RNA–Protein interactions for RNA: ENST00000517400.5

LINC00534-201, long intergenic non-protein coding RNA 534, humanhuman

TSL 2 BASIC

Gene LINC00534, Length 793 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-201ENST00000517400 FGD4Q96M96 766 aa6.48□□□□□ -1.37
LINC00534-201ENST00000517400 GPR62Q9BZJ7 368 aa6.48□□□□□ -1.37
LINC00534-201ENST00000517400 PRR19A6NJB7 356 aa6.47□□□□□ -1.37
LINC00534-201ENST00000517400 RBAK-RBAKDNI3L0D1 243 aa6.47□□□□□ -1.37
LINC00534-201ENST00000517400 AGRPO00253 132 aa6.47□□□□□ -1.37
LINC00534-201ENST00000517400 SIGLEC6O43699 453 aa6.47□□□□□ -1.37
LINC00534-201ENST00000517400 SMARCA5O60264 1052 aaPredicted RBP6.47□□□□□ -1.37
LINC00534-201ENST00000517400 SRFP11831 508 aa6.47□□□□□ -1.37
LINC00534-201ENST00000517400 ZNF445P59923 1031 aa6.47□□□□□ -1.37
LINC00534-201ENST00000517400 SNW1Q13573 536 aaKnown RBP6.47□□□□□ -1.37
LINC00534-201ENST00000517400 NKPD1Q17RQ9 610 aa6.47□□□□□ -1.37
LINC00534-201ENST00000517400 SV2CQ496J9 727 aa6.47□□□□□ -1.37
LINC00534-201ENST00000517400 ADAT2Q7Z6V5 191 aaKnown RBP6.47□□□□□ -1.37
LINC00534-201ENST00000517400 JAZF1Q86VZ6 243 aa6.47□□□□□ -1.37
LINC00534-201ENST00000517400 SYTL5Q8TDW5 730 aaPredicted RBP6.47□□□□□ -1.37
LINC00534-201ENST00000517400 PIM2Q9P1W9 311 aa6.47□□□□□ -1.37
LINC00534-201ENST00000517400 DIS3Q9Y2L1 958 aaKnown RBP6.47□□□□□ -1.37
LINC00534-201ENST00000517400 LEMD3Q9Y2U8 911 aa6.47□□□□□ -1.37
LINC00534-201ENST00000517400 ST14Q9Y5Y6 855 aa6.47□□□□□ -1.37
LINC00534-201ENST00000517400 FHOD1Q9Y613 1164 aa6.47□□□□□ -1.37
LINC00534-201ENST00000517400 U3KQE9 123 aa6.47□□□□□ -1.37
LINC00534-201ENST00000517400 NUP160Q12769 1436 aa6.47□□□□□ -1.37
LINC00534-201ENST00000517400 TSPOAP1O95153 1857 aa6.47□□□□□ -1.37
LINC00534-201ENST00000517400 FAM155AB1AL88 458 aaPredicted RBP6.46□□□□□ -1.38
LINC00534-201ENST00000517400 CYP26A1O43174 497 aa6.46□□□□□ -1.38
LINC00534-201ENST00000517400 CEACAM5P06731 702 aa6.46□□□□□ -1.38
LINC00534-201ENST00000517400 FOSL1P15407 271 aa6.46□□□□□ -1.38
LINC00534-201ENST00000517400 NMIQ13287 307 aaPredicted RBP6.46□□□□□ -1.38
LINC00534-201ENST00000517400 NOL9Q5SY16 702 aaKnown RBP6.46□□□□□ -1.38
LINC00534-201ENST00000517400 ARHGAP27Q6ZUM4 889 aa6.46□□□□□ -1.38
LINC00534-201ENST00000517400 TMC3Q7Z5M5 1100 aa6.46□□□□□ -1.38
LINC00534-201ENST00000517400 LRRC47Q8N1G4 583 aaKnown RBP6.46□□□□□ -1.38
LINC00534-201ENST00000517400 ARHGEF39Q8N4T4 335 aa6.46□□□□□ -1.38
LINC00534-201ENST00000517400 BVESQ8NE79 360 aa6.46□□□□□ -1.38
LINC00534-201ENST00000517400 RNPC3Q96LT9 517 aaKnown RBP6.46□□□□□ -1.38
LINC00534-201ENST00000517400 SPATA9Q9BWV2 254 aa6.46□□□□□ -1.38
LINC00534-201ENST00000517400 ASCC2Q9H1I8 757 aaPredicted RBP6.46□□□□□ -1.38
LINC00534-201ENST00000517400 DUSP15Q9H1R2 295 aaPredicted RBP6.46□□□□□ -1.38
LINC00534-201ENST00000517400 LRRC4CQ9HCJ2 640 aa6.46□□□□□ -1.38
LINC00534-201ENST00000517400 APEX2Q9UBZ4 518 aa6.46□□□□□ -1.38
LINC00534-201ENST00000517400 PFDN2Q9UHV9 154 aa6.46□□□□□ -1.38
LINC00534-201ENST00000517400 KDM2BQ8NHM5 1336 aa6.46□□□□□ -1.38
LINC00534-201ENST00000517400 DIAPH1O60610 1272 aaKnown RBP6.45□□□□□ -1.38
LINC00534-201ENST00000517400 SSRP1Q08945 709 aaKnown RBP6.45□□□□□ -1.38
LINC00534-201ENST00000517400 LONRF2Q1L5Z9 754 aa6.45□□□□□ -1.38
LINC00534-201ENST00000517400 SPACA3Q8IXA5 215 aa6.45□□□□□ -1.38
LINC00534-201ENST00000517400 FAM181AQ8N9Y4 354 aa6.45□□□□□ -1.38
LINC00534-201ENST00000517400 LRRN4CLQ8ND94 238 aa6.45□□□□□ -1.38
LINC00534-201ENST00000517400 NETO1Q8TDF5 533 aa6.45□□□□□ -1.38
LINC00534-201ENST00000517400 THAP3Q8WTV1 239 aaPredicted RBP6.45□□□□□ -1.38
LINC00534-201ENST00000517400 TRIT1Q9H3H1 467 aaKnown RBP6.45□□□□□ -1.38
LINC00534-201ENST00000517400 CHST7Q9NS84 486 aa6.45□□□□□ -1.38
LINC00534-201ENST00000517400 GFOD1Q9NXC2 390 aa6.45□□□□□ -1.38
LINC00534-201ENST00000517400 PLAGL2Q9UPG8 496 aa6.45□□□□□ -1.38
LINC00534-201ENST00000517400 SUGT1Q9Y2Z0 365 aa6.45□□□□□ -1.38
LINC00534-201ENST00000517400 EMC9Q9Y3B6 208 aa6.45□□□□□ -1.38
LINC00534-201ENST00000517400 SNX11Q9Y5W9 270 aa6.45□□□□□ -1.38
LINC00534-201ENST00000517400 MRPL42Q9Y6G3 142 aaKnown RBP6.45□□□□□ -1.38
LINC00534-201ENST00000517400 KIF13AQ9H1H9 1805 aa6.45□□□□□ -1.38
LINC00534-201ENST00000517400 KDM6BO15054 1643 aa6.44□□□□□ -1.38
LINC00534-201ENST00000517400 A0A1W2PQU0 124 aa6.44□□□□□ -1.38
LINC00534-201ENST00000517400 SHISA3A0PJX4 238 aa6.44□□□□□ -1.38
LINC00534-201ENST00000517400 NOP56O00567 594 aaKnown RBP6.44□□□□□ -1.38
LINC00534-201ENST00000517400 PRAMEF1O95521 474 aa6.44□□□□□ -1.38
LINC00534-201ENST00000517400 CAPNS1P04632 268 aa6.44□□□□□ -1.38
LINC00534-201ENST00000517400 ITGAVP06756 1048 aa6.44□□□□□ -1.38
LINC00534-201ENST00000517400 CLCN7P51798 805 aa6.44□□□□□ -1.38
LINC00534-201ENST00000517400 IFI16Q16666 785 aaKnown RBP6.44□□□□□ -1.38
LINC00534-201ENST00000517400 C2orf27AQ580R0 203 aa6.44□□□□□ -1.38
LINC00534-201ENST00000517400 PRSS36Q5K4E3 855 aa6.44□□□□□ -1.38
LINC00534-201ENST00000517400 POMZP3Q6PJE2 187 aa6.44□□□□□ -1.38
LINC00534-201ENST00000517400 NLGN1Q8N2Q7 840 aa6.44□□□□□ -1.38
LINC00534-201ENST00000517400 CRACR2BQ8N4Y2 399 aaPredicted RBP6.44□□□□□ -1.38
LINC00534-201ENST00000517400 ZNF655Q8N720 491 aaPredicted RBP6.44□□□□□ -1.38
LINC00534-201ENST00000517400 DAGLBQ8NCG7 672 aa6.44□□□□□ -1.38
LINC00534-201ENST00000517400 SH3TC2Q8TF17 1288 aa6.44□□□□□ -1.38
LINC00534-201ENST00000517400 BRF1Q92994 677 aa6.44□□□□□ -1.38
LINC00534-201ENST00000517400 MRGPRX3Q96LB0 322 aa6.44□□□□□ -1.38
LINC00534-201ENST00000517400 HDAC8Q9BY41 377 aa6.44□□□□□ -1.38
LINC00534-201ENST00000517400 GPATCH2Q9NW75 528 aa6.44□□□□□ -1.38
LINC00534-201ENST00000517400 LRP2BPQ9P2M1 347 aa6.44□□□□□ -1.38
LINC00534-201ENST00000517400 ZC3H7BQ9UGR2 993 aaKnown RBP6.44□□□□□ -1.38
LINC00534-201ENST00000517400 AKT3Q9Y243 479 aa6.44□□□□□ -1.38
LINC00534-201ENST00000517400 ABCC10Q5T3U5 1492 aa6.43□□□□□ -1.38
LINC00534-201ENST00000517400 ADCY3O60266 1144 aa6.43□□□□□ -1.38
LINC00534-201ENST00000517400 ITIH2P19823 946 aa6.43□□□□□ -1.38
LINC00534-201ENST00000517400 HSP90AA2PQ14568 343 aaPredicted RBP6.43□□□□□ -1.38
LINC00534-201ENST00000517400 ZC3H12BQ5HYM0 836 aaKnown RBP6.43□□□□□ -1.38
LINC00534-201ENST00000517400 CDKAL1Q5VV42 579 aa6.43□□□□□ -1.38
LINC00534-201ENST00000517400 SDE2Q6IQ49 451 aa6.43□□□□□ -1.38
LINC00534-201ENST00000517400 THAP5Q7Z6K1 395 aa6.43□□□□□ -1.38
LINC00534-201ENST00000517400 PLD6Q8N2A8 252 aaKnown RBP6.43□□□□□ -1.38
LINC00534-201ENST00000517400 FIBCD1Q8N539 461 aa6.43□□□□□ -1.38
LINC00534-201ENST00000517400 ZBTB38Q8NAP3 1195 aaPredicted RBP6.43□□□□□ -1.38
LINC00534-201ENST00000517400 HSPA12BQ96MM6 686 aa6.43□□□□□ -1.38
LINC00534-201ENST00000517400 DSCC1Q9BVC3 393 aa6.43□□□□□ -1.38
LINC00534-201ENST00000517400 NOL6Q9H6R4 1146 aaKnown RBP6.43□□□□□ -1.38
LINC00534-201ENST00000517400 CGGBP1Q9UFW8 167 aaPredicted RBP6.43□□□□□ -1.38
LINC00534-201ENST00000517400 SF3B6Q9Y3B4 125 aaKnown RBP6.43□□□□□ -1.38
LINC00534-201ENST00000517400 ERICH3Q5RHP9 1530 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms