RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 NTRK3Q16288 839 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 NFXL1Q6ZNB6 911 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 CHST3Q7LGC8 479 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 TTC6Q86TZ1 520 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 METTL16Q86W50 562 aaKnown RBP8.38□□□□□ -1.07
MRPS28-205ENST00000519386 RASAL3Q86YV0 1011 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 TRIM22Q8IYM9 498 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 ANKRD13AQ8IZ07 590 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 ZNF654Q8IZM8 581 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 CRACR2BQ8N4Y2 399 aaPredicted RBP8.38□□□□□ -1.07
MRPS28-205ENST00000519386 DNAJC5GQ8N7S2 189 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 ENAHQ8N8S7 591 aaPredicted RBP8.38□□□□□ -1.07
MRPS28-205ENST00000519386 FBXO18Q8NFZ0 1043 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 ANKS1AQ92625 1134 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 ZKSCAN4Q969J2 545 aaPredicted RBP8.38□□□□□ -1.07
MRPS28-205ENST00000519386 CAPNS2Q96L46 248 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 ZSCAN10Q96SZ4 725 aaPredicted RBP8.38□□□□□ -1.07
MRPS28-205ENST00000519386 DNAJC18Q9H819 358 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 ELP3Q9H9T3 547 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 NCOA5Q9HCD5 579 aaKnown RBP8.38□□□□□ -1.07
MRPS28-205ENST00000519386 TCP11L1Q9NUJ3 509 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 HERC5Q9UII4 1024 aaKnown RBP8.38□□□□□ -1.07
MRPS28-205ENST00000519386 ZNF112Q9UJU3 913 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 CFAP45Q9UL16 551 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 SNCAIPQ9Y6H5 919 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 DOCK1Q14185 1865 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 ATAD5Q96QE3 1844 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 GRXCR2A6NFK2 248 aa8.37□□□□□ -1.07
MRPS28-205ENST00000519386 MINDY4BA8MYZ0 360 aa8.37□□□□□ -1.07
MRPS28-205ENST00000519386 FAM155AB1AL88 458 aaPredicted RBP8.37□□□□□ -1.07
MRPS28-205ENST00000519386 AOC2O75106 756 aa8.37□□□□□ -1.07
MRPS28-205ENST00000519386 PRPF40AO75400 957 aaKnown RBP8.37□□□□□ -1.07
MRPS28-205ENST00000519386 FMNL1O95466 1100 aaPredicted RBP8.37□□□□□ -1.07
MRPS28-205ENST00000519386 SLC10A3P09131 477 aa8.37□□□□□ -1.07
MRPS28-205ENST00000519386 FDPSP14324 419 aaKnown RBP8.37□□□□□ -1.07
MRPS28-205ENST00000519386 DEKP35659 375 aaKnown RBP8.37□□□□□ -1.07
MRPS28-205ENST00000519386 GJA5P36382 358 aa8.37□□□□□ -1.07
MRPS28-205ENST00000519386 ECE1P42892 770 aa8.37□□□□□ -1.07
MRPS28-205ENST00000519386 CCT2P78371 535 aaKnown RBP8.37□□□□□ -1.07
MRPS28-205ENST00000519386 RRP1BQ14684 758 aaKnown RBP8.37□□□□□ -1.07
MRPS28-205ENST00000519386 RTN1Q16799 776 aa8.37□□□□□ -1.07
MRPS28-205ENST00000519386 C16orf86Q6ZW13 317 aa8.37□□□□□ -1.07
MRPS28-205ENST00000519386 MICU3Q86XE3 530 aa8.37□□□□□ -1.07
MRPS28-205ENST00000519386 DGKHQ86XP1 1220 aa8.37□□□□□ -1.07
MRPS28-205ENST00000519386 FOXP4Q8IVH2 680 aaPredicted RBP8.37□□□□□ -1.07
MRPS28-205ENST00000519386 SLC44A5Q8NCS7 719 aa8.37□□□□□ -1.07
MRPS28-205ENST00000519386 SLC10A4Q96EP9 437 aa8.37□□□□□ -1.07
MRPS28-205ENST00000519386 DYNLL2Q96FJ2 89 aa8.37□□□□□ -1.07
MRPS28-205ENST00000519386 C8orf76Q96K31 380 aa8.37□□□□□ -1.07
MRPS28-205ENST00000519386 RNF26Q9BY78 433 aaPredicted RBP8.37□□□□□ -1.07
MRPS28-205ENST00000519386 TRIM34Q9BYJ4 488 aa8.37□□□□□ -1.07
MRPS28-205ENST00000519386 EHD4Q9H223 541 aa8.37□□□□□ -1.07
MRPS28-205ENST00000519386 TOMM22Q9NS69 142 aa8.37□□□□□ -1.07
MRPS28-205ENST00000519386 ORC3Q9UBD5 711 aaPredicted RBP8.37□□□□□ -1.07
MRPS28-205ENST00000519386 SERPINB13Q9UIV8 391 aa8.37□□□□□ -1.07
MRPS28-205ENST00000519386 CSADQ9Y600 493 aa8.37□□□□□ -1.07
MRPS28-205ENST00000519386 TACC3Q9Y6A5 838 aa8.37□□□□□ -1.07
MRPS28-205ENST00000519386 UNCXA6NJT0 531 aa8.36□□□□□ -1.07
MRPS28-205ENST00000519386 BHMG1C9JSJ3 638 aaPredicted RBP8.36□□□□□ -1.07
MRPS28-205ENST00000519386 DEXIO95424 95 aa8.36□□□□□ -1.07
MRPS28-205ENST00000519386 OSBPP22059 807 aa8.36□□□□□ -1.07
MRPS28-205ENST00000519386 SHMT1P34896 483 aa8.36□□□□□ -1.07
MRPS28-205ENST00000519386 DNM1Q05193 864 aaKnown RBP8.36□□□□□ -1.07
MRPS28-205ENST00000519386 GABPAQ06546 454 aa8.36□□□□□ -1.07
MRPS28-205ENST00000519386 SHROOM1Q2M3G4 852 aaPredicted RBP8.36□□□□□ -1.07
MRPS28-205ENST00000519386 RRP12Q5JTH9 1297 aaKnown RBP8.36□□□□□ -1.07
MRPS28-205ENST00000519386 NOL9Q5SY16 702 aaKnown RBP8.36□□□□□ -1.07
MRPS28-205ENST00000519386 IFIT1BQ5T764 474 aaKnown RBP8.36□□□□□ -1.07
MRPS28-205ENST00000519386 SPRYD7Q5W111 196 aa8.36□□□□□ -1.07
MRPS28-205ENST00000519386 CATIPQ7Z7H3 387 aa8.36□□□□□ -1.07
MRPS28-205ENST00000519386 FANCBQ8NB91 859 aa8.36□□□□□ -1.07
MRPS28-205ENST00000519386 GPT2Q8TD30 523 aa8.36□□□□□ -1.07
MRPS28-205ENST00000519386 CCDC102AQ96A19 550 aa8.36□□□□□ -1.07
MRPS28-205ENST00000519386 DDX11Q96FC9 970 aa8.36□□□□□ -1.07
MRPS28-205ENST00000519386 WNK4Q96J92 1243 aa8.36□□□□□ -1.07
MRPS28-205ENST00000519386 ZNF396Q96N95 335 aaPredicted RBP8.36□□□□□ -1.07
MRPS28-205ENST00000519386 ZIC5Q96T25 663 aa8.36□□□□□ -1.07
MRPS28-205ENST00000519386 FAM217BQ9NTX9 383 aaPredicted RBP8.36□□□□□ -1.07
MRPS28-205ENST00000519386 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.36□□□□□ -1.07
MRPS28-205ENST00000519386 NAP1L2Q9ULW6 460 aaPredicted RBP8.36□□□□□ -1.07
MRPS28-205ENST00000519386 CNPY2Q9Y2B0 182 aa8.36□□□□□ -1.07
MRPS28-205ENST00000519386 MORC2Q9Y6X9 1032 aaPredicted RBP8.36□□□□□ -1.07
MRPS28-205ENST00000519386 THSD7BQ9C0I4 1608 aa8.36□□□□□ -1.07
MRPS28-205ENST00000519386 GOLGA6L3A6NEY3 463 aa8.35□□□□□ -1.07
MRPS28-205ENST00000519386 SPDYE5A6NIY4 337 aa8.35□□□□□ -1.07
MRPS28-205ENST00000519386 TSPY2A6NKD2 308 aa8.35□□□□□ -1.07
MRPS28-205ENST00000519386 MAP3K7O43318 606 aa8.35□□□□□ -1.07
MRPS28-205ENST00000519386 FIBPO43427 364 aa8.35□□□□□ -1.07
MRPS28-205ENST00000519386 RANBP6O60518 1105 aaKnown RBP8.35□□□□□ -1.07
MRPS28-205ENST00000519386 CTNND1O60716 968 aaKnown RBP8.35□□□□□ -1.07
MRPS28-205ENST00000519386 LETM1O95202 739 aaPredicted RBP8.35□□□□□ -1.07
MRPS28-205ENST00000519386 GDF11O95390 407 aa8.35□□□□□ -1.07
MRPS28-205ENST00000519386 YEATS4O95619 227 aa8.35□□□□□ -1.07
MRPS28-205ENST00000519386 CDC27P30260 824 aa8.35□□□□□ -1.07
MRPS28-205ENST00000519386 KIF5BP33176 963 aa8.35□□□□□ -1.07
MRPS28-205ENST00000519386 NOVP48745 357 aa8.35□□□□□ -1.07
MRPS28-205ENST00000519386 MRE11P49959 708 aa8.35□□□□□ -1.07
MRPS28-205ENST00000519386 JAG1P78504 1218 aa8.35□□□□□ -1.07
MRPS28-205ENST00000519386 SSRP1Q08945 709 aaKnown RBP8.35□□□□□ -1.07
MRPS28-205ENST00000519386 TROAPQ12815 778 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms