCD1-204ENST00000521439 VAV3Q9UKW4 847 aa9.66□□□□□ -0.86
NUDCD1-204ENST00000521439 TRAV20A0A0B4J274 112 aa9.65□□□□□ -0.86
NUDCD1-204ENST00000521439 MEIS1O00470 390 aa9.65□□□□□ -0.86
NUDCD1-204ENST00000521439 TBX1O43435 398 aa9.65□□□□□ -0.86
NUDCD1-204ENST00000521439 CDC45O75419 566 aa9.65□□□□□ -0.86
NUDCD1-204ENST00000521439 KCNH1O95259 989 aa9.65□□□□□ -0.86
NUDCD1-204ENST00000521439 CAPNS1P04632 268 aa9.65□□□□□ -0.86
NUDCD1-204ENST00000521439 GSNP06396 782 aa9.65□□□□□ -0.86
NUDCD1-204ENST00000521439 GRB10Q13322 594 aa9.65□□□□□ -0.86
NUDCD1-204ENST00000521439 TSPYL5Q86VY4 417 aaPredicted RBP9.65□□□□□ -0.86
NUDCD1-204ENST00000521439 HRASLS5Q96KN8 279 aa9.65□□□□□ -0.86
NUDCD1-204ENST00000521439 ZDHHC15Q96MV8 337 aa9.65□□□□□ -0.86
NUDCD1-204ENST00000521439 PAK6Q9NQU5 681 aaPredicted RBP9.65□□□□□ -0.86
NUDCD1-204ENST00000521439 SNX11Q9Y5W9 270 aa9.65□□□□□ -0.86
NUDCD1-204ENST00000521439 CLSTN1O94985 981 aa9.64□□□□□ -0.87
NUDCD1-204ENST00000521439 CTSKP43235 329 aa9.64□□□□□ -0.87
NUDCD1-204ENST00000521439 IRAK1P51617 712 aa9.64□□□□□ -0.87
NUDCD1-204ENST00000521439 TMEM67Q5HYA8 995 aa9.64□□□□□ -0.87
NUDCD1-204ENST00000521439 THAP5Q7Z6K1 395 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms