RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 GIGYF2Q6Y7W6 1299 aaKnown RBP12.06□□□□□ -0.48
PCDHGA1-202ENST00000517417 METTL16Q86W50 562 aaKnown RBP12.06□□□□□ -0.48
PCDHGA1-202ENST00000517417 SNX29Q8TEQ0 813 aa12.06□□□□□ -0.48
PCDHGA1-202ENST00000517417 NELFBQ8WX92 580 aa12.06□□□□□ -0.48
PCDHGA1-202ENST00000517417 SELENOOQ9BVL4 669 aa12.06□□□□□ -0.48
PCDHGA1-202ENST00000517417 TNKSO95271 1327 aa12.06□□□□□ -0.48
PCDHGA1-202ENST00000517417 TOPAZ1Q8N9V7 1692 aa12.06□□□□□ -0.48
PCDHGA1-202ENST00000517417 NR5A1Q13285 461 aa12.06□□□□□ -0.48
PCDHGA1-202ENST00000517417 PDIA6Q15084 440 aa12.06□□□□□ -0.48
PCDHGA1-202ENST00000517417 IFT81Q8WYA0 676 aa12.06□□□□□ -0.48
PCDHGA1-202ENST00000517417 MKRN1Q9UHC7 482 aaKnown RBP12.06□□□□□ -0.48
PCDHGA1-202ENST00000517417 MAP3K15Q6ZN16 1313 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 FMNL1O95466 1100 aaPredicted RBP12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 RNASE9P60153 205 aaKnown RBP12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 LARGE2Q8N3Y3 721 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 JAKMIP2Q96AA8 810 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 PLVAPQ9BX97 442 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 RABEP2Q9H5N1 569 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 ABCB6Q9NP58 842 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 SEC31BQ9NQW1 1179 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 STK32BQ9NY57 414 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 AXIN2Q9Y2T1 843 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 GOLGA8HP0CJ92 632 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 EEF2P13639 858 aaKnown RBP12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 PLCB3Q01970 1234 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 ATG9AQ7Z3C6 839 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 GPATCH11Q8N954 259 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 FAM71BQ8TC56 605 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 CARD10Q9BWT7 1032 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 IMPG2Q9BZV3 1241 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 THRAP3Q9Y2W1 955 aaKnown RBP12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 PCDHB6Q9Y5E3 794 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 ATP2C2O75185 946 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 MMP1P03956 469 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 PRR29P0C7W0 189 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 HARSP12081 509 aaKnown RBP12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 POLD1P28340 1107 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 MNAT1P51948 309 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 MSL1Q68DK7 614 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 CYB5R4Q7L1T6 521 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 TBC1D10CQ8IV04 446 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 PANX2Q96RD6 677 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 DNAI2Q9GZS0 605 aa12.05□□□□□ -0.48
PCDHGA1-202ENST00000517417 RPL13P26373 211 aaKnown RBP12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 ADD2P35612 726 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 PRKG1Q13976 671 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 MTF1Q14872 753 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 SYMPKQ92797 1274 aaKnown RBP12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 EEF2KMTQ96G04 330 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 TUBE1Q9UJT0 475 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 FAM170AA1A519 330 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 OPA1O60313 960 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 CFBP00751 764 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 CDC27P30260 824 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 CRKLP46109 303 aaKnown RBP12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 MORC3Q14149 939 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 PPP2R5BQ15173 497 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 KCNJ18B7U540 433 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 H0YIN7 160 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 KCNJ12Q14500 433 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 NCAPH2Q6IBW4 605 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 NELFCDQ8IXH7 590 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 IRX2Q9BZI1 471 aaPredicted RBP12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 FOXP1Q9H334 677 aaPredicted RBP12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 FAM204AQ9H8W3 233 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 ZNF446Q9NWS9 450 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 DCCP43146 1447 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 GOLGA6CA6NDK9 693 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 DDX39AO00148 427 aaKnown RBP12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 GOLGA6DP0CG33 693 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 FOXO4P98177 505 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 UBE3CQ15386 1083 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 REXO1L1PQ8IX06 675 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 REXO1Q8N1G1 1221 aaKnown RBP12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 MPHOSPH6Q99547 160 aaKnown RBP12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 HOMER2Q9NSB8 354 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 GOLGA6AQ9NYA3 693 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 BIN2Q9UBW5 565 aaPredicted RBP12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 SAR1BQ9Y6B6 198 aa12.04□□□□□ -0.48
PCDHGA1-202ENST00000517417 MYO1CO00159 1063 aa12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 SCNN1DP51172 638 aa12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 ADCY7P51828 1080 aa12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 ILDR1Q86SU0 546 aaPredicted RBP12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 TICAM2Q86XR7 235 aa12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 USP40Q9NVE5 1235 aa12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 SMCO2A6NFE2 343 aa12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 APBA3O96018 575 aa12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 MAP3K9P80192 1104 aa12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 CNNM4Q6P4Q7 775 aa12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 KIAA0825Q8IV33 1275 aa12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 PNMA1Q8ND90 353 aa12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 PPM1EQ8WY54 764 aa12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 ZSCAN10Q96SZ4 725 aaPredicted RBP12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 XRN1Q8IZH2 1706 aaKnown RBP12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 TLDC2A0PJX2 215 aa12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 ENC1O14682 589 aa12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 CASP8Q14790 479 aa12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 NCAPHQ15003 741 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms